RNA–Protein interactions for RNA: snR30

snR30, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR30, Length 606 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR30snR30 YKL222CP35995 705 aa8.89□□□□□ -0.99
snR30snR30 BCH2P36122 765 aa8.89□□□□□ -0.99
snR30snR30 SCY1P53009 804 aa8.89□□□□□ -0.99
snR30snR30 SWI1P09547 1314 aa8.87□□□□□ -0.99
snR30snR30 RPP0P05317 312 aaKnown RBP8.87□□□□□ -0.99
snR30snR30 CAF20P12962 161 aaKnown RBP8.87□□□□□ -0.99
snR30snR30 PFF1P38244 976 aa8.87□□□□□ -0.99
snR30snR30 BDF2Q07442 638 aa8.87□□□□□ -0.99
snR30snR30 PMD1P32634 1753 aa8.86□□□□□ -0.99
snR30snR30 YDR306CQ06640 478 aa8.86□□□□□ -0.99
snR30snR30 VPS27P40343 622 aaKnown RBP8.85□□□□□ -0.99
snR30snR30 FCP1Q03254 732 aa8.85□□□□□ -0.99
snR30snR30 YLR271WQ06152 274 aa8.85□□□□□ -0.99
snR30snR30 SSK22P25390 1331 aaPredicted RBP8.84□□□□□ -0.99
snR30snR30 YGR122WP53272 402 aa8.84□□□□□ -0.99
snR30snR30 SQS1P53866 767 aaKnown RBP8.84□□□□□ -0.99
snR30snR30 DNM1P54861 757 aa8.84□□□□□ -0.99
snR30snR30 PKH1Q03407 766 aa8.84□□□□□ -0.99
snR30snR30 IRC3Q06683 689 aa8.84□□□□□ -0.99
snR30snR30 NUP133P36161 1157 aa8.83□□□□□ -1
snR30snR30 CST6P40535 587 aa8.83□□□□□ -1
snR30snR30 UBP16Q02863 499 aa8.83□□□□□ -1
snR30snR30 ERO1Q03103 563 aa8.83□□□□□ -1
snR30snR30 MRP7P12687 371 aa8.82□□□□□ -1
snR30snR30 DIB1Q06819 143 aaPredicted RBP8.82□□□□□ -1
snR30snR30 CDC45Q08032 650 aa8.82□□□□□ -1
snR30snR30 HAT1Q12341 374 aa8.82□□□□□ -1
snR30snR30 YJR008WP47085 338 aa8.81□□□□□ -1
snR30snR30 RVB2Q12464 471 aaKnown RBP8.81□□□□□ -1
snR30snR30 NSR1P27476 414 aaKnown RBP RIP-Chip data8.8□□□□□ -1not detected
snR30snR30 RAD24P32641 659 aa8.8□□□□□ -1
snR30snR30 SLX5P32828 619 aaKnown RBP8.8□□□□□ -1
snR30snR30 TOP1P04786 769 aa8.79□□□□□ -1
snR30snR30 SIT4P20604 311 aa8.79□□□□□ -1
snR30snR30 ICL1P28240 557 aaPredicted RBP8.79□□□□□ -1
snR30snR30 SWC3P31376 625 aa8.79□□□□□ -1
snR30snR30 FRD1P32614 470 aaKnown RBP8.79□□□□□ -1
snR30snR30 RPN1P38764 993 aaKnown RBP8.79□□□□□ -1
snR30snR30 SET1P38827 1080 aaKnown RBP8.77□□□□□ -1.01
snR30snR30 TIF4632P39936 914 aaKnown RBP8.77□□□□□ -1.01
snR30snR30 RSM7P47150 247 aa8.77□□□□□ -1.01
snR30snR30 SAS4Q04003 481 aa8.77□□□□□ -1.01
snR30snR30 SYF1Q04048 859 aaPredicted RBP8.77□□□□□ -1.01
snR30snR30 PRS1P32895 427 aaKnown RBP8.76□□□□□ -1.01
snR30snR30 YPP1P46951 817 aa8.76□□□□□ -1.01
snR30snR30 ITC1P53125 1264 aa8.76□□□□□ -1.01
snR30snR30 CSI1Q04368 295 aa8.76□□□□□ -1.01
snR30snR30 MAK21Q12176 1025 aaKnown RBP8.75□□□□□ -1.01
snR30snR30 GRX6Q12438 231 aa8.75□□□□□ -1.01
snR30snR30 SAC3P46674 1301 aa8.75□□□□□ -1.01
snR30snR30 DAL5P15365 543 aa8.74□□□□□ -1.01
snR30snR30 BOI2P39969 1040 aa8.74□□□□□ -1.01
snR30snR30 YIL092WP40497 633 aa8.74□□□□□ -1.01
snR30snR30 SET4P42948 560 aa8.74□□□□□ -1.01
snR30snR30 HXT10P43581 546 aa8.74□□□□□ -1.01
snR30snR30 FPK1P53739 893 aa8.74□□□□□ -1.01
snR30snR30 NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.74□□□□□ -1.01not detected
snR30snR30 RET1P22276 1149 aaKnown RBP8.73□□□□□ -1.01
snR30snR30 YKU70P32807 602 aa8.73□□□□□ -1.01
snR30snR30 SHC1P39000 512 aa8.73□□□□□ -1.01
snR30snR30 NOP8Q08287 484 aaPredicted RBP8.73□□□□□ -1.01
snR30snR30 PSH1Q12161 406 aa8.73□□□□□ -1.01
snR30snR30 SLI15P38283 698 aa8.72□□□□□ -1.01
snR30snR30 EPS1P40557 701 aa8.72□□□□□ -1.01
snR30snR30 ATG20Q07528 640 aa8.72□□□□□ -1.01
snR30snR30 DPH6Q12429 685 aa8.72□□□□□ -1.01
snR30snR30 RPS19AP07280 144 aaKnown RBP8.71□□□□□ -1.02
snR30snR30 RPS19BP07281 144 aaPredicted RBP8.71□□□□□ -1.02
snR30snR30 UBP12P39538 1254 aa8.71□□□□□ -1.02
snR30snR30 FUN12P39730 1002 aaKnown RBP8.71□□□□□ -1.02
snR30snR30 BBC1P47068 1157 aa8.71□□□□□ -1.02
snR30snR30 YRB30P53107 440 aaPredicted RBP8.71□□□□□ -1.02
snR30snR30 FIG2P25653 1609 aa8.7□□□□□ -1.02
snR30snR30 TRP5P00931 707 aaKnown RBP8.7□□□□□ -1.02
snR30snR30 SPL2P38839 148 aa8.7□□□□□ -1.02
snR30snR30 MTC5Q03897 1148 aa8.7□□□□□ -1.02
snR30snR30 HKR1P41809 1802 aa8.69□□□□□ -1.02
snR30snR30 THS1P04801 734 aaKnown RBP8.69□□□□□ -1.02
snR30snR30 KRE2P27809 442 aa8.69□□□□□ -1.02
snR30snR30 NGR1P32831 672 aaKnown RBP8.69□□□□□ -1.02
snR30snR30 ICP55P40051 511 aa8.69□□□□□ -1.02
snR30snR30 TGL3P40308 642 aa8.69□□□□□ -1.02
snR30snR30 RPT4P53549 437 aaKnown RBP8.69□□□□□ -1.02
snR30snR30 PUS5Q06244 254 aa8.69□□□□□ -1.02
snR30snR30 THI3Q07471 609 aa8.69□□□□□ -1.02
snR30snR30 GAP1P19145 602 aaPredicted RBP8.68□□□□□ -1.02
snR30snR30 SSA4P22202 642 aaKnown RBP8.68□□□□□ -1.02
snR30snR30 MGM1P32266 881 aa8.68□□□□□ -1.02
snR30snR30 ILV3P39522 585 aaKnown RBP8.68□□□□□ -1.02
snR30snR30 DPL1Q05567 589 aa8.68□□□□□ -1.02
snR30snR30 RPS9BP05755 195 aaKnown RBP8.67□□□□□ -1.02
snR30snR30 YLR278CQ05854 1341 aa8.67□□□□□ -1.02
snR30snR30 GAS5Q08193 484 aa8.67□□□□□ -1.02
snR30snR30 SLA1P32790 1244 aa8.66□□□□□ -1.02
snR30snR30 SSP1P38871 571 aa8.66□□□□□ -1.02
snR30snR30 SPO1P53541 631 aa8.66□□□□□ -1.02
snR30snR30 FLO11P08640 1367 aa8.65□□□□□ -1.02
snR30snR30 AI2P03876 854 aa8.65□□□□□ -1.02
snR30snR30 RAD2P07276 1031 aa8.65□□□□□ -1.02
snR30snR30 ARP8Q12386 881 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
Retrieved 100 of 5,963 RNA–protein pairs in 213.3 ms