RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C HOF1Q05080 669 aa4.82□□□□□ -1.64
SEC20YDR498C USV1Q12132 391 aa4.82□□□□□ -1.64
SEC20YDR498C COX19Q3E731 98 aa4.82□□□□□ -1.64
SEC20YDR498C HBN1Q96VH4 193 aa4.82□□□□□ -1.64
SEC20YDR498C URA2P07259 2214 aaKnown RBP4.82□□□□□ -1.64
SEC20YDR498C REC104P33323 182 aa4.81□□□□□ -1.64
SEC20YDR498C NTC20P38302 140 aaPredicted RBP4.81□□□□□ -1.64
SEC20YDR498C FLO5P38894 1075 aa4.81□□□□□ -1.64
SEC20YDR498C EMC5P40540 141 aa4.81□□□□□ -1.64
SEC20YDR498C CAF16P43569 289 aa4.81□□□□□ -1.64
SEC20YDR498C UBC13P52490 153 aa4.81□□□□□ -1.64
SEC20YDR498C YGL262WP53054 175 aa4.81□□□□□ -1.64
SEC20YDR498C PKP2P53170 491 aa4.81□□□□□ -1.64
SEC20YDR498C YGR045CP53229 120 aa4.81□□□□□ -1.64
SEC20YDR498C TEX1P53851 422 aaKnown RBP4.81□□□□□ -1.64
SEC20YDR498C APJ1P53940 528 aa4.81□□□□□ -1.64
SEC20YDR498C RIM9Q04734 239 aa4.81□□□□□ -1.64
SEC20YDR498C YMR254CQ04838 102 aa4.81□□□□□ -1.64
SEC20YDR498C MED7Q08278 222 aa4.81□□□□□ -1.64
SEC20YDR498C RPL39P04650 51 aa4.8□□□□□ -1.64
SEC20YDR498C SSA3P09435 649 aaKnown RBP4.8□□□□□ -1.64
SEC20YDR498C YUH1P35127 236 aa4.8□□□□□ -1.64
SEC20YDR498C ERV15P38312 142 aa4.8□□□□□ -1.64
SEC20YDR498C YEA4P40004 342 aa4.8□□□□□ -1.64
SEC20YDR498C RPS0BP46654 252 aaKnown RBP4.8□□□□□ -1.64
SEC20YDR498C SRB7P47822 140 aa4.8□□□□□ -1.64
SEC20YDR498C PEF1P53238 335 aa4.8□□□□□ -1.64
SEC20YDR498C SED1Q01589 338 aa4.8□□□□□ -1.64
SEC20YDR498C ADD37Q03233 198 aa4.8□□□□□ -1.64
SEC20YDR498C UPS1Q05776 175 aa4.8□□□□□ -1.64
SEC20YDR498C CRR1Q05790 422 aa4.8□□□□□ -1.64
SEC20YDR498C SDO1Q07953 250 aaKnown RBP4.8□□□□□ -1.64
SEC20YDR498C PRR2Q12310 699 aa4.8□□□□□ -1.64
SEC20YDR498C AIM45Q12480 344 aaKnown RBP4.8□□□□□ -1.64
SEC20YDR498C BOL1Q3E793 110 aa4.8□□□□□ -1.64
SEC20YDR498C ATG40Q99325 256 aa4.8□□□□□ -1.64
SEC20YDR498C CYC7P00045 113 aa4.79□□□□□ -1.64
SEC20YDR498C TDH1P00360 332 aaKnown RBP4.79□□□□□ -1.64
SEC20YDR498C YML003WP0CF16 290 aa4.79□□□□□ -1.64
SEC20YDR498C ZRC1P20107 442 aa4.79□□□□□ -1.64
SEC20YDR498C ELO2P25358 347 aa4.79□□□□□ -1.64
SEC20YDR498C LDS1P31379 325 aa4.79□□□□□ -1.64
SEC20YDR498C SHM2P37291 469 aaKnown RBP4.79□□□□□ -1.64
SEC20YDR498C SLM6P38343 150 aa4.79□□□□□ -1.64
SEC20YDR498C QRI1P43123 477 aaKnown RBP4.79□□□□□ -1.64
SEC20YDR498C YJR056CP47115 236 aa4.79□□□□□ -1.64
SEC20YDR498C XPT1P47165 209 aa4.79□□□□□ -1.64
SEC20YDR498C CRH1P53301 507 aa4.79□□□□□ -1.64
SEC20YDR498C HSK3P69852 69 aa4.79□□□□□ -1.64
SEC20YDR498C YCL001W-AP87012 153 aa4.79□□□□□ -1.64
SEC20YDR498C GMC1Q04399 608 aa4.79□□□□□ -1.64
SEC20YDR498C DPB4Q04603 196 aaKnown RBP4.79□□□□□ -1.64
SEC20YDR498C YMR253CQ04835 414 aa4.79□□□□□ -1.64
SEC20YDR498C YPL264CQ08980 353 aa4.79□□□□□ -1.64
SEC20YDR498C YOR015WQ12169 119 aa4.79□□□□□ -1.64
SEC20YDR498C YPR145C-AQ2V2P0 78 aa4.79□□□□□ -1.64
SEC20YDR498C PCC1Q3E833 88 aa4.79□□□□□ -1.64
SEC20YDR498C YMR105W-AQ8TGS8 64 aa4.79□□□□□ -1.64
SEC20YDR498C RPL35AP0CX84 120 aaKnown RBP4.78□□□□□ -1.64
SEC20YDR498C RPL35BP0CX85 120 aaKnown RBP4.78□□□□□ -1.64
SEC20YDR498C ERV1P27882 189 aa4.78□□□□□ -1.64
SEC20YDR498C SRB6P32570 121 aa4.78□□□□□ -1.64
SEC20YDR498C VMA8P32610 256 aaKnown RBP4.78□□□□□ -1.64
SEC20YDR498C SPC25P40014 221 aa4.78□□□□□ -1.64
SEC20YDR498C WSC2P53832 503 aa4.78□□□□□ -1.64
SEC20YDR498C HCH1P53834 153 aa4.78□□□□□ -1.64
SEC20YDR498C MRPS17Q03246 237 aaPredicted RBP4.78□□□□□ -1.64
SEC20YDR498C YDL242WQ07746 117 aa4.78□□□□□ -1.64
SEC20YDR498C FCF2Q12035 217 aaPredicted RBP4.78□□□□□ -1.64
SEC20YDR498C FCY22Q12119 530 aa4.78□□□□□ -1.64
SEC20YDR498C GDH1P07262 454 aaKnown RBP4.77□□□□□ -1.65
SEC20YDR498C SPS4P09937 338 aa4.77□□□□□ -1.65
SEC20YDR498C PRE9P23638 258 aaKnown RBP4.77□□□□□ -1.65
SEC20YDR498C ROX3P25046 220 aa4.77□□□□□ -1.65
SEC20YDR498C DAL80P26343 269 aa4.77□□□□□ -1.65
SEC20YDR498C AHT1P29589 182 aa4.77□□□□□ -1.65
SEC20YDR498C MSK1P32048 576 aa4.77□□□□□ -1.65
SEC20YDR498C YKL107WP34251 309 aa4.77□□□□□ -1.65
SEC20YDR498C ECM31P38122 312 aa4.77□□□□□ -1.65
SEC20YDR498C YBR220CP38318 560 aa4.77□□□□□ -1.65
SEC20YDR498C YGP1P38616 354 aaKnown RBP4.77□□□□□ -1.65
SEC20YDR498C CTR2P38865 189 aa4.77□□□□□ -1.65
SEC20YDR498C IKI1P38874 309 aa4.77□□□□□ -1.65
SEC20YDR498C PIC2P40035 300 aa4.77□□□□□ -1.65
SEC20YDR498C PCL7P40186 285 aa4.77□□□□□ -1.65
SEC20YDR498C RPL13BP40212 199 aaKnown RBP4.77□□□□□ -1.65
SEC20YDR498C TOK1P40310 691 aa4.77□□□□□ -1.65
SEC20YDR498C YGR269WP40326 108 aa4.77□□□□□ -1.65
SEC20YDR498C SLM1P40485 686 aa4.77□□□□□ -1.65
SEC20YDR498C DFG10P40526 253 aa4.77□□□□□ -1.65
SEC20YDR498C ARP3P47117 449 aaKnown RBP4.77□□□□□ -1.65
SEC20YDR498C GEP7P53171 287 aa4.77□□□□□ -1.65
SEC20YDR498C ALG12P53730 551 aa4.77□□□□□ -1.65
SEC20YDR498C CAF40P53829 373 aa4.77□□□□□ -1.65
SEC20YDR498C CRZ1P53968 678 aa4.77□□□□□ -1.65
SEC20YDR498C ACS1Q01574 713 aa4.77□□□□□ -1.65
SEC20YDR498C MEH1Q02205 184 aa4.77□□□□□ -1.65
SEC20YDR498C SNA4Q07549 140 aa4.77□□□□□ -1.65
SEC20YDR498C RFM1Q12192 310 aa4.77□□□□□ -1.65
SEC20YDR498C RPL13AQ12690 199 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms