RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCL020WYCL020W CWC23P52868 283 aaPredicted RBP1.03□□□□□ -2.24
YCL020WYCL020W JLP1Q12358 412 aa1.03□□□□□ -2.24
YCL020WYCL020W FAS1P07149 2051 aaKnown RBP1.03□□□□□ -2.24
YCL020WYCL020W CDC33P07260 213 aaKnown RBP1.02□□□□□ -2.25
YCL020WYCL020W PDR17P53844 350 aa1.02□□□□□ -2.25
YCL020WYCL020W RAD28Q12021 506 aa1.02□□□□□ -2.25
YCL020WYCL020W YNL146C-AQ3E7Z1 64 aa1.02□□□□□ -2.25
YCL020WYCL020W RPL27AP0C2H6 136 aaKnown RBP1.01□□□□□ -2.25
YCL020WYCL020W MER1P16523 270 aa1.01□□□□□ -2.25
YCL020WYCL020W TFC1P32367 649 aa1.01□□□□□ -2.25
YCL020WYCL020W TVP38P36164 337 aa1.01□□□□□ -2.25
YCL020WYCL020W YBR209WP38311 105 aa1.01□□□□□ -2.25
YCL020WYCL020W YBR285WP38354 144 aa1.01□□□□□ -2.25
YCL020WYCL020W RPL37AP49166 88 aaKnown RBP1.01□□□□□ -2.25
YCL020WYCL020W GIS3Q12418 502 aa1.01□□□□□ -2.25
YCL020WYCL020W URA5P13298 226 aaKnown RBP1□□□□□ -2.25
YCL020WYCL020W RPB3P16370 318 aaKnown RBP1□□□□□ -2.25
YCL020WYCL020W COQ1P18900 473 aa1□□□□□ -2.25
YCL020WYCL020W RIO2P40160 425 aaKnown RBP1□□□□□ -2.25
YCL020WYCL020W MPC3P53311 146 aa1□□□□□ -2.25
YCL020WYCL020W YDL180WQ12301 547 aa1□□□□□ -2.25
YCL020WYCL020W NSP1P14907 823 aaKnown RBP0.99□□□□□ -2.25
YCL020WYCL020W SEC11P15367 167 aa0.99□□□□□ -2.25
YCL020WYCL020W STE18P18852 110 aa0.99□□□□□ -2.25
YCL020WYCL020W TAF14P35189 244 aa0.99□□□□□ -2.25
YCL020WYCL020W MSS2P40990 351 aa0.99□□□□□ -2.25
YCL020WYCL020W GCN20P43535 752 aaKnown RBP0.99□□□□□ -2.25
YCL020WYCL020W TIM11P81449 96 aaPredicted RBP0.99□□□□□ -2.25
YCL020WYCL020W RNH1Q04740 348 aa0.99□□□□□ -2.25
YCL020WYCL020W SLH1P53327 1967 aaKnown RBP0.99□□□□□ -2.25
YCL020WYCL020W YEL067CP39978 195 aa0.98□□□□□ -2.25
YCL020WYCL020W CUS2P53830 285 aaPredicted RBP0.98□□□□□ -2.25
YCL020WYCL020W LSM7P53905 115 aaKnown RBP0.98□□□□□ -2.25
YCL020WYCL020W YNG1Q08465 219 aa0.98□□□□□ -2.25
YCL020WYCL020W RUD3Q12234 484 aaKnown RBP0.98□□□□□ -2.25
YCL020WYCL020W NCB2Q92317 146 aa0.98□□□□□ -2.25
YCL020WYCL020W TVP23P38962 199 aa0.97□□□□□ -2.25
YCL020WYCL020W YPL073CP40323 161 aa0.97□□□□□ -2.25
YCL020WYCL020W YRB1P41920 201 aaKnown RBP0.97□□□□□ -2.25
YCL020WYCL020W JIP3O13555 125 aa0.96□□□□□ -2.26
YCL020WYCL020W RPL25P04456 142 aaKnown RBP0.96□□□□□ -2.26
YCL020WYCL020W YHR212W-AP0CX91 67 aa0.96□□□□□ -2.26
YCL020WYCL020W AIM25P47140 327 aa0.96□□□□□ -2.26
YCL020WYCL020W COG5P53951 403 aa0.96□□□□□ -2.26
YCL020WYCL020W CUE4Q04201 117 aaPredicted RBP0.96□□□□□ -2.26
YCL020WYCL020W POR1P04840 283 aaKnown RBP0.95□□□□□ -2.26
YCL020WYCL020W SPO13P23624 291 aa0.95□□□□□ -2.26
YCL020WYCL020W SHE2P36068 246 aaKnown RBP RIP-Chip data0.95□□□□□ -2.26not detected
YCL020WYCL020W OPY1P38271 328 aa0.95□□□□□ -2.26
YCL020WYCL020W HUA1P40325 198 aa0.95□□□□□ -2.26
