RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 COL4A6Q14031 1691 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 A0A0U1RQF3 1178 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 UPK3BL1B0FP48 263 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 UPK3BL2E5RIL1 263 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 PI15O43692 258 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 GNA11P29992 359 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 AFF1P51825 1210 aaKnown RBP5.31□□□□□ -1.56
LINC00550-201ENST00000629293 NDUFA8P51970 172 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 ITIH3Q06033 890 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 CCDC12Q8WUD4 166 aaPredicted RBP5.31□□□□□ -1.56
LINC00550-201ENST00000629293 NECTIN4Q96NY8 510 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 GJB4Q9NTQ9 266 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 TBC1D13Q9NVG8 400 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 ANO10Q9NW15 660 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 CA14Q9ULX7 337 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 R4GN57 208 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 CHD6Q8TD26 2715 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 IGF2RP11717 2491 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 IGKV6D-21A0A0A0MT36 114 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 CCDC196A0A1B0GTZ2 297 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 SPTLC2O15270 562 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 MSH4O15457 936 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 RFPL2O75678 378 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 CDKL5O76039 1030 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 SFPQP23246 707 aaKnown RBP eCLIP5.31□□□□□ -1.56
LINC00550-201ENST00000629293 OR1G1P47890 313 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 NPEPPSP55786 919 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 SETQ01105 290 aaPredicted RBP5.31□□□□□ -1.56
LINC00550-201ENST00000629293 HSP90AA2PQ14568 343 aaPredicted RBP5.31□□□□□ -1.56
LINC00550-201ENST00000629293 PTPAQ15257 358 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 PFKFB3Q16875 520 aaPredicted RBP5.31□□□□□ -1.56
LINC00550-201ENST00000629293 NOMO2Q5JPE7 1267 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 CCDC186Q7Z3E2 898 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 PRICKLE2Q7Z3G6 844 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 PALB2Q86YC2 1186 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 ZNF280BQ86YH2 543 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 SMAP1Q8IYB5 467 aaPredicted RBP5.31□□□□□ -1.56
LINC00550-201ENST00000629293 UBALD2Q8IYN6 164 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 TTC16Q8NEE8 873 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 BCL7CQ8WUZ0 217 aaPredicted RBP5.31□□□□□ -1.56
LINC00550-201ENST00000629293 B3GALT6Q96L58 329 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 MTA3Q9BTC8 594 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 TEKT3Q9BXF9 490 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 MRPL9Q9BYD2 267 aaKnown RBP5.31□□□□□ -1.56
LINC00550-201ENST00000629293 GLT8D2Q9H1C3 349 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 ADAMTS10Q9H324 1103 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 UNC45AQ9H3U1 944 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 CYP26B1Q9NR63 512 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 NDFIP2Q9NV92 336 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 CACNA2D2Q9NY47 1150 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 SUCLA2Q9P2R7 463 aaPredicted RBP5.31□□□□□ -1.56
LINC00550-201ENST00000629293 LZTS1Q9Y250 596 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 PLXNA4Q9HCM2 1894 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 COL1A2P08123 1366 aa5.31□□□□□ -1.56
LINC00550-201ENST00000629293 CPLX1O14810 134 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 FSCN2O14926 492 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 NARSO43776 548 aaKnown RBP5.3□□□□□ -1.56
LINC00550-201ENST00000629293 CILPO75339 1184 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 TDP2O95551 362 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 CMA1P23946 247 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 U2AF2P26368 475 aaKnown RBP eCLIP5.3□□□□□ -1.56
LINC00550-201ENST00000629293 ID4P47928 161 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 SLC11A1P49279 550 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 GYS2P54840 703 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 FAM189BP81408 668 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 SFSWAPQ12872 951 aaKnown RBP5.3□□□□□ -1.56
LINC00550-201ENST00000629293 SLC39A14Q15043 492 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 STK38Q15208 465 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 SPRED3Q2MJR0 410 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 MCTP2Q6DN12 878 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 KIAA2013Q8IYS2 634 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 TBCKQ8TEA7 893 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 GAL3ST3Q96A11 431 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 TMEM143Q96AN5 459 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 ANAPC16Q96DE5 110 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 IGSF21Q96ID5 467 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 AIFM3Q96NN9 605 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 TRIM5Q9C035 493 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 ELAC1Q9H777 363 aaKnown RBP5.3□□□□□ -1.56
LINC00550-201ENST00000629293 NRDE2Q9H7Z3 1164 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 HPSEQ9Y251 543 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 PRKAB1Q9Y478 270 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 HES2Q9Y543 173 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 ATG2AQ2TAZ0 1938 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 RALGAPA2Q2PPJ7 1873 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 CFAP47Q6ZTR5 3102 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 A0A1B0GVL5 298 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 PRR23AA6NEV1 266 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 DNAJC6O75061 913 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 PPP6R2O75170 966 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 DCNP07585 359 aaKnown RBP5.3□□□□□ -1.56
LINC00550-201ENST00000629293 GALTP07902 379 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 SOX18P35713 384 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 MASP1P48740 699 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 RCAN1P53805 252 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 LRMPQ12912 555 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 MRM1Q6IN84 353 aaKnown RBP5.3□□□□□ -1.56
LINC00550-201ENST00000629293 OTOP3Q7RTS5 596 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 CDR2LQ86X02 465 aaPredicted RBP5.3□□□□□ -1.56
LINC00550-201ENST00000629293 LSRQ86X29 649 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms