RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W YLR046CQ12253 270 aa0.88□□□□□ -2.27
SCC2YDR180W FRE7Q12333 620 aa0.88□□□□□ -2.27
SCC2YDR180W RAX2Q12465 1220 aa0.88□□□□□ -2.27
SCC2YDR180W YIR021W-AQ3E739 70 aa0.88□□□□□ -2.27
SCC2YDR180W RPS25AQ3E792 108 aaPredicted RBP0.88□□□□□ -2.27
SCC2YDR180W YCR024C-BQ3E7Z8 88 aa0.88□□□□□ -2.27
SCC2YDR180W COA2Q3E823 68 aa0.88□□□□□ -2.27
SCC2YDR180W YER039C-AP0CD97 72 aa0.87□□□□□ -2.27
SCC2YDR180W YLL053CP0CD98 152 aa0.87□□□□□ -2.27
SCC2YDR180W UBC5P15732 148 aa0.87□□□□□ -2.27
SCC2YDR180W AHT1P29589 182 aa0.87□□□□□ -2.27
SCC2YDR180W TRM7P38238 310 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W FLO5P38894 1075 aa0.87□□□□□ -2.27
SCC2YDR180W SNF11P38956 169 aa0.87□□□□□ -2.27
SCC2YDR180W VPS52P39904 641 aa0.87□□□□□ -2.27
SCC2YDR180W MOB1P40484 314 aa0.87□□□□□ -2.27
SCC2YDR180W NIF3P53081 288 aa0.87□□□□□ -2.27
SCC2YDR180W NSA1P53136 463 aaPredicted RBP0.87□□□□□ -2.27
SCC2YDR180W HCH1P53834 153 aa0.87□□□□□ -2.27
SCC2YDR180W SWT21P53873 357 aaPredicted RBP0.87□□□□□ -2.27
SCC2YDR180W VPS28Q02767 242 aa0.87□□□□□ -2.27
SCC2YDR180W RUB1Q03919 77 aa0.87□□□□□ -2.27
SCC2YDR180W CSN9Q03981 162 aa0.87□□□□□ -2.27
SCC2YDR180W POS5Q06892 414 aa0.87□□□□□ -2.27
SCC2YDR180W FSF1Q12029 327 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W NSL1Q12143 216 aa0.87□□□□□ -2.27
SCC2YDR180W JID1Q12350 301 aa0.87□□□□□ -2.27
SCC2YDR180W ORT1Q12375 292 aa0.87□□□□□ -2.27
SCC2YDR180W NBL1Q3E7Y6 73 aa0.87□□□□□ -2.27
SCC2YDR180W CDC39P25655 2108 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W POR1P04840 283 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W RPB5P20434 215 aa0.87□□□□□ -2.27
SCC2YDR180W OCH1P31755 480 aa0.87□□□□□ -2.27
SCC2YDR180W PUB1P32588 453 aaKnown RBP RIP-Chip data0.87□□□□□ -2.27not detected
SCC2YDR180W YHR122WP38829 231 aa0.87□□□□□ -2.27
SCC2YDR180W MTC6P38849 526 aa0.87□□□□□ -2.27
SCC2YDR180W HSP10P38910 106 aa0.87□□□□□ -2.27
SCC2YDR180W TIM17P39515 158 aa0.87□□□□□ -2.27
SCC2YDR180W PRP39P39682 629 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W RRG9P40156 214 aa0.87□□□□□ -2.27
SCC2YDR180W RFC4P40339 323 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W TPS1Q00764 495 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W INM2Q05533 292 aa0.87□□□□□ -2.27
SCC2YDR180W FYV7Q12247 151 aa0.87□□□□□ -2.27
SCC2YDR180W MEX67Q99257 599 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W YDR157WA0A023PZE8 133 aa0.87□□□□□ -2.27
SCC2YDR180W RIP1P08067 215 aa0.87□□□□□ -2.27
SCC2YDR180W RPB8P20436 146 aa0.87□□□□□ -2.27
SCC2YDR180W RPS1BP23248 255 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W HOM6P31116 359 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W SEC17P32602 292 aa0.87□□□□□ -2.27
SCC2YDR180W YKL187CP34231 750 aa0.87□□□□□ -2.27
SCC2YDR180W SRP102P36057 244 aaPredicted RBP0.87□□□□□ -2.27
SCC2YDR180W FYV4P38783 130 aaPredicted RBP0.87□□□□□ -2.27
SCC2YDR180W TRR2P38816 342 aa0.87□□□□□ -2.27
SCC2YDR180W MIG3P39943 394 aa0.87□□□□□ -2.27
SCC2YDR180W HMF1P40037 129 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W GAT2P40209 560 aa0.87□□□□□ -2.27
SCC2YDR180W OTU1P43558 301 aa0.87□□□□□ -2.27
SCC2YDR180W SCW4P53334 386 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W IRC4Q03036 179 aa0.87□□□□□ -2.27
SCC2YDR180W GIM5Q04493 163 aa0.87□□□□□ -2.27
SCC2YDR180W YMR252CQ04814 134 aa0.87□□□□□ -2.27
SCC2YDR180W YMR226CQ05016 267 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W YLR455WQ06188 304 aa0.87□□□□□ -2.27
SCC2YDR180W TAZ1Q06510 381 aa0.87□□□□□ -2.27
SCC2YDR180W YLL056CQ12177 298 aa0.87□□□□□ -2.27
SCC2YDR180W NCE102Q12207 173 aaRIP-Chip data0.87□□□□□ -2.27not detected
SCC2YDR180W SUT2Q12286 268 aa0.87□□□□□ -2.27
SCC2YDR180W RPL13AQ12690 199 aaPredicted RBP0.87□□□□□ -2.27
SCC2YDR180W RPL7AP05737 244 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W NHP6AP11632 93 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W FUN14P18411 198 aa0.87□□□□□ -2.27
SCC2YDR180W RPS2P25443 254 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W HMX1P32339 317 aa0.87□□□□□ -2.27
SCC2YDR180W SRB6P32570 121 aa0.87□□□□□ -2.27
SCC2YDR180W SSS1P35179 80 aa0.87□□□□□ -2.27
SCC2YDR180W YAR068WP39564 161 aa0.87□□□□□ -2.27
SCC2YDR180W DLS1P40366 167 aa0.87□□□□□ -2.27
SCC2YDR180W AYR1P40471 297 aa0.87□□□□□ -2.27
SCC2YDR180W CUP9P41817 306 aa0.87□□□□□ -2.27
SCC2YDR180W RPA43P46669 326 aa0.87□□□□□ -2.27
SCC2YDR180W ADO1P47143 340 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W YIP3P53633 176 aa0.87□□□□□ -2.27
SCC2YDR180W YPL077CQ02831 240 aa0.87□□□□□ -2.27
SCC2YDR180W CGI121Q03705 181 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W YDR391CQ04170 232 aa0.87□□□□□ -2.27
SCC2YDR180W VBA1Q04301 562 aa0.87□□□□□ -2.27
SCC2YDR180W UTP15Q04305 513 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W TMN2Q04562 672 aa0.87□□□□□ -2.27
SCC2YDR180W FCF1Q05498 189 aaPredicted RBP0.87□□□□□ -2.27
SCC2YDR180W COQ11Q05892 277 aa0.87□□□□□ -2.27
SCC2YDR180W ARC18Q05933 178 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W SNT309Q06091 175 aaPredicted RBP0.87□□□□□ -2.27
SCC2YDR180W MCH4Q08268 501 aa0.87□□□□□ -2.27
SCC2YDR180W RPL7BQ12213 244 aaKnown RBP0.87□□□□□ -2.27
SCC2YDR180W PRM4Q12498 284 aa0.87□□□□□ -2.27
SCC2YDR180W HAP3P13434 144 aa0.86□□□□□ -2.27
SCC2YDR180W MAK32P23060 363 aa0.86□□□□□ -2.27
SCC2YDR180W ERG9P29704 444 aa0.86□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms