RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C YDR274CP87283 123 aa2.86□□□□□ -1.95
SPB4YFL002C SPG3Q04398 127 aaPredicted RBP2.86□□□□□ -1.95
SPB4YFL002C YPR202WQ08993 238 aa2.86□□□□□ -1.95
SPB4YFL002C DGK1Q12382 290 aa2.86□□□□□ -1.95
SPB4YFL002C YIL177CP40434 1758 aa2.86□□□□□ -1.95
SPB4YFL002C YJL225CP40889 1758 aa2.86□□□□□ -1.95
SPB4YFL002C PBI2P0CT04 75 aaKnown RBP2.86□□□□□ -1.95
SPB4YFL002C RSA4P25382 515 aaKnown RBP2.86□□□□□ -1.95
SPB4YFL002C YER134CP40081 178 aa2.86□□□□□ -1.95
SPB4YFL002C MNN5P46982 586 aa2.86□□□□□ -1.95
SPB4YFL002C PKR1Q03880 122 aaKnown RBP2.86□□□□□ -1.95
SPB4YFL002C YLR412C-AQ3E742 68 aa2.86□□□□□ -1.95
SPB4YFL002C ODC2Q99297 307 aa2.86□□□□□ -1.95
SPB4YFL002C IDP1P21954 428 aaKnown RBP2.85□□□□□ -1.95
SPB4YFL002C AGA2P32781 87 aa2.85□□□□□ -1.95
SPB4YFL002C GIM4P40005 111 aaKnown RBP2.85□□□□□ -1.95
SPB4YFL002C THI74Q04083 370 aa2.85□□□□□ -1.95
SPB4YFL002C NAT3Q06504 195 aa2.85□□□□□ -1.95
SPB4YFL002C DAS2Q12084 232 aa2.85□□□□□ -1.95
SPB4YFL002C PAN3P36102 679 aaPredicted RBP2.84□□□□□ -1.95
SPB4YFL002C CSH1P38287 376 aa2.84□□□□□ -1.95
SPB4YFL002C UMP1P38293 148 aa2.84□□□□□ -1.95
SPB4YFL002C YFL019CP43576 117 aa2.84□□□□□ -1.95
SPB4YFL002C NEJ1Q06148 342 aa2.84□□□□□ -1.95
SPB4YFL002C YAR023CD6VPM8 179 aa2.84□□□□□ -1.96
SPB4YFL002C CPA1P07258 411 aaKnown RBP2.84□□□□□ -1.96
SPB4YFL002C PEX34P25584 144 aa2.84□□□□□ -1.96
SPB4YFL002C IPI1P38803 334 aaPredicted RBP2.84□□□□□ -1.96
SPB4YFL002C VTC1P40046 129 aaRIP-Chip data2.84□□□□□ -1.96not detected
SPB4YFL002C PGD1P40356 397 aa2.84□□□□□ -1.96
SPB4YFL002C YGR042WP53227 271 aa2.84□□□□□ -1.96
SPB4YFL002C LSM3P57743 89 aaKnown RBP2.84□□□□□ -1.96
SPB4YFL002C RPL2AP0CX45 254 aaKnown RBP2.83□□□□□ -1.96
SPB4YFL002C RPL2BP0CX46 254 aaKnown RBP2.83□□□□□ -1.96
SPB4YFL002C KRE1P17260 313 aa2.83□□□□□ -1.96
SPB4YFL002C YHR180WP38868 163 aa2.83□□□□□ -1.96
SPB4YFL002C FCY21P40039 528 aa2.83□□□□□ -1.96
SPB4YFL002C APQ12P40532 138 aa2.83□□□□□ -1.96
SPB4YFL002C SNC2P33328 115 aa2.82□□□□□ -1.96
SPB4YFL002C YHL026CP38740 315 aa2.82□□□□□ -1.96
SPB4YFL002C YGL204CP53089 101 aa2.82□□□□□ -1.96
SPB4YFL002C VPS71Q03433 280 aa2.82□□□□□ -1.96
SPB4YFL002C RPL26AP05743 127 aaKnown RBP2.82□□□□□ -1.96
SPB4YFL002C FMT1P32785 401 aa2.82□□□□□ -1.96
SPB4YFL002C YBR285WP38354 144 aa2.82□□□□□ -1.96
SPB4YFL002C CYC2P38909 366 aa2.82□□□□□ -1.96
SPB4YFL002C RPL26BP53221 127 aaKnown RBP2.82□□□□□ -1.96
SPB4YFL002C ORM1P53224 222 aa2.82□□□□□ -1.96
SPB4YFL002C YMR099CQ03161 297 aaKnown RBP2.82□□□□□ -1.96
SPB4YFL002C RAV2Q03956 351 aa2.82□□□□□ -1.96
