RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C HOG1P32485 435 aa10.64□□□□□ -0.71
BDF1YLR399C CRH1P53301 507 aa10.64□□□□□ -0.71
BDF1YLR399C ATG39Q06159 398 aa10.64□□□□□ -0.71
BDF1YLR399C YOR105WQ08504 108 aa10.64□□□□□ -0.71
BDF1YLR399C USV1Q12132 391 aa10.64□□□□□ -0.71
BDF1YLR399C CUP9P41817 306 aa10.64□□□□□ -0.71
BDF1YLR399C ZIM17P42844 174 aa10.64□□□□□ -0.71
BDF1YLR399C TRI1Q05024 226 aa10.64□□□□□ -0.71
BDF1YLR399C YCR024C-BQ3E7Z8 88 aa10.64□□□□□ -0.71
BDF1YLR399C NOP1P15646 327 aaKnown RBP10.63□□□□□ -0.71
BDF1YLR399C PAM17P36147 197 aa10.63□□□□□ -0.71
BDF1YLR399C TEM1P38987 245 aa10.63□□□□□ -0.71
BDF1YLR399C RPA43P46669 326 aa10.63□□□□□ -0.71
BDF1YLR399C YMR166CQ03829 368 aa10.63□□□□□ -0.71
BDF1YLR399C ARR3Q06598 404 aa10.63□□□□□ -0.71
BDF1YLR399C MTR2P34232 184 aaKnown RBP10.62□□□□□ -0.71
BDF1YLR399C YGR269WP40326 108 aa10.62□□□□□ -0.71
BDF1YLR399C GPI2P46961 280 aa10.62□□□□□ -0.71
BDF1YLR399C FRE8Q12209 686 aa10.62□□□□□ -0.71
BDF1YLR399C SCS22Q6Q595 175 aa10.62□□□□□ -0.71
BDF1YLR399C MES1P00958 751 aaKnown RBP10.62□□□□□ -0.71
BDF1YLR399C QCR9P22289 66 aa10.62□□□□□ -0.71
BDF1YLR399C LYS1P38998 373 aaRIP-Chip data10.62□□□□□ -0.71not detected
BDF1YLR399C YND1P40009 630 aa10.62□□□□□ -0.71
BDF1YLR399C YMR007WQ03675 126 aa10.62□□□□□ -0.71
BDF1YLR399C YBR255C-AQ3E776 120 aa10.62□□□□□ -0.71
BDF1YLR399C CNL1Q06333 122 aa10.61□□□□□ -0.71
BDF1YLR399C PAM18Q07914 168 aa10.61□□□□□ -0.71
BDF1YLR399C YPR108W-AQ3E7B3 70 aa10.61□□□□□ -0.71
BDF1YLR399C MBF1O14467 151 aaKnown RBP10.61□□□□□ -0.71
BDF1YLR399C RPS22AP0C0W1 130 aaKnown RBP10.61□□□□□ -0.71
BDF1YLR399C IMG1P25626 169 aa10.61□□□□□ -0.71
BDF1YLR399C RPB7P34087 171 aa10.61□□□□□ -0.71
BDF1YLR399C LSM2P38203 95 aaKnown RBP10.61□□□□□ -0.71
BDF1YLR399C TUB4P53378 473 aa10.61□□□□□ -0.71
BDF1YLR399C HED1Q03937 162 aa10.61□□□□□ -0.71
BDF1YLR399C YPR174CQ06616 221 aaPredicted RBP10.61□□□□□ -0.71
BDF1YLR399C CSM4Q08955 156 aa10.61□□□□□ -0.71
BDF1YLR399C SMT3Q12306 101 aaKnown RBP10.61□□□□□ -0.71
BDF1YLR399C ABM1P47146 123 aa10.6□□□□□ -0.71
BDF1YLR399C YPL162CQ12042 273 aa10.6□□□□□ -0.71
BDF1YLR399C MED6P38782 295 aa10.59□□□□□ -0.71
BDF1YLR399C IRC19Q07843 230 aa10.59□□□□□ -0.71
BDF1YLR399C YLR050CQ12155 161 aaKnown RBP10.59□□□□□ -0.71
BDF1YLR399C HAA1Q12753 694 aaKnown RBP10.59□□□□□ -0.71
BDF1YLR399C SRP14P38985 146 aa10.59□□□□□ -0.71
BDF1YLR399C SSU72P53538 206 aaPredicted RBP10.59□□□□□ -0.71
BDF1YLR399C YDR102CQ03864 110 aa10.59□□□□□ -0.71
BDF1YLR399C ADH6Q04894 360 aaKnown RBP10.59□□□□□ -0.71
BDF1YLR399C LOA1Q06508 300 aa10.59□□□□□ -0.71
BDF1YLR399C SLO1Q3E784 85 aa10.59□□□□□ -0.71
BDF1YLR399C AIM17P23180 465 aaKnown RBP10.58□□□□□ -0.72
BDF1YLR399C RPI1P23250 407 aaKnown RBP10.58□□□□□ -0.72
BDF1YLR399C ARO2P28777 376 aaKnown RBP10.58□□□□□ -0.72
BDF1YLR399C YBL059WP34224 193 aa10.58□□□□□ -0.72
BDF1YLR399C YDR286CQ05530 114 aa10.58□□□□□ -0.72
BDF1YLR399C ALG6Q12001 544 aaKnown RBP10.58□□□□□ -0.72
BDF1YLR399C SEC11P15367 167 aa10.57□□□□□ -0.72
BDF1YLR399C BAT1P38891 393 aaKnown RBP10.57□□□□□ -0.72
BDF1YLR399C UME6P39001 836 aa10.57□□□□□ -0.72
BDF1YLR399C YIL163CP40448 117 aa10.57□□□□□ -0.72
BDF1YLR399C HAC1P41546 238 aa10.57□□□□□ -0.72
BDF1YLR399C CTK2P46962 323 aa10.57□□□□□ -0.72
BDF1YLR399C YGL230CP53074 147 aa10.57□□□□□ -0.72
BDF1YLR399C YHM2Q04013 314 aa10.57□□□□□ -0.72
BDF1YLR399C NAG1Q8TGN9 163 aa10.57□□□□□ -0.72
BDF1YLR399C FCY2P17064 533 aa10.57□□□□□ -0.72
BDF1YLR399C YCK3P39962 524 aa10.57□□□□□ -0.72
BDF1YLR399C OSW5P40219 148 aa10.57□□□□□ -0.72
BDF1YLR399C SOD1P00445 154 aaKnown RBP10.56□□□□□ -0.72
BDF1YLR399C YCR007CP25354 239 aa10.56□□□□□ -0.72
BDF1YLR399C PHD1P36093 366 aa10.56□□□□□ -0.72
BDF1YLR399C XPT1P47165 209 aa10.56□□□□□ -0.72
BDF1YLR399C SEI1Q06058 285 aa10.56□□□□□ -0.72
BDF1YLR399C YPR147CQ06522 304 aaKnown RBP10.56□□□□□ -0.72
BDF1YLR399C YOL029CQ08187 201 aa10.56□□□□□ -0.72
BDF1YLR399C GEP5Q12393 293 aa10.56□□□□□ -0.72
BDF1YLR399C MXR2P25566 168 aa10.56□□□□□ -0.72
BDF1YLR399C YBR184WP38299 523 aa10.56□□□□□ -0.72
BDF1YLR399C YGR017WP53210 297 aa10.56□□□□□ -0.72
BDF1YLR399C CDC36P06100 191 aaPredicted RBP10.55□□□□□ -0.72
BDF1YLR399C HMX1P32339 317 aa10.55□□□□□ -0.72
BDF1YLR399C FMO1P38866 432 aa10.55□□□□□ -0.72
BDF1YLR399C DFG10P40526 253 aa10.55□□□□□ -0.72
BDF1YLR399C MSL1P40567 111 aaPredicted RBP10.55□□□□□ -0.72
BDF1YLR399C CUP2P15315 225 aa10.54□□□□□ -0.72
BDF1YLR399C ANB1P19211 157 aa10.54□□□□□ -0.72
BDF1YLR399C YJL193WP39542 402 aa10.54□□□□□ -0.72
BDF1YLR399C PAI3P01094 68 aa10.54□□□□□ -0.72
BDF1YLR399C YKL107WP34251 309 aa10.54□□□□□ -0.72
BDF1YLR399C GEP7P53171 287 aa10.54□□□□□ -0.72
BDF1YLR399C OPI10Q08202 246 aa10.54□□□□□ -0.72
BDF1YLR399C YOL118CQ08259 102 aa10.54□□□□□ -0.72
BDF1YLR399C YOR186WQ08560 144 aa10.54□□□□□ -0.72
BDF1YLR399C SEC24P40482 926 aaKnown RBP10.53□□□□□ -0.72
BDF1YLR399C MSY1P48527 492 aa10.53□□□□□ -0.72
BDF1YLR399C PRP11Q07350 266 aaPredicted RBP10.53□□□□□ -0.72
BDF1YLR399C SEC4P07560 215 aaKnown RBP10.53□□□□□ -0.72
BDF1YLR399C YBR090CP38253 122 aa10.53□□□□□ -0.72
BDF1YLR399C DER1P38307 211 aa10.53□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms