RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C YTH1Q06102 208 aaPredicted RBP2.53□□□□□ -2
NMD2YHR077C DXO1Q06349 442 aa2.53□□□□□ -2
NMD2YHR077C YPD1Q07688 167 aa2.53□□□□□ -2
NMD2YHR077C YOR029WQ12243 111 aa2.53□□□□□ -2
NMD2YHR077C Q0144Q9ZZW2 109 aa2.53□□□□□ -2
NMD2YHR077C RPB3P16370 318 aaKnown RBP2.53□□□□□ -2
NMD2YHR077C ELO2P25358 347 aa2.53□□□□□ -2
NMD2YHR077C LDB16P25587 256 aa2.53□□□□□ -2
NMD2YHR077C MCH2P36032 473 aa2.53□□□□□ -2
NMD2YHR077C MRPL39P36533 70 aa2.53□□□□□ -2
NMD2YHR077C COX15P40086 486 aa2.53□□□□□ -2
NMD2YHR077C FLX1P40464 311 aa2.53□□□□□ -2
NMD2YHR077C IRC24P40580 263 aa2.53□□□□□ -2
NMD2YHR077C TIM21P53220 239 aa2.53□□□□□ -2
NMD2YHR077C SLX9P53251 210 aaPredicted RBP2.53□□□□□ -2
NMD2YHR077C HOL1P53389 586 aa2.53□□□□□ -2
NMD2YHR077C FIT3Q08907 204 aa2.53□□□□□ -2
NMD2YHR077C YDL180WQ12301 547 aa2.53□□□□□ -2
NMD2YHR077C CKA1P15790 372 aa2.53□□□□□ -2
NMD2YHR077C VMA8P32610 256 aaKnown RBP2.53□□□□□ -2
NMD2YHR077C ERV15P38312 142 aa2.53□□□□□ -2
NMD2YHR077C YHL037CP38733 133 aa2.53□□□□□ -2
NMD2YHR077C PSD1P39006 500 aa2.53□□□□□ -2
NMD2YHR077C YGR050CP53231 118 aa2.53□□□□□ -2
NMD2YHR077C STP4Q07351 490 aa2.53□□□□□ -2
NMD2YHR077C RRS1Q08746 203 aaKnown RBP2.53□□□□□ -2
NMD2YHR077C RAD28Q12021 506 aa2.53□□□□□ -2
NMD2YHR077C USB1Q12208 290 aaKnown RBP2.53□□□□□ -2
NMD2YHR077C FOL3Q12676 427 aaPredicted RBP2.53□□□□□ -2
NMD2YHR077C SSA3P09435 649 aaKnown RBP2.52□□□□□ -2.01
NMD2YHR077C ERV1P27882 189 aa2.52□□□□□ -2.01
NMD2YHR077C REC104P33323 182 aa2.52□□□□□ -2.01
NMD2YHR077C YUH1P35127 236 aa2.52□□□□□ -2.01
NMD2YHR077C SHM2P37291 469 aaKnown RBP2.52□□□□□ -2.01
NMD2YHR077C CUE1P38428 203 aa2.52□□□□□ -2.01
NMD2YHR077C VMA21P41806 77 aa2.52□□□□□ -2.01
NMD2YHR077C GNA1P43577 159 aaPredicted RBP2.52□□□□□ -2.01
NMD2YHR077C GON7P46984 123 aa2.52□□□□□ -2.01
NMD2YHR077C RCE1Q03530 315 aa2.52□□□□□ -2.01
NMD2YHR077C NUP53Q03790 475 aa2.52□□□□□ -2.01
NMD2YHR077C TSA2Q04120 196 aa2.52□□□□□ -2.01
NMD2YHR077C GMC1Q04399 608 aa2.52□□□□□ -2.01
NMD2YHR077C AVO2Q04749 426 aa2.52□□□□□ -2.01
NMD2YHR077C YOR015WQ12169 119 aa2.52□□□□□ -2.01
NMD2YHR077C RPI1P23250 407 aaKnown RBP2.52□□□□□ -2.01
NMD2YHR077C POF1P25576 258 aa2.52□□□□□ -2.01
NMD2YHR077C YKL107WP34251 309 aa2.52□□□□□ -2.01
NMD2YHR077C PAU15P40585 124 aa2.52□□□□□ -2.01
NMD2YHR077C PHB1P40961 287 aa2.52□□□□□ -2.01
NMD2YHR077C ARP3P47117 449 aaKnown RBP2.52□□□□□ -2.01
NMD2YHR077C CRH1P53301 507 aa2.52□□□□□ -2.01
NMD2YHR077C FIT1Q04433 528 aa2.52□□□□□ -2.01
NMD2YHR077C YDR114CQ04597 100 aa2.52□□□□□ -2.01
NMD2YHR077C SNU23Q12368 194 aaPredicted RBP2.52□□□□□ -2.01
NMD2YHR077C YCR101CP25607 182 aa2.51□□□□□ -2.01
NMD2YHR077C RPL14AP36105 138 aaKnown RBP2.51□□□□□ -2.01
NMD2YHR077C PRS2P38620 318 aaKnown RBP2.51□□□□□ -2.01
NMD2YHR077C PRE3P38624 215 aa2.51□□□□□ -2.01
NMD2YHR077C RPL14BP38754 138 aaKnown RBP2.51□□□□□ -2.01
NMD2YHR077C PGD1P40356 397 aa2.51□□□□□ -2.01
NMD2YHR077C DFG10P40526 253 aa2.51□□□□□ -2.01
NMD2YHR077C YIL029CP40538 142 aa2.51□□□□□ -2.01
NMD2YHR077C GTT1P40582 234 aa2.51□□□□□ -2.01
NMD2YHR077C TAF4P50105 388 aa2.51□□□□□ -2.01
NMD2YHR077C PKP2P53170 491 aa2.51□□□□□ -2.01
NMD2YHR077C GIM3P53900 129 aa2.51□□□□□ -2.01
NMD2YHR077C DIG2Q03373 323 aaKnown RBP2.51□□□□□ -2.01
NMD2YHR077C MRL1Q06815 381 aa2.51□□□□□ -2.01
NMD2YHR077C ROX3P25046 220 aa2.51□□□□□ -2.01
NMD2YHR077C CDC50P25656 391 aa2.51□□□□□ -2.01
NMD2YHR077C PIG2P40187 538 aa2.51□□□□□ -2.01
NMD2YHR077C RPL13BP40212 199 aaKnown RBP2.51□□□□□ -2.01
NMD2YHR077C YJL016WP47072 561 aa2.51□□□□□ -2.01
NMD2YHR077C CRR1Q05790 422 aa2.51□□□□□ -2.01
NMD2YHR077C YPR098CQ06089 161 aa2.51□□□□□ -2.01
NMD2YHR077C PIN3Q06449 215 aa2.51□□□□□ -2.01
NMD2YHR077C RAF1Q06891 181 aa2.51□□□□□ -2.01
NMD2YHR077C AIR2Q12476 344 aaKnown RBP2.51□□□□□ -2.01
NMD2YHR077C RPL13AQ12690 199 aaPredicted RBP2.51□□□□□ -2.01
NMD2YHR077C HEM4P06174 275 aa2.51□□□□□ -2.01
NMD2YHR077C OLE1P21147 510 aaKnown RBP2.51□□□□□ -2.01
NMD2YHR077C NTC20P38302 140 aaPredicted RBP2.51□□□□□ -2.01
NMD2YHR077C PEF1P53238 335 aa2.51□□□□□ -2.01
NMD2YHR077C SWT1Q12104 458 aa2.51□□□□□ -2.01
NMD2YHR077C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
NMD2YHR077C TOR2P32600 2474 aaKnown RBP2.51□□□□□ -2.01
NMD2YHR077C RPL7AP05737 244 aaKnown RBP2.5□□□□□ -2.01
NMD2YHR077C GAR1P28007 205 aaKnown RBP2.5□□□□□ -2.01
NMD2YHR077C ECM25P32525 599 aa2.5□□□□□ -2.01
NMD2YHR077C AFR1P33304 620 aa2.5□□□□□ -2.01
NMD2YHR077C MOH1P38191 138 aa2.5□□□□□ -2.01
NMD2YHR077C RMD6P39975 231 aa2.5□□□□□ -2.01
NMD2YHR077C LOC1P43586 204 aaPredicted RBP2.5□□□□□ -2.01
NMD2YHR077C ERG25P53045 309 aa2.5□□□□□ -2.01
NMD2YHR077C YPL077CQ02831 240 aa2.5□□□□□ -2.01
NMD2YHR077C RSM10Q03201 203 aa2.5□□□□□ -2.01
NMD2YHR077C RIM9Q04734 239 aa2.5□□□□□ -2.01
NMD2YHR077C YMR254CQ04838 102 aa2.5□□□□□ -2.01
NMD2YHR077C YPR063CQ12160 140 aa2.5□□□□□ -2.01
NMD2YHR077C RPL7BQ12213 244 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms