RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W ERJ5P43613 295 aaPredicted RBP1.05□□□□□ -2.24
MSN5YDR335W YJL028WP47062 111 aa1.05□□□□□ -2.24
MSN5YDR335W PRM8P53174 237 aa1.05□□□□□ -2.24
MSN5YDR335W YMR181CQ03231 154 aa1.05□□□□□ -2.24
MSN5YDR335W YPL257WQ08974 193 aa1.05□□□□□ -2.24
MSN5YDR335W YOR342CQ12182 319 aa1.05□□□□□ -2.24
MSN5YDR335W RPS8AP0CX39 200 aaKnown RBP1.04□□□□□ -2.24
MSN5YDR335W RPS8BP0CX40 200 aaKnown RBP1.04□□□□□ -2.24
MSN5YDR335W TIR1P10863 254 aa1.04□□□□□ -2.24
MSN5YDR335W AHC2P25649 128 aa1.04□□□□□ -2.24
MSN5YDR335W ZRT3P34240 503 aa1.04□□□□□ -2.24
MSN5YDR335W YOR062CP36025 268 aa1.04□□□□□ -2.24
MSN5YDR335W TVP23P38962 199 aa1.04□□□□□ -2.24
MSN5YDR335W RSM25P40496 264 aa1.04□□□□□ -2.24
MSN5YDR335W EAF6P47128 113 aa1.04□□□□□ -2.24
MSN5YDR335W LSM7P53905 115 aaKnown RBP1.04□□□□□ -2.24
MSN5YDR335W YPL039WQ03080 316 aa1.04□□□□□ -2.24
MSN5YDR335W YMR099CQ03161 297 aaKnown RBP1.04□□□□□ -2.24
MSN5YDR335W YMR254CQ04838 102 aa1.04□□□□□ -2.24
MSN5YDR335W YOR186WQ08560 144 aa1.04□□□□□ -2.24
MSN5YDR335W YDL085C-AQ3E7B7 68 aaKnown RBP1.04□□□□□ -2.24
MSN5YDR335W REP2P03872 296 aa1.04□□□□□ -2.24
MSN5YDR335W RPL30P14120 105 aaKnown RBP1.04□□□□□ -2.24
MSN5YDR335W ERG2P32352 222 aa1.04□□□□□ -2.24
MSN5YDR335W RNP1P32385 249 aa1.04□□□□□ -2.24
MSN5YDR335W RPR2P40571 144 aa1.04□□□□□ -2.24
MSN5YDR335W MNN5P46982 586 aa1.04□□□□□ -2.24
MSN5YDR335W GPI14P47088 403 aaKnown RBP1.04□□□□□ -2.24
MSN5YDR335W SDT1P53078 280 aa1.04□□□□□ -2.24
MSN5YDR335W JAC1P53193 184 aa1.04□□□□□ -2.24
MSN5YDR335W ERP1Q05359 219 aaKnown RBP1.04□□□□□ -2.24
MSN5YDR335W ATG39Q06159 398 aa1.04□□□□□ -2.24
MSN5YDR335W YPD1Q07688 167 aa1.04□□□□□ -2.24
MSN5YDR335W TRM10Q12400 293 aa1.04□□□□□ -2.24
MSN5YDR335W YHR139C-AO13536 103 aa1.04□□□□□ -2.24
MSN5YDR335W TPI1P00942 248 aaKnown RBP1.04□□□□□ -2.24
MSN5YDR335W KIN28P06242 306 aa1.04□□□□□ -2.24
MSN5YDR335W RSA4P25382 515 aaKnown RBP1.04□□□□□ -2.24
MSN5YDR335W SRP21P32342 167 aa1.04□□□□□ -2.24
MSN5YDR335W MBA1P38300 278 aa1.04□□□□□ -2.24
MSN5YDR335W YEA4P40004 342 aa1.04□□□□□ -2.24
MSN5YDR335W AVT6P40074 448 aa1.04□□□□□ -2.24
MSN5YDR335W SYF2P53277 215 aaPredicted RBP1.04□□□□□ -2.24
MSN5YDR335W YNL046WP53956 172 aa1.04□□□□□ -2.24
MSN5YDR335W LSM3P57743 89 aaKnown RBP1.04□□□□□ -2.24
MSN5YDR335W DID2P69771 204 aa1.04□□□□□ -2.24
MSN5YDR335W HSK3P69852 69 aa1.04□□□□□ -2.24
MSN5YDR335W RMI1Q02685 241 aa1.04□□□□□ -2.24
MSN5YDR335W MRX8Q05473 314 aa1.04□□□□□ -2.24
MSN5YDR335W PSF1Q12488 208 aa1.04□□□□□ -2.24
MSN5YDR335W TSC3Q3E790 80 aa1.04□□□□□ -2.24
MSN5YDR335W YCR101CP25607 182 aa1.03□□□□□ -2.24
MSN5YDR335W YHI9P38765 294 aa1.03□□□□□ -2.24
MSN5YDR335W GLC8P41818 229 aa1.03□□□□□ -2.24
MSN5YDR335W MEP2P41948 499 aa1.03□□□□□ -2.24
MSN5YDR335W DIG2Q03373 323 aaKnown RBP1.03□□□□□ -2.24
MSN5YDR335W NEJ1Q06148 342 aa1.03□□□□□ -2.24
MSN5YDR335W FRQ1Q06389 190 aa1.03□□□□□ -2.24
MSN5YDR335W YDL211CQ12121 372 aa1.03□□□□□ -2.24
MSN5YDR335W SPC3Q12133 184 aa1.03□□□□□ -2.24
MSN5YDR335W ATG5Q12380 294 aa1.03□□□□□ -2.24
MSN5YDR335W FUN26P31381 517 aa1.03□□□□□ -2.24
MSN5YDR335W RCN1P36054 211 aa1.03□□□□□ -2.24
MSN5YDR335W CSH1P38287 376 aa1.03□□□□□ -2.24
MSN5YDR335W FIS1P40515 155 aa1.03□□□□□ -2.24
MSN5YDR335W TTI2P47168 421 aa1.03□□□□□ -2.24
MSN5YDR335W AAH1P53909 347 aa1.03□□□□□ -2.24
MSN5YDR335W RCE1Q03530 315 aa1.03□□□□□ -2.24
MSN5YDR335W LPP1Q04396 274 aa1.03□□□□□ -2.24
MSN5YDR335W API2Q04413 109 aa1.03□□□□□ -2.24
MSN5YDR335W SYC1Q08553 188 aaPredicted RBP1.03□□□□□ -2.24
MSN5YDR335W Q0255P03881 472 aa1.03□□□□□ -2.25
MSN5YDR335W PRE7P23724 241 aaKnown RBP1.03□□□□□ -2.25
MSN5YDR335W RNA14P25298 677 aaKnown RBP1.03□□□□□ -2.25
MSN5YDR335W SNC2P33328 115 aa1.03□□□□□ -2.25
MSN5YDR335W YER137CP40083 148 aaKnown RBP1.03□□□□□ -2.25
MSN5YDR335W DIM1P41819 318 aaKnown RBP1.03□□□□□ -2.25
MSN5YDR335W ALB1P47019 175 aaPredicted RBP1.03□□□□□ -2.25
MSN5YDR335W YGR164WP53291 111 aa1.03□□□□□ -2.25
MSN5YDR335W ACT1P60010 375 aaKnown RBP1.03□□□□□ -2.25
MSN5YDR335W ARL3Q02804 198 aa1.03□□□□□ -2.25
MSN5YDR335W GPI17Q04080 534 aa1.03□□□□□ -2.25
MSN5YDR335W THI74Q04083 370 aa1.03□□□□□ -2.25
MSN5YDR335W PBA1Q05778 276 aa1.03□□□□□ -2.25
MSN5YDR335W FYV12Q08559 129 aa1.03□□□□□ -2.25
MSN5YDR335W ATX2Q12067 313 aa1.03□□□□□ -2.25
MSN5YDR335W PRR2Q12310 699 aa1.03□□□□□ -2.25
MSN5YDR335W YNL277W-AQ3E7Z0 62 aa1.03□□□□□ -2.25
MSN5YDR335W ADH3P07246 375 aaKnown RBP1.02□□□□□ -2.25
MSN5YDR335W PHO13P19881 312 aa1.02□□□□□ -2.25
MSN5YDR335W TVP38P36164 337 aa1.02□□□□□ -2.25
MSN5YDR335W MIX23P38162 196 aa1.02□□□□□ -2.25
MSN5YDR335W FMP23P38231 175 aa1.02□□□□□ -2.25
MSN5YDR335W MIG3P39943 394 aa1.02□□□□□ -2.25
MSN5YDR335W GAT4P40569 121 aa1.02□□□□□ -2.25
MSN5YDR335W GPI2P46961 280 aa1.02□□□□□ -2.25
MSN5YDR335W TDA4P47153 279 aa1.02□□□□□ -2.25
MSN5YDR335W YDR391CQ04170 232 aa1.02□□□□□ -2.25
MSN5YDR335W RIM9Q04734 239 aa1.02□□□□□ -2.25
MSN5YDR335W CUP1-1P0CX80 61 aa1.02□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms