RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.09□□□□□ -2.23not detected
MSH3YCR092C FRE8Q12209 686 aa1.09□□□□□ -2.23
MSH3YCR092C YPR108W-AQ3E7B3 70 aa1.09□□□□□ -2.23
MSH3YCR092C YLR415CO13578 112 aa1.09□□□□□ -2.24
MSH3YCR092C MIR1P23641 311 aaKnown RBP1.09□□□□□ -2.24
MSH3YCR092C KRR1P25586 316 aaPredicted RBP1.09□□□□□ -2.24
MSH3YCR092C NDC1P32500 655 aa1.09□□□□□ -2.24
MSH3YCR092C SFK1P35735 353 aa1.09□□□□□ -2.24
MSH3YCR092C YRA2P36036 203 aaKnown RBP RIP-Chip data1.09□□□□□ -2.24not detected
MSH3YCR092C MRPL27P36526 146 aaPredicted RBP1.09□□□□□ -2.24
MSH3YCR092C YHR138CP38841 114 aaPredicted RBP1.09□□□□□ -2.24
MSH3YCR092C SNF11P38956 169 aa1.09□□□□□ -2.24
MSH3YCR092C YAR029WP39549 74 aa1.09□□□□□ -2.24
MSH3YCR092C AZF1P41696 914 aa1.09□□□□□ -2.24
MSH3YCR092C YFR054CP43622 192 aa1.09□□□□□ -2.24
MSH3YCR092C TMA22P47089 198 aaPredicted RBP1.09□□□□□ -2.24
MSH3YCR092C RBL2P48606 106 aaKnown RBP1.09□□□□□ -2.24
MSH3YCR092C GIM3P53900 129 aa1.09□□□□□ -2.24
MSH3YCR092C ACT1P60010 375 aaKnown RBP1.09□□□□□ -2.24
MSH3YCR092C TPS1Q00764 495 aaKnown RBP1.09□□□□□ -2.24
MSH3YCR092C TSA2Q04120 196 aa1.09□□□□□ -2.24
MSH3YCR092C HNT1Q04344 158 aaKnown RBP1.09□□□□□ -2.24
MSH3YCR092C GRH1Q04410 372 aaKnown RBP1.09□□□□□ -2.24
MSH3YCR092C BCP1Q06338 283 aa1.09□□□□□ -2.24
MSH3YCR092C YCR075W-AQ3E830 75 aa1.09□□□□□ -2.24
MSH3YCR092C YHR212W-AP0CX91 67 aa1.08□□□□□ -2.24
MSH3YCR092C YHK8P38776 514 aa1.08□□□□□ -2.24
MSH3YCR092C POR2P40478 281 aa1.08□□□□□ -2.24
MSH3YCR092C MRPL49P40858 161 aaPredicted RBP1.08□□□□□ -2.24
MSH3YCR092C SWP82P43554 623 aa1.08□□□□□ -2.24
MSH3YCR092C FIP1P45976 327 aa1.08□□□□□ -2.24
MSH3YCR092C PRM8P53174 237 aa1.08□□□□□ -2.24
MSH3YCR092C GPI1P53306 609 aa1.08□□□□□ -2.24
MSH3YCR092C TIM18Q08749 192 aa1.08□□□□□ -2.24
MSH3YCR092C ATX2Q12067 313 aa1.08□□□□□ -2.24
MSH3YCR092C APC9Q12107 265 aa1.08□□□□□ -2.24
MSH3YCR092C CSF1Q12150 2958 aa1.08□□□□□ -2.24
MSH3YCR092C HMS1Q12398 434 aa1.08□□□□□ -2.24
MSH3YCR092C SNF8Q12483 233 aa1.08□□□□□ -2.24
MSH3YCR092C RPL2AP0CX45 254 aaKnown RBP1.08□□□□□ -2.24
MSH3YCR092C RPL2BP0CX46 254 aaKnown RBP1.08□□□□□ -2.24
MSH3YCR092C ARO2P28777 376 aaKnown RBP1.08□□□□□ -2.24
MSH3YCR092C VPH2P32341 215 aa1.08□□□□□ -2.24
MSH3YCR092C ARO4P32449 370 aaKnown RBP1.08□□□□□ -2.24
MSH3YCR092C TRS20P38334 175 aa1.08□□□□□ -2.24
MSH3YCR092C MDM31P38880 579 aa1.08□□□□□ -2.24
MSH3YCR092C DLS1P40366 167 aa1.08□□□□□ -2.24
MSH3YCR092C SAY1P53324 424 aa1.08□□□□□ -2.24
MSH3YCR092C BUD17P53727 317 aa1.08□□□□□ -2.24
MSH3YCR092C ALG9P53868 555 aaKnown RBP1.08□□□□□ -2.24
MSH3YCR092C RPL21AQ02753 160 aaKnown RBP1.08□□□□□ -2.24
MSH3YCR092C SGF11Q03067 99 aa1.08□□□□□ -2.24
MSH3YCR092C YLR179CQ06252 201 aaKnown RBP1.08□□□□□ -2.24
MSH3YCR092C ATG17Q06410 417 aa1.08□□□□□ -2.24
MSH3YCR092C ENV7Q12003 364 aa1.08□□□□□ -2.24
MSH3YCR092C DCP1Q12517 231 aaPredicted RBP1.08□□□□□ -2.24
MSH3YCR092C RPL21BQ12672 160 aaKnown RBP1.08□□□□□ -2.24
MSH3YCR092C CYC3P06182 269 aa1.07□□□□□ -2.24
MSH3YCR092C PMR1P13586 950 aa1.07□□□□□ -2.24
MSH3YCR092C MEK1P24719 497 aaPredicted RBP1.07□□□□□ -2.24
MSH3YCR092C RAD23P32628 398 aaKnown RBP1.07□□□□□ -2.24
MSH3YCR092C SLM4P38247 162 aa1.07□□□□□ -2.24
MSH3YCR092C YGR210CP42942 411 aa1.07□□□□□ -2.24
MSH3YCR092C NIT2P47016 307 aa1.07□□□□□ -2.24
MSH3YCR092C RPL9BP51401 191 aaKnown RBP1.07□□□□□ -2.24
MSH3YCR092C NIF3P53081 288 aa1.07□□□□□ -2.24
MSH3YCR092C USE1P53146 245 aa1.07□□□□□ -2.24
MSH3YCR092C SDH7Q04401 133 aa1.07□□□□□ -2.24
MSH3YCR092C YOR186WQ08560 144 aa1.07□□□□□ -2.24
MSH3YCR092C TFC7Q12415 435 aa1.07□□□□□ -2.24
MSH3YCR092C YPR145C-AQ2V2P0 78 aa1.07□□□□□ -2.24
MSH3YCR092C RPL9AP05738 191 aaKnown RBP1.07□□□□□ -2.24
MSH3YCR092C RPL12AP0CX53 165 aaKnown RBP1.07□□□□□ -2.24
MSH3YCR092C RPL12BP0CX54 165 aa1.07□□□□□ -2.24
MSH3YCR092C STF2P16965 84 aa1.07□□□□□ -2.24
MSH3YCR092C YCR100CP25606 316 aa1.07□□□□□ -2.24
MSH3YCR092C RPL5P26321 297 aaKnown RBP1.07□□□□□ -2.24
MSH3YCR092C PAN3P36102 679 aaPredicted RBP1.07□□□□□ -2.24
MSH3YCR092C ECM4P36156 370 aa1.07□□□□□ -2.24
MSH3YCR092C SWD3P38123 315 aa1.07□□□□□ -2.24
MSH3YCR092C CDS1P38221 457 aa1.07□□□□□ -2.24
MSH3YCR092C PHO90P39535 881 aa1.07□□□□□ -2.24
MSH3YCR092C ERG28P40030 148 aa1.07□□□□□ -2.24
MSH3YCR092C LSM4P40070 187 aaKnown RBP1.07□□□□□ -2.24
MSH3YCR092C BNA2P47125 453 aa1.07□□□□□ -2.24
MSH3YCR092C UBC11P52492 156 aa1.07□□□□□ -2.24
MSH3YCR092C YMD8Q03697 442 aa1.07□□□□□ -2.24
MSH3YCR092C LPP1Q04396 274 aa1.07□□□□□ -2.24
MSH3YCR092C MSH5Q12175 901 aa1.07□□□□□ -2.24
MSH3YCR092C MED4Q12343 284 aa1.07□□□□□ -2.24
MSH3YCR092C SIR2P06700 562 aa1.07□□□□□ -2.24
MSH3YCR092C PUT1P09368 476 aa1.07□□□□□ -2.24
MSH3YCR092C IMP1P28627 190 aa1.07□□□□□ -2.24
MSH3YCR092C RPC34P32910 317 aa1.07□□□□□ -2.24
MSH3YCR092C SHB17P36136 271 aaKnown RBP1.07□□□□□ -2.24
MSH3YCR092C SHE1P38200 338 aa1.07□□□□□ -2.24
MSH3YCR092C ECM34P38728 170 aa1.07□□□□□ -2.24
MSH3YCR092C GEP4P38812 185 aa1.07□□□□□ -2.24
MSH3YCR092C WSS1P38838 269 aa1.07□□□□□ -2.24
MSH3YCR092C NVJ1P38881 321 aa1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms