RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C HRD1Q08109 551 aa6.51□□□□□ -1.37
LSP1YPL004C BOL1Q3E793 110 aa6.51□□□□□ -1.37
LSP1YPL004C YOS1Q3E834 85 aa6.51□□□□□ -1.37
LSP1YPL004C PHO85P17157 305 aa6.5□□□□□ -1.37
LSP1YPL004C SRY1P36007 326 aa6.5□□□□□ -1.37
LSP1YPL004C NOP16P40007 231 aaKnown RBP6.5□□□□□ -1.37
LSP1YPL004C NIF3P53081 288 aa6.5□□□□□ -1.37
LSP1YPL004C YNL234WP53857 426 aa6.5□□□□□ -1.37
LSP1YPL004C CAB5Q03941 241 aa6.5□□□□□ -1.37
LSP1YPL004C LPP1Q04396 274 aa6.5□□□□□ -1.37
LSP1YPL004C DAL4Q04895 635 aa6.5□□□□□ -1.37
LSP1YPL004C YOL029CQ08187 201 aa6.5□□□□□ -1.37
LSP1YPL004C TRM13Q12383 476 aa6.5□□□□□ -1.37
LSP1YPL004C QCR2P07257 368 aa6.49□□□□□ -1.37
LSP1YPL004C PUT1P09368 476 aa6.49□□□□□ -1.37
LSP1YPL004C TOM40P23644 387 aaKnown RBP6.49□□□□□ -1.37
LSP1YPL004C HOF1Q05080 669 aa6.49□□□□□ -1.37
LSP1YPL004C YFH1Q07540 174 aa6.49□□□□□ -1.37
LSP1YPL004C FCY1Q12178 158 aa6.49□□□□□ -1.37
LSP1YPL004C RAX2Q12465 1220 aa6.49□□□□□ -1.37
LSP1YPL004C RPL9AP05738 191 aaKnown RBP6.48□□□□□ -1.37
LSP1YPL004C RAD52P06778 471 aaKnown RBP6.48□□□□□ -1.37
LSP1YPL004C YCR061WP25639 631 aa6.48□□□□□ -1.37
LSP1YPL004C MRP17P28778 131 aa6.48□□□□□ -1.37
LSP1YPL004C COS8P38723 381 aa6.48□□□□□ -1.37
LSP1YPL004C YHR138CP38841 114 aaPredicted RBP6.48□□□□□ -1.37
LSP1YPL004C IRC24P40580 263 aa6.48□□□□□ -1.37
LSP1YPL004C YFL054CP43549 646 aa6.48□□□□□ -1.37
LSP1YPL004C YIP1P53039 248 aa6.48□□□□□ -1.37
LSP1YPL004C NGL2Q03264 515 aaKnown RBP6.48□□□□□ -1.37
LSP1YPL004C VPS63O13549 108 aa6.47□□□□□ -1.37
LSP1YPL004C ARG80P07249 177 aa6.47□□□□□ -1.37
LSP1YPL004C OLE1P21147 510 aaKnown RBP6.47□□□□□ -1.37
LSP1YPL004C NPL6P32832 435 aa6.47□□□□□ -1.37
LSP1YPL004C YKL102CP34249 101 aa6.47□□□□□ -1.37
LSP1YPL004C YPC1P38298 316 aa6.47□□□□□ -1.37
LSP1YPL004C PUS4P48567 403 aaKnown RBP6.47□□□□□ -1.37
LSP1YPL004C RPL9BP51401 191 aaKnown RBP6.47□□□□□ -1.37
LSP1YPL004C YGR151CP53287 111 aa6.47□□□□□ -1.37
LSP1YPL004C BFR1P38934 470 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38 RIP-Chip
LSP1YPL004C UBP8P50102 471 aa6.46□□□□□ -1.38
LSP1YPL004C PAM18Q07914 168 aa6.46□□□□□ -1.38
LSP1YPL004C YCT1Q12235 531 aa6.46□□□□□ -1.38
LSP1YPL004C SUA5P32579 426 aa6.45□□□□□ -1.38
LSP1YPL004C RPA14P50106 137 aa6.45□□□□□ -1.38
LSP1YPL004C MRPL13Q02204 264 aa6.45□□□□□ -1.38
LSP1YPL004C HBN1Q96VH4 193 aa6.45□□□□□ -1.38
LSP1YPL004C FEN2P25621 512 aaKnown RBP6.44□□□□□ -1.38
LSP1YPL004C RAD23P32628 398 aaKnown RBP6.44□□□□□ -1.38
LSP1YPL004C PRY2P36110 329 aa6.44□□□□□ -1.38