YCL020WYCL020W IRC18P47056 224 aa0.95□□□□□ -2.26
YCL020WYCL020W KDX1P36005 433 aa0.94□□□□□ -2.26
YCL020WYCL020W YCR087C-AP37263 153 aa0.94□□□□□ -2.26
YCL020WYCL020W PGA2P53903 129 aa0.94□□□□□ -2.26
YCL020WYCL020W IKI3Q06706 1349 aaKnown RBP0.94□□□□□ -2.26
YCL020WYCL020W CKS1P20486 150 aaKnown RBP0.93□□□□□ -2.26
YCL020WYCL020W ARO8P53090 500 aaKnown RBP0.93□□□□□ -2.26
YCL020WYCL020W YNL247WP53852 767 aaKnown RBP0.93□□□□□ -2.26
YCL020WYCL020W GRX3Q03835 250 aa0.93□□□□□ -2.26
YCL020WYCL020W GGA1Q06336 557 aa0.93□□□□□ -2.26
YCL020WYCL020W YRA1Q12159 226 aaKnown RBP0.93□□□□□ -2.26
YCL020WYCL020W MAG1P22134 296 aaKnown RBP0.92□□□□□ -2.26
YCL020WYCL020W YCL042WP25572 119 aa0.92□□□□□ -2.26
YCL020WYCL020W RFA3P26755 122 aaKnown RBP0.92□□□□□ -2.26
YCL020WYCL020W HMF1P40037 129 aaKnown RBP0.92□□□□□ -2.26
YCL020WYCL020W YAE1P47118 141 aaPredicted RBP0.92□□□□□ -2.26
YCL020WYCL020W HNT1Q04344 158 aaKnown RBP0.92□□□□□ -2.26
YCL020WYCL020W MDM32Q12171 622 aa0.92□□□□□ -2.26
YCL020WYCL020W RPB4P20433 221 aaPredicted RBP0.91□□□□□ -2.26
YCL020WYCL020W OCH1P31755 480 aa0.91□□□□□ -2.26
YCL020WYCL020W PAN3P36102 679 aaPredicted RBP0.91□□□□□ -2.26
YCL020WYCL020W IKI1P38874 309 aa0.91□□□□□ -2.26
YCL020WYCL020W YEL008WP40001 126 aa0.91□□□□□ -2.26
YCL020WYCL020W YER034WP40022 185 aaKnown RBP0.91□□□□□ -2.26
YCL020WYCL020W SOK1P40317 901 aa0.91□□□□□ -2.26
YCL020WYCL020W FLX1P40464 311 aa0.91□□□□□ -2.26
YCL020WYCL020W ERG10P41338 398 aaKnown RBP0.91□□□□□ -2.26
YCL020WYCL020W YHR007C-AQ07074 71 aa0.91□□□□□ -2.26
YCL020WYCL020W DGA1Q08650 418 aa0.91□□□□□ -2.26
YCL020WYCL020W YCL012CQ8J0M4 134 aa0.91□□□□□ -2.26
YCL020WYCL020W CDC36P06100 191 aaPredicted RBP0.9□□□□□ -2.26
YCL020WYCL020W YKT6P36015 200 aaKnown RBP0.9□□□□□ -2.26
YCL020WYCL020W TRM5P38793 499 aa0.9□□□□□ -2.26
YCL020WYCL020W YFL065CP43539 102 aa0.9□□□□□ -2.26
YCL020WYCL020W YMR099CQ03161 297 aaKnown RBP0.9□□□□□ -2.26
YCL020WYCL020W BNA7Q04066 261 aa0.9□□□□□ -2.26
YCL020WYCL020W YPR174CQ06616 221 aaPredicted RBP0.9□□□□□ -2.26
YCL020WYCL020W FIT2Q08906 153 aa0.9□□□□□ -2.26
YCL020WYCL020W MDM35O60200 86 aa0.89□□□□□ -2.27
YCL020WYCL020W HTB1P02293 131 aaKnown RBP0.89□□□□□ -2.27
YCL020WYCL020W HTB2P02294 131 aa0.89□□□□□ -2.27
YCL020WYCL020W NTG1P31378 399 aa0.89□□□□□ -2.27
YCL020WYCL020W YHL018WP38744 120 aaPredicted RBP0.89□□□□□ -2.27
YCL020WYCL020W HYR1P40581 163 aaKnown RBP0.89□□□□□ -2.27
YCL020WYCL020W CWC21Q03375 135 aaKnown RBP0.89□□□□□ -2.27
YCL020WYCL020W RCE1Q03530 315 aa0.89□□□□□ -2.27
YCL020WYCL020W ABP140Q08641 628 aaKnown RBP0.89□□□□□ -2.27
YCL020WYCL020W ADF1Q2V2Q1 113 aa0.89□□□□□ -2.27
YCL020WYCL020W CBF1P17106 351 aa0.89□□□□□ -2.27
YCL020WYCL020W CNB1P25296 175 aa0.89□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms