RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C MSE1P48525 536 aa10.5□□□□□ -0.73
SHU1YHL006C UBP8P50102 471 aa10.5□□□□□ -0.73
SHU1YHL006C NDE2Q07500 545 aa10.5□□□□□ -0.73
SHU1YHL006C HTZ1Q12692 134 aaKnown RBP10.5□□□□□ -0.73
SHU1YHL006C CYC1P00044 109 aaPredicted RBP10.49□□□□□ -0.73
SHU1YHL006C CPR4P25334 318 aa10.49□□□□□ -0.73
SHU1YHL006C IPI1P38803 334 aaPredicted RBP10.49□□□□□ -0.73
SHU1YHL006C AIM25P47140 327 aa10.49□□□□□ -0.73
SHU1YHL006C CRH1P53301 507 aa10.49□□□□□ -0.73
SHU1YHL006C GIM3P53900 129 aa10.49□□□□□ -0.73
SHU1YHL006C MEH1Q02205 184 aa10.49□□□□□ -0.73
SHU1YHL006C SCP1Q08873 200 aa10.49□□□□□ -0.73
SHU1YHL006C YPL199CQ08954 240 aa10.49□□□□□ -0.73
SHU1YHL006C HTB1P02293 131 aaKnown RBP10.48□□□□□ -0.73
SHU1YHL006C YHR212W-AP0CX91 67 aa10.48□□□□□ -0.73
SHU1YHL006C MSN1P22148 382 aa10.48□□□□□ -0.73
SHU1YHL006C RPD3P32561 433 aa10.48□□□□□ -0.73
SHU1YHL006C VMA8P32610 256 aaKnown RBP10.48□□□□□ -0.73
SHU1YHL006C POP8P38208 133 aa10.48□□□□□ -0.73
SHU1YHL006C HRD1Q08109 551 aa10.48□□□□□ -0.73
SHU1YHL006C RPN13O13563 156 aa10.47□□□□□ -0.73
SHU1YHL006C MRS4P23500 304 aa10.47□□□□□ -0.73
SHU1YHL006C YCP4P25349 247 aaKnown RBP10.47□□□□□ -0.73
SHU1YHL006C PAN3P36102 679 aaPredicted RBP10.47□□□□□ -0.73
SHU1YHL006C YHR138CP38841 114 aaPredicted RBP10.47□□□□□ -0.73
SHU1YHL006C YJL163CP46996 555 aa10.47□□□□□ -0.73
SHU1YHL006C CAB5Q03941 241 aa10.47□□□□□ -0.73
SHU1YHL006C THI74Q04083 370 aa10.47□□□□□ -0.73
SHU1YHL006C VBA1Q04301 562 aa10.47□□□□□ -0.73
SHU1YHL006C STF2P16965 84 aa10.46□□□□□ -0.73
SHU1YHL006C ELO2P25358 347 aa10.46□□□□□ -0.73
SHU1YHL006C UTP11P34247 250 aaPredicted RBP10.46□□□□□ -0.73
SHU1YHL006C IMD3P50095 523 aaKnown RBP10.46□□□□□ -0.73
SHU1YHL006C COX18P53239 316 aa10.46□□□□□ -0.73
SHU1YHL006C VPS63O13549 108 aa10.45□□□□□ -0.74
SHU1YHL006C SPT14P32363 452 aa10.45□□□□□ -0.74
SHU1YHL006C YKL075CP36083 450 aa10.45□□□□□ -0.74
SHU1YHL006C COS8P38723 381 aa10.45□□□□□ -0.74
SHU1YHL006C RTT103Q05543 409 aa10.45□□□□□ -0.74
SHU1YHL006C YLR122CQ12312 125 aa10.45□□□□□ -0.74
SHU1YHL006C YJR112W-AQ3E743 109 aa10.45□□□□□ -0.74
SHU1YHL006C LSM1P47017 172 aaKnown RBP10.44□□□□□ -0.74
SHU1YHL006C LSM7P53905 115 aaKnown RBP10.44□□□□□ -0.74
SHU1YHL006C PBP4Q07362 185 aaKnown RBP10.44□□□□□ -0.74
SHU1YHL006C TAL1P15019 335 aaKnown RBP10.43□□□□□ -0.74
SHU1YHL006C GEP4P38812 185 aa10.43□□□□□ -0.74
SHU1YHL006C TPN1P53099 579 aa10.43□□□□□ -0.74
SHU1YHL006C TOS8P53147 276 aa10.43□□□□□ -0.74
SHU1YHL006C GPM1P00950 247 aaKnown RBP10.42□□□□□ -0.74
SHU1YHL006C NOP1P15646 327 aaKnown RBP10.42□□□□□ -0.74
SHU1YHL006C ATP3P38077 311 aaKnown RBP10.42□□□□□ -0.74
SHU1YHL006C GTF1P53260 183 aaPredicted RBP10.42□□□□□ -0.74
SHU1YHL006C HBN1Q96VH4 193 aa10.42□□□□□ -0.74
SHU1YHL006C HYM1P32464 399 aa10.41□□□□□ -0.74
SHU1YHL006C PHO92Q06390 306 aa10.41□□□□□ -0.74
SHU1YHL006C PRM3Q08931 133 aa10.41□□□□□ -0.74
SHU1YHL006C YPS1P32329 569 aa10.4□□□□□ -0.74
SHU1YHL006C YBR144CP34215 104 aa10.4□□□□□ -0.74
SHU1YHL006C MRPL38P35996 138 aaPredicted RBP10.4□□□□□ -0.74
SHU1YHL006C COX15P40086 486 aa10.4□□□□□ -0.74
SHU1YHL006C SYG1P40528 902 aa10.4□□□□□ -0.74
SHU1YHL006C YHP1Q04116 353 aa10.4□□□□□ -0.74
SHU1YHL006C YOL029CQ08187 201 aa10.4□□□□□ -0.74
SHU1YHL006C IRC23Q08416 157 aa10.4□□□□□ -0.74
SHU1YHL006C YBR255C-AQ3E776 120 aa10.4□□□□□ -0.74
SHU1YHL006C LAG1P38703 411 aa10.39□□□□□ -0.75
SHU1YHL006C RFC2P40348 353 aa10.39□□□□□ -0.75
SHU1YHL006C IRC24P40580 263 aa10.39□□□□□ -0.75
SHU1YHL006C ARP3P47117 449 aaKnown RBP10.39□□□□□ -0.75
SHU1YHL006C SMX3P54999 86 aaPredicted RBP10.39□□□□□ -0.75
SHU1YHL006C FSH2Q05015 223 aa10.39□□□□□ -0.75
SHU1YHL006C ATG5Q12380 294 aa10.39□□□□□ -0.75
SHU1YHL006C LST8P41318 303 aa10.38□□□□□ -0.75
SHU1YHL006C YMR181CQ03231 154 aa10.38□□□□□ -0.75
SHU1YHL006C RKI1Q12189 258 aa10.38□□□□□ -0.75
SHU1YHL006C RDI1Q12434 202 aa10.38□□□□□ -0.75
SHU1YHL006C DFG10P40526 253 aa10.37□□□□□ -0.75
SHU1YHL006C FEX2Q08991 375 aa10.37□□□□□ -0.75
SHU1YHL006C TDH1P00360 332 aaKnown RBP10.36□□□□□ -0.75
SHU1YHL006C QCR2P07257 368 aa10.36□□□□□ -0.75
SHU1YHL006C RTG1P32607 177 aa10.36□□□□□ -0.75
SHU1YHL006C YPT31P38555 223 aaKnown RBP10.36□□□□□ -0.75
SHU1YHL006C SOD1P00445 154 aaKnown RBP10.35□□□□□ -0.75
SHU1YHL006C CAP2P13517 287 aa10.35□□□□□ -0.75
SHU1YHL006C LSM12P38828 187 aaKnown RBP10.35□□□□□ -0.75
SHU1YHL006C YJR012CP47087 207 aa10.35□□□□□ -0.75
SHU1YHL006C ERG25P53045 309 aa10.35□□□□□ -0.75
SHU1YHL006C AIM20P40451 204 aa10.34□□□□□ -0.75
SHU1YHL006C NIF3P53081 288 aa10.34□□□□□ -0.75
SHU1YHL006C YGR219WP53307 113 aa10.34□□□□□ -0.75
SHU1YHL006C PAM18Q07914 168 aa10.34□□□□□ -0.75
SHU1YHL006C YNG1Q08465 219 aa10.34□□□□□ -0.75
SHU1YHL006C MDM10P18409 493 aa10.33□□□□□ -0.76
SHU1YHL006C YCR016WP25617 290 aaKnown RBP10.33□□□□□ -0.76
SHU1YHL006C UTR5P32630 166 aa10.33□□□□□ -0.76
SHU1YHL006C YBR184WP38299 523 aa10.33□□□□□ -0.76
SHU1YHL006C CAB4P53332 305 aa10.33□□□□□ -0.76
SHU1YHL006C HED1Q03937 162 aa10.33□□□□□ -0.76
SHU1YHL006C PRM4Q12498 284 aa10.33□□□□□ -0.76
SHU1YHL006C FEX1Q08913 375 aa10.32□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 96.2 ms