LSP1YPL004C YKR045CP36138 183 aa6.44□□□□□ -1.38
LSP1YPL004C PSD1P39006 500 aa6.44□□□□□ -1.38
LSP1YPL004C TAX4P47030 604 aa6.44□□□□□ -1.38
LSP1YPL004C HED1Q03937 162 aa6.44□□□□□ -1.38
LSP1YPL004C FEX2Q08991 375 aa6.44□□□□□ -1.38
LSP1YPL004C JID1Q12350 301 aa6.44□□□□□ -1.38
LSP1YPL004C PRM4Q12498 284 aa6.44□□□□□ -1.38
LSP1YPL004C YBR255C-AQ3E776 120 aa6.44□□□□□ -1.38
LSP1YPL004C TPI1P00942 248 aaKnown RBP6.43□□□□□ -1.38
LSP1YPL004C YNK1P36010 153 aaKnown RBP6.43□□□□□ -1.38
LSP1YPL004C YCR041WP37265 110 aa6.43□□□□□ -1.38
LSP1YPL004C ERV15P38312 142 aa6.43□□□□□ -1.38
LSP1YPL004C YJR012CP47087 207 aa6.43□□□□□ -1.38
LSP1YPL004C YNG1Q08465 219 aa6.43□□□□□ -1.38
LSP1YPL004C AEP3Q12089 606 aa6.43□□□□□ -1.38
LSP1YPL004C SCM3Q12334 223 aa6.43□□□□□ -1.38
LSP1YPL004C TFB5Q3E7C1 72 aaPredicted RBP6.43□□□□□ -1.38
LSP1YPL004C YER190C-BP0CX94 160 aa6.42□□□□□ -1.38
LSP1YPL004C YEL077W-AP0CX95 160 aa6.42□□□□□ -1.38
LSP1YPL004C YGR296C-BP0CX96 160 aa6.42□□□□□ -1.38
LSP1YPL004C YPL283W-BP0CX97 160 aa6.42□□□□□ -1.38
LSP1YPL004C YPR204C-AP0CX98 160 aa6.42□□□□□ -1.38
LSP1YPL004C YFL068WP0CX99 160 aa6.42□□□□□ -1.38
LSP1YPL004C YLL066W-AP0CY00 160 aa6.42□□□□□ -1.38
LSP1YPL004C YLL067W-AP0CY01 160 aa6.42□□□□□ -1.38
LSP1YPL004C RPL13BP40212 199 aaKnown RBP6.42□□□□□ -1.38
LSP1YPL004C ARP3P47117 449 aaKnown RBP6.42□□□□□ -1.38
LSP1YPL004C VPS28Q02767 242 aa6.42□□□□□ -1.38
LSP1YPL004C SPG4Q04438 115 aa6.42□□□□□ -1.38
LSP1YPL004C MCH1Q07376 486 aa6.42□□□□□ -1.38
LSP1YPL004C RPL13AQ12690 199 aaPredicted RBP6.42□□□□□ -1.38
LSP1YPL004C HTB1P02293 131 aaKnown RBP6.41□□□□□ -1.38
LSP1YPL004C INO2P26798 304 aa6.41□□□□□ -1.38
LSP1YPL004C PPQ1P32945 549 aa6.41□□□□□ -1.38
LSP1YPL004C PRS4P38063 326 aaPredicted RBP6.41□□□□□ -1.38
LSP1YPL004C RRF1P38771 230 aa6.41□□□□□ -1.38
LSP1YPL004C LSM12P38828 187 aaKnown RBP6.41□□□□□ -1.38
LSP1YPL004C YJL213WP40896 331 aa6.41□□□□□ -1.38
LSP1YPL004C YGR210CP42942 411 aa6.41□□□□□ -1.38
LSP1YPL004C YJL163CP46996 555 aa6.41□□□□□ -1.38
LSP1YPL004C FSH2Q05015 223 aa6.41□□□□□ -1.38
LSP1YPL004C FEX1Q08913 375 aa6.41□□□□□ -1.38
LSP1YPL004C ATG5Q12380 294 aa6.41□□□□□ -1.38
LSP1YPL004C ATG31Q12421 196 aa6.41□□□□□ -1.38
LSP1YPL004C NOP1P15646 327 aaKnown RBP6.4□□□□□ -1.38
LSP1YPL004C ATP3P38077 311 aaKnown RBP6.4□□□□□ -1.38
LSP1YPL004C GEP4P38812 185 aa6.4□□□□□ -1.38
LSP1YPL004C GPP2P40106 250 aaKnown RBP6.4□□□□□ -1.38
LSP1YPL004C YGL258W-AQ3E740 77 aa6.4□□□□□ -1.38
LSP1YPL004C YIR035CP40579 254 aa6.39□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms