RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeastyeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK1YDR006C YER188WP40103 239 aa2.32□□□□□ -2.04
SOK1YDR006C YIL152WP40455 235 aa2.32□□□□□ -2.04
SOK1YDR006C ATG18P43601 500 aa2.32□□□□□ -2.04
SOK1YDR006C BAT2P47176 376 aaKnown RBP2.32□□□□□ -2.04
SOK1YDR006C YPL039WQ03080 316 aa2.32□□□□□ -2.04
SOK1YDR006C UBR1P19812 1950 aa2.32□□□□□ -2.04
SOK1YDR006C NSP1P14907 823 aaKnown RBP2.32□□□□□ -2.04
SOK1YDR006C MRS4P23500 304 aa2.32□□□□□ -2.04
SOK1YDR006C RFS1P38234 210 aaKnown RBP2.32□□□□□ -2.04
SOK1YDR006C RPF1P38805 295 aaKnown RBP2.32□□□□□ -2.04
SOK1YDR006C YJL213WP40896 331 aa2.32□□□□□ -2.04
SOK1YDR006C CAT5P41735 233 aa2.32□□□□□ -2.04
SOK1YDR006C YFL019CP43576 117 aa2.32□□□□□ -2.04
SOK1YDR006C YGR015CP53208 328 aa2.32□□□□□ -2.04
SOK1YDR006C TDA7P53882 636 aaPredicted RBP2.32□□□□□ -2.04
SOK1YDR006C RHO3Q00245 231 aaKnown RBP2.32□□□□□ -2.04
SOK1YDR006C YDR102CQ03864 110 aa2.32□□□□□ -2.04
SOK1YDR006C YMR244WQ04018 355 aa2.32□□□□□ -2.04
SOK1YDR006C FMP42Q04991 504 aa2.32□□□□□ -2.04
SOK1YDR006C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
SOK1YDR006C SNX3Q08826 162 aaKnown RBP2.32□□□□□ -2.04
SOK1YDR006C ERV2Q12284 196 aa2.32□□□□□ -2.04
SOK1YDR006C OCA6Q12454 224 aa2.32□□□□□ -2.04
SOK1YDR006C YER078W-AQ3E7A2 54 aa2.32□□□□□ -2.04
SOK1YDR006C YDL085C-AQ3E7B7 68 aaKnown RBP2.32□□□□□ -2.04
SOK1YDR006C TRS65P32893 560 aa2.31□□□□□ -2.04
SOK1YDR006C SHB17P36136 271 aaKnown RBP2.31□□□□□ -2.04
SOK1YDR006C SWD3P38123 315 aa2.31□□□□□ -2.04
SOK1YDR006C POP4P38336 279 aa2.31□□□□□ -2.04
SOK1YDR006C GGC1P38988 300 aa2.31□□□□□ -2.04
SOK1YDR006C YER181CP40097 107 aa2.31□□□□□ -2.04
SOK1YDR006C COG7P53195 279 aa2.31□□□□□ -2.04
SOK1YDR006C BOR1P53838 576 aa2.31□□□□□ -2.04
SOK1YDR006C PIR3Q03180 325 aa2.31□□□□□ -2.04
SOK1YDR006C YMR252CQ04814 134 aa2.31□□□□□ -2.04
SOK1YDR006C YLR177WQ06251 628 aa2.31□□□□□ -2.04
SOK1YDR006C AKR2Q12013 749 aa2.31□□□□□ -2.04
SOK1YDR006C RTR2Q12378 196 aa2.31□□□□□ -2.04
SOK1YDR006C DGK1Q12382 290 aa2.31□□□□□ -2.04
SOK1YDR006C YOR1P53049 1477 aa2.31□□□□□ -2.04
SOK1YDR006C MBF1O14467 151 aaKnown RBP2.31□□□□□ -2.04
SOK1YDR006C SGA1P08019 549 aa2.31□□□□□ -2.04
SOK1YDR006C RPS20P38701 121 aaKnown RBP2.31□□□□□ -2.04
SOK1YDR006C YHR140WP38842 239 aa2.31□□□□□ -2.04
SOK1YDR006C DFG10P40526 253 aa2.31□□□□□ -2.04
SOK1YDR006C XPT1P47165 209 aa2.31□□□□□ -2.04
SOK1YDR006C CWC27Q02770 301 aa2.31□□□□□ -2.04
SOK1YDR006C TMA23Q03525 211 aa2.31□□□□□ -2.04
SOK1YDR006C CMD1P06787 147 aaKnown RBP2.3□□□□□ -2.04
SOK1YDR006C SPS2P08459 502 aa2.3□□□□□ -2.04
SOK1YDR006C DDI2P0CH63 225 aa2.3□□□□□ -2.04
SOK1YDR006C DDI3P0CH64 225 aa2.3□□□□□ -2.04
SOK1YDR006C MSI1P13712 422 aa2.3□□□□□ -2.04
SOK1YDR006C COX10P21592 462 aa2.3□□□□□ -2.04
SOK1YDR006C PAN3P36102 679 aaPredicted RBP2.3□□□□□ -2.04
SOK1YDR006C MSA2P36157 363 aa2.3□□□□□ -2.04
SOK1YDR006C MRP21P38175 177 aa2.3□□□□□ -2.04
SOK1YDR006C YND1P40009 630 aa2.3□□□□□ -2.04
SOK1YDR006C TDA4P47153 279 aa2.3□□□□□ -2.04
SOK1YDR006C MDM34P53083 459 aa2.3□□□□□ -2.04
SOK1YDR006C DML1Q03652 475 aa2.3□□□□□ -2.04
SOK1YDR006C YMR254CQ04838 102 aa2.3□□□□□ -2.04
SOK1YDR006C ATX2Q12067 313 aa2.3□□□□□ -2.04
SOK1YDR006C PSF1Q12488 208 aa2.3□□□□□ -2.04
SOK1YDR006C YIL177CP40434 1758 aa2.3□□□□□ -2.04
SOK1YDR006C YJL225CP40889 1758 aa2.3□□□□□ -2.04
SOK1YDR006C MPM1P40364 252 aa2.3□□□□□ -2.04
SOK1YDR006C RPE1P46969 238 aa2.3□□□□□ -2.04
SOK1YDR006C GEP7P53171 287 aa2.3□□□□□ -2.04
SOK1YDR006C LPP1Q04396 274 aa2.3□□□□□ -2.04
SOK1YDR006C ZEO1Q08245 113 aa2.3□□□□□ -2.04
SOK1YDR006C FYV12Q08559 129 aa2.3□□□□□ -2.04
SOK1YDR006C TRP1P00912 224 aa2.29□□□□□ -2.04
SOK1YDR006C DDR48P18899 430 aaKnown RBP2.29□□□□□ -2.04
SOK1YDR006C CKS1P20486 150 aaKnown RBP2.29□□□□□ -2.04
SOK1YDR006C SHE2P36068 246 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
SOK1YDR006C VMA7P39111 118 aa2.29□□□□□ -2.04
SOK1YDR006C YAR029WP39549 74 aa2.29□□□□□ -2.04
SOK1YDR006C YER134CP40081 178 aa2.29□□□□□ -2.04
SOK1YDR006C MNN5P46982 586 aa2.29□□□□□ -2.04
SOK1YDR006C YGL039WP53183 348 aaKnown RBP2.29□□□□□ -2.04
SOK1YDR006C RPB3P16370 318 aaKnown RBP2.29□□□□□ -2.04
SOK1YDR006C MAK31P23059 88 aa2.29□□□□□ -2.04
SOK1YDR006C SMP1P38128 452 aa2.29□□□□□ -2.04
SOK1YDR006C RNH202Q05635 350 aa2.29□□□□□ -2.04
SOK1YDR006C HRT1Q08273 121 aa2.29□□□□□ -2.04
SOK1YDR006C YPL162CQ12042 273 aa2.29□□□□□ -2.04
SOK1YDR006C SLO1Q3E784 85 aa2.29□□□□□ -2.04
SOK1YDR006C YAR066WP0CX18 203 aa2.28□□□□□ -2.04
SOK1YDR006C YHR214WP0CX19 203 aa2.28□□□□□ -2.04
SOK1YDR006C CSE2P33308 149 aa2.28□□□□□ -2.04
SOK1YDR006C YBR242WP38331 238 aa2.28□□□□□ -2.04
SOK1YDR006C AYR1P40471 297 aa2.28□□□□□ -2.04
SOK1YDR006C MEP2P41948 499 aa2.28□□□□□ -2.04
SOK1YDR006C YNL320WP42840 284 aa2.28□□□□□ -2.04
SOK1YDR006C SNO3P43544 222 aa2.28□□□□□ -2.04
SOK1YDR006C GOT1Q03554 138 aa2.28□□□□□ -2.04
SOK1YDR006C YDR124WQ04608 324 aa2.28□□□□□ -2.04
SOK1YDR006C ERP1Q05359 219 aaKnown RBP2.28□□□□□ -2.04
SOK1YDR006C CNL1Q06333 122 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms