RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeastyeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC39YLR440C YLR415CO13578 112 aa4.42□□□□□ -1.7
SEC39YLR440C MDM31P38880 579 aa4.42□□□□□ -1.7
SEC39YLR440C TVP23P38962 199 aa4.42□□□□□ -1.7
SEC39YLR440C PEX22P39718 180 aa4.42□□□□□ -1.7
SEC39YLR440C MIT1P40002 666 aa4.42□□□□□ -1.7
SEC39YLR440C SWM2P40342 146 aa4.42□□□□□ -1.7
SEC39YLR440C XBP1P40489 647 aa4.42□□□□□ -1.7
SEC39YLR440C YIR007WP40566 764 aa4.42□□□□□ -1.7
SEC39YLR440C ERG25P53045 309 aa4.42□□□□□ -1.7
SEC39YLR440C YGR039WP53225 103 aa4.42□□□□□ -1.7
SEC39YLR440C DOT1Q04089 582 aaKnown RBP4.42□□□□□ -1.7
SEC39YLR440C HPF1Q05164 967 aa4.42□□□□□ -1.7
SEC39YLR440C YLR224WQ05947 369 aa4.42□□□□□ -1.7
SEC39YLR440C SNT309Q06091 175 aaPredicted RBP4.42□□□□□ -1.7
SEC39YLR440C NAT3Q06504 195 aa4.42□□□□□ -1.7
SEC39YLR440C BSP1Q06604 576 aa4.42□□□□□ -1.7
SEC39YLR440C FCY1Q12178 158 aa4.42□□□□□ -1.7
SEC39YLR440C MCT1Q12283 360 aa4.42□□□□□ -1.7
SEC39YLR440C YIL134C-AQ45U18 67 aa4.42□□□□□ -1.7
SEC39YLR440C MSW1P04803 379 aa4.42□□□□□ -1.7
SEC39YLR440C ADH3P07246 375 aaKnown RBP4.42□□□□□ -1.7
SEC39YLR440C YOL163WP0CF20 169 aa4.42□□□□□ -1.7
SEC39YLR440C ATG15P25641 520 aa4.42□□□□□ -1.7
SEC39YLR440C POP5P28005 173 aa4.42□□□□□ -1.7
SEC39YLR440C MRPL6P32904 214 aa4.42□□□□□ -1.7
SEC39YLR440C TRR2P38816 342 aa4.42□□□□□ -1.7
SEC39YLR440C DLS1P40366 167 aa4.42□□□□□ -1.7
SEC39YLR440C YIL059CP40520 121 aa4.42□□□□□ -1.7
SEC39YLR440C BUD13P46947 266 aaPredicted RBP4.42□□□□□ -1.7
SEC39YLR440C CPR8P53728 308 aa4.42□□□□□ -1.7
SEC39YLR440C PDR17P53844 350 aa4.42□□□□□ -1.7
SEC39YLR440C SCW10Q04951 389 aa4.42□□□□□ -1.7
SEC39YLR440C MMT2Q08970 484 aa4.42□□□□□ -1.7
SEC39YLR440C YBR182C-AQ8TGU6 64 aa4.42□□□□□ -1.7
SEC39YLR440C YOR338WQ99326 363 aa4.42□□□□□ -1.7
SEC39YLR440C FMP49A0A023PZB3 126 aa4.41□□□□□ -1.7
SEC39YLR440C SAM35P14693 329 aa4.41□□□□□ -1.7
SEC39YLR440C YKL187CP34231 750 aa4.41□□□□□ -1.7
SEC39YLR440C DCW1P36091 449 aa4.41□□□□□ -1.7
SEC39YLR440C POP1P41812 875 aa4.41□□□□□ -1.7
SEC39YLR440C MOB2P43563 287 aa4.41□□□□□ -1.7
SEC39YLR440C GCV1P48015 400 aa4.41□□□□□ -1.7
SEC39YLR440C PRM8P53174 237 aa4.41□□□□□ -1.7
SEC39YLR440C CLD1P53264 445 aa4.41□□□□□ -1.7
SEC39YLR440C MSS11Q03825 758 aa4.41□□□□□ -1.7
SEC39YLR440C UPS1Q05776 175 aa4.41□□□□□ -1.7
SEC39YLR440C YOR376WQ08900 122 aa4.41□□□□□ -1.7
SEC39YLR440C DIF1O13577 133 aa4.4□□□□□ -1.7
SEC39YLR440C SEC4P07560 215 aaKnown RBP4.4□□□□□ -1.7
SEC39YLR440C INO4P13902 151 aa4.4□□□□□ -1.7
SEC39YLR440C TIP1P27654 210 aaPredicted RBP4.4□□□□□ -1.7
SEC39YLR440C PDX3P38075 228 aaKnown RBP4.4□□□□□ -1.7
SEC39YLR440C ATG8P38182 117 aaRIP-Chip data4.4□□□□□ -1.7not detected
SEC39YLR440C VFA1P40080 203 aa4.4□□□□□ -1.7
SEC39YLR440C APQ12P40532 138 aa4.4□□□□□ -1.7
SEC39YLR440C SAS2P40963 338 aa4.4□□□□□ -1.7
SEC39YLR440C SYS1P41544 203 aa4.4□□□□□ -1.7
SEC39YLR440C THG1P53215 237 aaKnown RBP4.4□□□□□ -1.7
SEC39YLR440C YNL095CP53932 642 aa4.4□□□□□ -1.7
SEC39YLR440C RSM10Q03201 203 aa4.4□□□□□ -1.7
SEC39YLR440C VBA1Q04301 562 aa4.4□□□□□ -1.7
SEC39YLR440C YLR042CQ07990 161 aa4.4□□□□□ -1.7
SEC39YLR440C CSI2Q08054 341 aa4.4□□□□□ -1.7
SEC39YLR440C Q0142Q9ZZW4 58 aa4.4□□□□□ -1.7
SEC39YLR440C RPL2AP0CX45 254 aaKnown RBP4.4□□□□□ -1.71
SEC39YLR440C RPL2BP0CX46 254 aaKnown RBP4.4□□□□□ -1.71
SEC39YLR440C YER079WP40052 210 aaKnown RBP4.4□□□□□ -1.71
SEC39YLR440C EGT2P42835 1041 aa4.4□□□□□ -1.71
SEC39YLR440C IRC15Q02733 499 aa4.4□□□□□ -1.71
SEC39YLR440C INP1Q03694 420 aa4.4□□□□□ -1.71
SEC39YLR440C YOL131WQ08270 108 aa4.4□□□□□ -1.71
SEC39YLR440C UTP23Q12339 254 aaKnown RBP4.4□□□□□ -1.71
SEC39YLR440C YLR412C-AQ3E742 68 aa4.4□□□□□ -1.71
SEC39YLR440C BOL1Q3E793 110 aa4.4□□□□□ -1.71
SEC39YLR440C YNL277W-AQ3E7Z0 62 aa4.4□□□□□ -1.71
SEC39YLR440C YNR034W-AQ3E841 98 aa4.4□□□□□ -1.71
SEC39YLR440C IGO2Q9P305 131 aa4.4□□□□□ -1.71
SEC39YLR440C MRS1P07266 363 aa4.39□□□□□ -1.71
SEC39YLR440C RPL20AP0CX23 172 aaKnown RBP4.39□□□□□ -1.71
SEC39YLR440C RPL20BP0CX24 172 aaPredicted RBP4.39□□□□□ -1.71
SEC39YLR440C MRPS5P33759 307 aa4.39□□□□□ -1.71
SEC39YLR440C SWD2P36104 329 aaPredicted RBP4.39□□□□□ -1.71
SEC39YLR440C POP8P38208 133 aa4.39□□□□□ -1.71
SEC39YLR440C HMF1P40037 129 aaKnown RBP4.39□□□□□ -1.71
SEC39YLR440C YMR087WQ04299 284 aa4.39□□□□□ -1.71
SEC39YLR440C THI20Q08224 551 aa4.39□□□□□ -1.71
SEC39YLR440C ERV2Q12284 196 aa4.39□□□□□ -1.71
SEC39YLR440C HUT1Q12520 339 aa4.39□□□□□ -1.71
SEC39YLR440C YLR149CQ99296 730 aa4.39□□□□□ -1.71
SEC39YLR440C UBR2Q07963 1872 aa4.39□□□□□ -1.71
SEC39YLR440C UBR1P19812 1950 aa4.39□□□□□ -1.71
SEC39YLR440C RPB3P16370 318 aaKnown RBP4.39□□□□□ -1.71
SEC39YLR440C ERS1P17261 260 aa4.39□□□□□ -1.71
SEC39YLR440C CLB6P32943 380 aa4.39□□□□□ -1.71
SEC39YLR440C MRPL11P36521 249 aaPredicted RBP4.39□□□□□ -1.71
SEC39YLR440C GET2P40056 285 aa4.39□□□□□ -1.71
SEC39YLR440C HMS2P47175 358 aa4.39□□□□□ -1.71
SEC39YLR440C SDT1P53078 280 aa4.39□□□□□ -1.71
SEC39YLR440C TAM41P53230 385 aa4.39□□□□□ -1.71
SEC39YLR440C YGR219WP53307 113 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms