RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C MRS3P10566 314 aa2.84□□□□□ -1.95
SGN1YIR001C ROX3P25046 220 aa2.84□□□□□ -1.95
SGN1YIR001C ALK2P32789 676 aaPredicted RBP2.84□□□□□ -1.95
SGN1YIR001C ATG18P43601 500 aa2.84□□□□□ -1.95
SGN1YIR001C YFR035CP43608 114 aa2.84□□□□□ -1.95
SGN1YIR001C YAE1P47118 141 aaPredicted RBP2.84□□□□□ -1.95
SGN1YIR001C ILM1P47155 203 aa2.84□□□□□ -1.95
SGN1YIR001C UBP8P50102 471 aa2.84□□□□□ -1.95
SGN1YIR001C CPD1P53314 239 aa2.84□□□□□ -1.95
SGN1YIR001C ERV25P54837 211 aaKnown RBP2.84□□□□□ -1.95
SGN1YIR001C MAK3Q03503 176 aa2.84□□□□□ -1.95
SGN1YIR001C TDA1Q03533 586 aa2.84□□□□□ -1.95
SGN1YIR001C PEX10Q05568 337 aa2.84□□□□□ -1.95
SGN1YIR001C RRG8Q06109 277 aa2.84□□□□□ -1.95
SGN1YIR001C YOR292CQ08743 309 aa2.84□□□□□ -1.95
SGN1YIR001C URA3P03962 267 aa2.83□□□□□ -1.96
SGN1YIR001C NOP1P15646 327 aaKnown RBP2.83□□□□□ -1.96
SGN1YIR001C YMR31P19955 123 aa2.83□□□□□ -1.96
SGN1YIR001C YPS1P32329 569 aa2.83□□□□□ -1.96
SGN1YIR001C NRG2P38082 220 aa2.83□□□□□ -1.96
SGN1YIR001C YNL194CP40169 301 aa2.83□□□□□ -1.96
SGN1YIR001C YIL060WP40519 144 aa2.83□□□□□ -1.96
SGN1YIR001C YGR210CP42942 411 aa2.83□□□□□ -1.96
SGN1YIR001C AGX1P43567 385 aa2.83□□□□□ -1.96
SGN1YIR001C CAX4P53223 239 aa2.83□□□□□ -1.96
SGN1YIR001C VHT1P53241 593 aa2.83□□□□□ -1.96
SGN1YIR001C ERV29P53337 310 aa2.83□□□□□ -1.96
SGN1YIR001C YNR071CP53757 342 aa2.83□□□□□ -1.96
SGN1YIR001C MEH1Q02205 184 aa2.83□□□□□ -1.96
SGN1YIR001C YMR130WQ04223 302 aa2.83□□□□□ -1.96
SGN1YIR001C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
SGN1YIR001C HRD1Q08109 551 aa2.83□□□□□ -1.96
SGN1YIR001C TMA17Q12513 150 aa2.83□□□□□ -1.96
SGN1YIR001C YPR108W-AQ3E7B3 70 aa2.83□□□□□ -1.96
SGN1YIR001C VMA8P32610 256 aaKnown RBP2.82□□□□□ -1.96
SGN1YIR001C AGA2P32781 87 aa2.82□□□□□ -1.96
SGN1YIR001C PDC2P32896 925 aa2.82□□□□□ -1.96
SGN1YIR001C RIB7P33312 244 aa2.82□□□□□ -1.96
SGN1YIR001C SRL3P36167 246 aa2.82□□□□□ -1.96
SGN1YIR001C QDR3P38227 689 aa2.82□□□□□ -1.96
SGN1YIR001C MED8P38304 223 aa2.82□□□□□ -1.96
SGN1YIR001C MIC12P38341 106 aa2.82□□□□□ -1.96
SGN1YIR001C YPT31P38555 223 aaKnown RBP2.82□□□□□ -1.96
SGN1YIR001C BNA6P43619 295 aa2.82□□□□□ -1.96
SGN1YIR001C RPA34P47006 233 aaPredicted RBP2.82□□□□□ -1.96
SGN1YIR001C DIE2P50076 525 aa2.82□□□□□ -1.96
SGN1YIR001C ALG13P53178 202 aa2.82□□□□□ -1.96
SGN1YIR001C YGR042WP53227 271 aa2.82□□□□□ -1.96
SGN1YIR001C FSH2Q05015 223 aa2.82□□□□□ -1.96
SGN1YIR001C IRC23Q08416 157 aa2.82□□□□□ -1.96
SGN1YIR001C YNG1Q08465 219 aa2.82□□□□□ -1.96
SGN1YIR001C CRC1Q12289 327 aa2.82□□□□□ -1.96
SGN1YIR001C MED4Q12343 284 aa2.82□□□□□ -1.96
SGN1YIR001C HUG1Q6Q5K6 68 aa2.82□□□□□ -1.96
SGN1YIR001C VPS63O13549 108 aa2.81□□□□□ -1.96
SGN1YIR001C CHO1P08456 276 aa2.81□□□□□ -1.96
SGN1YIR001C CDC23P16522 626 aa2.81□□□□□ -1.96
SGN1YIR001C SEN2P16658 377 aa2.81□□□□□ -1.96
SGN1YIR001C SEC66P33754 206 aa2.81□□□□□ -1.96
SGN1YIR001C ATP3P38077 311 aaKnown RBP2.81□□□□□ -1.96
SGN1YIR001C IMD2P38697 523 aaKnown RBP2.81□□□□□ -1.96
SGN1YIR001C YER137CP40083 148 aaKnown RBP2.81□□□□□ -1.96
SGN1YIR001C LST8P41318 303 aa2.81□□□□□ -1.96
SGN1YIR001C YPI1P43587 155 aa2.81□□□□□ -1.96
SGN1YIR001C YGR219WP53307 113 aa2.81□□□□□ -1.96
SGN1YIR001C GIM3P53900 129 aa2.81□□□□□ -1.96
SGN1YIR001C YML018CQ03730 393 aa2.81□□□□□ -1.96
SGN1YIR001C RDS3Q06835 107 aaPredicted RBP2.81□□□□□ -1.96
SGN1YIR001C UBA3Q99344 299 aa2.81□□□□□ -1.96
SGN1YIR001C MDN1Q12019 4910 aaKnown RBP2.81□□□□□ -1.96
SGN1YIR001C PET494P07390 489 aaPredicted RBP2.8□□□□□ -1.96
SGN1YIR001C RPL3P14126 387 aaKnown RBP2.8□□□□□ -1.96
SGN1YIR001C TRR1P29509 319 aaKnown RBP2.8□□□□□ -1.96
SGN1YIR001C RNP1P32385 249 aa2.8□□□□□ -1.96
SGN1YIR001C POP2P39008 433 aa2.8□□□□□ -1.96
SGN1YIR001C PCL6P40038 420 aa2.8□□□□□ -1.96
SGN1YIR001C PDS1P40316 373 aaPredicted RBP2.8□□□□□ -1.96
SGN1YIR001C YJL218WP40892 196 aaKnown RBP2.8□□□□□ -1.96
SGN1YIR001C OTU1P43558 301 aa2.8□□□□□ -1.96
SGN1YIR001C SSU72P53538 206 aaPredicted RBP2.8□□□□□ -1.96
SGN1YIR001C SWT21P53873 357 aaPredicted RBP2.8□□□□□ -1.96
SGN1YIR001C COX12Q01519 83 aa2.8□□□□□ -1.96
SGN1YIR001C GRX3Q03835 250 aa2.8□□□□□ -1.96
SGN1YIR001C YLR031WQ07978 186 aa2.8□□□□□ -1.96
SGN1YIR001C ATG41Q12048 136 aa2.8□□□□□ -1.96
SGN1YIR001C ATG31Q12421 196 aa2.8□□□□□ -1.96
SGN1YIR001C BOL1Q3E793 110 aa2.8□□□□□ -1.96
SGN1YIR001C YER175W-AQ8TGU4 54 aa2.8□□□□□ -1.96
SGN1YIR001C RPL24BP24000 155 aaKnown RBP2.79□□□□□ -1.96
SGN1YIR001C DOG2P38773 246 aa2.79□□□□□ -1.96
SGN1YIR001C DOG1P38774 246 aa2.79□□□□□ -1.96
SGN1YIR001C LSM12P38828 187 aaKnown RBP2.79□□□□□ -1.96
SGN1YIR001C ARO8P53090 500 aaKnown RBP2.79□□□□□ -1.96
SGN1YIR001C GIS2P53849 153 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
SGN1YIR001C FYV6P53913 173 aa2.79□□□□□ -1.96
SGN1YIR001C VBA1Q04301 562 aa2.79□□□□□ -1.96
SGN1YIR001C TAR1Q8TGM6 124 aa2.79□□□□□ -1.96
SGN1YIR001C COQ3P27680 312 aa2.78□□□□□ -1.96
SGN1YIR001C HOM6P31116 359 aaKnown RBP2.78□□□□□ -1.96
SGN1YIR001C MST28P39552 234 aa2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 76.1 ms