SPB4YFL002C YNL200CP40165 246 aaKnown RBP2.81□□□□□ -1.96
SPB4YFL002C DLS1P40366 167 aa2.81□□□□□ -1.96
SPB4YFL002C DOC1P53068 250 aa2.81□□□□□ -1.96
SPB4YFL002C YPR195CQ06594 109 aa2.81□□□□□ -1.96
SPB4YFL002C FSF1Q12029 327 aaKnown RBP2.81□□□□□ -1.96
SPB4YFL002C YOR1P53049 1477 aa2.8□□□□□ -1.96
SPB4YFL002C POR1P04840 283 aaKnown RBP2.8□□□□□ -1.96
SPB4YFL002C EAF6P47128 113 aa2.8□□□□□ -1.96
SPB4YFL002C YGR219WP53307 113 aa2.8□□□□□ -1.96
SPB4YFL002C HHT1P61830 136 aa2.8□□□□□ -1.96
SPB4YFL002C STP22P25604 385 aa2.79□□□□□ -1.96
SPB4YFL002C YGR201CP42936 225 aa2.79□□□□□ -1.96
SPB4YFL002C RBL2P48606 106 aaKnown RBP2.79□□□□□ -1.96
SPB4YFL002C ATO3Q12359 275 aa2.79□□□□□ -1.96
SPB4YFL002C FKS1P38631 1876 aaKnown RBP2.79□□□□□ -1.96
SPB4YFL002C RPL30P14120 105 aaKnown RBP2.79□□□□□ -1.96
SPB4YFL002C YET1P35723 206 aa2.79□□□□□ -1.96
SPB4YFL002C SFK1P35735 353 aa2.79□□□□□ -1.96
SPB4YFL002C YJR146WP47174 117 aa2.79□□□□□ -1.96
SPB4YFL002C TIM13P53299 105 aa2.79□□□□□ -1.96
SPB4YFL002C YOR214CQ12282 236 aa2.79□□□□□ -1.96
SPB4YFL002C MIG1P27705 504 aa2.78□□□□□ -1.96
SPB4YFL002C CPR5P35176 225 aa2.78□□□□□ -1.96
SPB4YFL002C ERJ5P43613 295 aaPredicted RBP2.78□□□□□ -1.96
SPB4YFL002C YNR062CP53748 327 aa2.78□□□□□ -1.96
SPB4YFL002C MRPS8Q03799 155 aa2.78□□□□□ -1.96
SPB4YFL002C TIR1P10863 254 aa2.77□□□□□ -1.97
SPB4YFL002C SHE2P36068 246 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
SPB4YFL002C RPL33BP41056 107 aaKnown RBP2.77□□□□□ -1.97
SPB4YFL002C YJR015WP47090 510 aa2.77□□□□□ -1.97
SPB4YFL002C MPC3P53311 146 aa2.77□□□□□ -1.97
SPB4YFL002C GIS2P53849 153 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
SPB4YFL002C SLM2P53955 656 aa2.77□□□□□ -1.97
SPB4YFL002C FYV12Q08559 129 aa2.77□□□□□ -1.97
SPB4YFL002C NSP1P14907 823 aaKnown RBP2.77□□□□□ -1.97
SPB4YFL002C FYV4P38783 130 aaPredicted RBP2.77□□□□□ -1.97
SPB4YFL002C NSA2P40078 261 aaKnown RBP2.77□□□□□ -1.97
SPB4YFL002C YMR295CQ03559 197 aa2.77□□□□□ -1.97
SPB4YFL002C CSN9Q03981 162 aa2.77□□□□□ -1.97
SPB4YFL002C SHH3Q04487 196 aa2.77□□□□□ -1.97
SPB4YFL002C YMR320WQ04897 101 aa2.77□□□□□ -1.97
SPB4YFL002C RDS3Q06835 107 aaPredicted RBP2.77□□□□□ -1.97
SPB4YFL002C SPC25P40014 221 aa2.76□□□□□ -1.97
SPB4YFL002C TIR3P40552 269 aa2.76□□□□□ -1.97
SPB4YFL002C GLR1P41921 483 aaKnown RBP2.76□□□□□ -1.97
SPB4YFL002C CIS3P47001 227 aa2.76□□□□□ -1.97
SPB4YFL002C GAL83Q04739 417 aa2.76□□□□□ -1.97
SPB4YFL002C TAF2P23255 1407 aa2.76□□□□□ -1.97
SPB4YFL002C ATP5P09457 212 aa2.75□□□□□ -1.97
SPB4YFL002C SDH4P37298 181 aa2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms