RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W YGR026WP53217 278 aa-0.16□□□□□ -2.43
CSE1YGL238W JLP1Q12358 412 aa-0.16□□□□□ -2.43
CSE1YGL238W YDR010CQ12426 110 aa-0.16□□□□□ -2.43
CSE1YGL238W SGE1P33335 543 aa-0.16□□□□□ -2.43
CSE1YGL238W MSA2P36157 363 aa-0.16□□□□□ -2.43
CSE1YGL238W JNM1P36224 373 aa-0.16□□□□□ -2.43
CSE1YGL238W VMA22P38784 181 aa-0.16□□□□□ -2.43
CSE1YGL238W NOP13P53883 403 aaKnown RBP RIP-Chip data-0.16□□□□□ -2.43not detected
CSE1YGL238W YNL146WP53906 100 aa-0.16□□□□□ -2.43
CSE1YGL238W YNL046WP53956 172 aa-0.16□□□□□ -2.43
CSE1YGL238W ANT1Q06497 328 aa-0.16□□□□□ -2.43
CSE1YGL238W RRS1Q08746 203 aaKnown RBP-0.16□□□□□ -2.43
CSE1YGL238W MCP1Q12106 302 aa-0.16□□□□□ -2.43
CSE1YGL238W PER33Q12144 273 aa-0.16□□□□□ -2.43
CSE1YGL238W YNL146C-AQ3E7Z1 64 aa-0.16□□□□□ -2.43
CSE1YGL238W RPL9AP05738 191 aaKnown RBP-0.16□□□□□ -2.44
CSE1YGL238W COQ1P18900 473 aa-0.16□□□□□ -2.44
CSE1YGL238W YSR3P23501 404 aa-0.16□□□□□ -2.44
CSE1YGL238W STP22P25604 385 aa-0.16□□□□□ -2.44
CSE1YGL238W VMA11P32842 164 aa-0.16□□□□□ -2.44
CSE1YGL238W YER189WP40104 122 aa-0.16□□□□□ -2.44
CSE1YGL238W RPL9BP51401 191 aaKnown RBP-0.16□□□□□ -2.44
CSE1YGL238W YDR210WQ03482 75 aa-0.16□□□□□ -2.44
CSE1YGL238W SPG3Q04398 127 aaPredicted RBP-0.16□□□□□ -2.44
CSE1YGL238W YMR252CQ04814 134 aa-0.16□□□□□ -2.44
CSE1YGL238W YDR278CQ05612 105 aa-0.16□□□□□ -2.44
CSE1YGL238W VAC14Q06708 880 aa-0.16□□□□□ -2.44
CSE1YGL238W ASR1Q06834 288 aa-0.16□□□□□ -2.44
CSE1YGL238W FIT2Q08906 153 aa-0.16□□□□□ -2.44
CSE1YGL238W YPR1Q12458 312 aa-0.16□□□□□ -2.44
CSE1YGL238W MRPL23Q12487 163 aaPredicted RBP-0.16□□□□□ -2.44
CSE1YGL238W HYP2P23301 157 aaKnown RBP-0.17□□□□□ -2.44
CSE1YGL238W POF1P25576 258 aa-0.17□□□□□ -2.44
CSE1YGL238W FZF1P32805 299 aa-0.17□□□□□ -2.44
CSE1YGL238W ECM33P38248 429 aaKnown RBP-0.17□□□□□ -2.44
CSE1YGL238W COX16P47081 118 aa-0.17□□□□□ -2.44
CSE1YGL238W MRH4P53166 561 aa-0.17□□□□□ -2.44
CSE1YGL238W GTR2P53290 341 aa-0.17□□□□□ -2.44
CSE1YGL238W YDR274CP87283 123 aa-0.17□□□□□ -2.44
CSE1YGL238W LCL1Q02786 101 aa-0.17□□□□□ -2.44
CSE1YGL238W YMR209CQ03648 457 aa-0.17□□□□□ -2.44
CSE1YGL238W TRM12Q04235 462 aa-0.17□□□□□ -2.44
CSE1YGL238W YOL160WQ08321 113 aa-0.17□□□□□ -2.44
CSE1YGL238W MDM32Q12171 622 aa-0.17□□□□□ -2.44
CSE1YGL238W SIA1Q12212 622 aa-0.17□□□□□ -2.44
CSE1YGL238W PST2Q12335 198 aaKnown RBP-0.17□□□□□ -2.44
CSE1YGL238W LAS1P36146 502 aaPredicted RBP-0.17□□□□□ -2.44
CSE1YGL238W SRL3P36167 246 aa-0.17□□□□□ -2.44
CSE1YGL238W MRX3P38172 270 aa-0.17□□□□□ -2.44
CSE1YGL238W SFH1Q06168 426 aa-0.17□□□□□ -2.44
CSE1YGL238W YPR172WQ06608 200 aa-0.17□□□□□ -2.44
CSE1YGL238W COQ10Q08058 207 aa-0.17□□□□□ -2.44
CSE1YGL238W YPL162CQ12042 273 aa-0.17□□□□□ -2.44
CSE1YGL238W SME1Q12330 94 aaPredicted RBP-0.17□□□□□ -2.44
CSE1YGL238W ERP4Q12450 207 aa-0.17□□□□□ -2.44
CSE1YGL238W Q0017Q9ZZX8 53 aa-0.17□□□□□ -2.44
CSE1YGL238W YKR104WP0CE69 306 aa-0.18□□□□□ -2.44
CSE1YGL238W TCA17P32613 152 aa-0.18□□□□□ -2.44
CSE1YGL238W YBR096WP38256 230 aa-0.18□□□□□ -2.44
CSE1YGL238W APE4P38821 490 aa-0.18□□□□□ -2.44
CSE1YGL238W YEL008WP40001 126 aa-0.18□□□□□ -2.44
CSE1YGL238W PGD1P40356 397 aa-0.18□□□□□ -2.44
CSE1YGL238W FMP33P46998 180 aa-0.18□□□□□ -2.44
CSE1YGL238W PST1Q12355 444 aa-0.18□□□□□ -2.44
CSE1YGL238W RTR2Q12378 196 aa-0.18□□□□□ -2.44
CSE1YGL238W SNF8Q12483 233 aa-0.18□□□□□ -2.44
CSE1YGL238W YMR316C-AI2HB70 103 aa-0.18□□□□□ -2.44
CSE1YGL238W KIN28P06242 306 aa-0.18□□□□□ -2.44
CSE1YGL238W SOK1P40317 901 aa-0.18□□□□□ -2.44
CSE1YGL238W YFL051CP43552 160 aa-0.18□□□□□ -2.44
CSE1YGL238W YNR077CP53758 84 aa-0.18□□□□□ -2.44
CSE1YGL238W SLD7Q08457 257 aa-0.18□□□□□ -2.44
CSE1YGL238W RRP42Q12277 265 aaPredicted RBP-0.18□□□□□ -2.44
CSE1YGL238W PSF1Q12488 208 aa-0.18□□□□□ -2.44
CSE1YGL238W Q0144Q9ZZW2 109 aa-0.18□□□□□ -2.44
CSE1YGL238W BPH1P25356 2167 aa-0.18□□□□□ -2.44
CSE1YGL238W ERD2P18414 219 aa-0.19□□□□□ -2.44
CSE1YGL238W ANB1P19211 157 aa-0.19□□□□□ -2.44
CSE1YGL238W OCH1P31755 480 aa-0.19□□□□□ -2.44
CSE1YGL238W CLG1P35190 452 aa-0.19□□□□□ -2.44
CSE1YGL238W YPT52P36018 234 aaKnown RBP-0.19□□□□□ -2.44
CSE1YGL238W SWD2P36104 329 aaPredicted RBP-0.19□□□□□ -2.44
CSE1YGL238W RPF1P38805 295 aaKnown RBP-0.19□□□□□ -2.44
CSE1YGL238W MPC2P38857 129 aa-0.19□□□□□ -2.44
CSE1YGL238W PEX17P40155 199 aa-0.19□□□□□ -2.44
CSE1YGL238W RPL33BP41056 107 aaKnown RBP-0.19□□□□□ -2.44
CSE1YGL238W YJR056CP47115 236 aa-0.19□□□□□ -2.44
CSE1YGL238W MGA1P53050 456 aa-0.19□□□□□ -2.44
CSE1YGL238W EOS1P53938 366 aa-0.19□□□□□ -2.44
CSE1YGL238W SXM1Q04175 944 aaKnown RBP-0.19□□□□□ -2.44
CSE1YGL238W YLR413WQ06689 675 aa-0.19□□□□□ -2.44
CSE1YGL238W YOR186WQ08560 144 aa-0.19□□□□□ -2.44
CSE1YGL238W YOL107WQ12239 342 aa-0.19□□□□□ -2.44
CSE1YGL238W BBP1Q12365 385 aa-0.19□□□□□ -2.44
CSE1YGL238W REP2P03872 296 aa-0.19□□□□□ -2.44
CSE1YGL238W DDR48P18899 430 aaKnown RBP-0.19□□□□□ -2.44
CSE1YGL238W PET18P25362 215 aa-0.19□□□□□ -2.44
CSE1YGL238W DAL80P26343 269 aa-0.19□□□□□ -2.44
CSE1YGL238W RFC4P40339 323 aaKnown RBP-0.19□□□□□ -2.44
CSE1YGL238W RSM25P40496 264 aa-0.19□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms