RNA–Protein interactions for RNA: YPR060C

ARO7, Transcript of Chorismate mutase, yeast

Gene ARO7, Length 771 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ARO7	YPR060C	UBX7	P38349	436 aa		11.59	□□□□□ -0.55
ARO7	YPR060C	ROM1	P53046	1155 aa		11.59	□□□□□ -0.55
ARO7	YPR060C	OPT2	Q06593	877 aa		11.59	□□□□□ -0.55
ARO7	YPR060C	SUM1	P46676	1062 aa		11.58	□□□□□ -0.56
ARO7	YPR060C	YDR444W	Q04093	687 aa		11.57	□□□□□ -0.56
ARO7	YPR060C	LCB5	Q06147	687 aa	Known RBP	11.56	□□□□□ -0.56
ARO7	YPR060C	CYT1	P07143	309 aa		11.55	□□□□□ -0.56
ARO7	YPR060C	TCB1	Q12466	1186 aa		11.55	□□□□□ -0.56
ARO7	YPR060C	UBP2	Q01476	1272 aa		11.54	□□□□□ -0.56
ARO7	YPR060C	SSN3	P39073	555 aa		11.53	□□□□□ -0.56
ARO7	YPR060C	VTC4	P47075	721 aa		11.52	□□□□□ -0.57
ARO7	YPR060C	SSA1	P10591	642 aa	Known RBP	11.51	□□□□□ -0.57
ARO7	YPR060C	GLY1	P37303	387 aa	Known RBP	11.51	□□□□□ -0.57
ARO7	YPR060C	ALA1	P40825	983 aa	Known RBP	11.51	□□□□□ -0.57
ARO7	YPR060C	MSN5	P52918	1224 aa		11.51	□□□□□ -0.57
ARO7	YPR060C	YPQ2	Q06328	317 aa		11.51	□□□□□ -0.57
ARO7	YPR060C	VAN1	P23642	535 aa		11.5	□□□□□ -0.57
ARO7	YPR060C	UBP1	P25037	809 aa		11.5	□□□□□ -0.57
ARO7	YPR060C	DAL1	P32375	460 aa		11.5	□□□□□ -0.57
ARO7	YPR060C	SCW11	P53189	542 aa		11.48	□□□□□ -0.57
ARO7	YPR060C	MCM1	P11746	286 aa		11.46	□□□□□ -0.57
ARO7	YPR060C	GAR1	P28007	205 aa	Known RBP	11.46	□□□□□ -0.57
ARO7	YPR060C	TY1A-BL	Q12266	440 aa		11.46	□□□□□ -0.57
ARO7	YPR060C	TRS33	Q99394	268 aa		11.46	□□□□□ -0.57
ARO7	YPR060C	RPL34A	P87262	121 aa	Predicted RBP	11.45	□□□□□ -0.58
ARO7	YPR060C	PUF6	Q04373	656 aa	Known RBP	11.45	□□□□□ -0.58
ARO7	YPR060C	AHP1	P38013	176 aa	Known RBP	11.44	□□□□□ -0.58
ARO7	YPR060C	NGR1	P32831	672 aa	Known RBP	11.43	□□□□□ -0.58
ARO7	YPR060C	JJJ2	P46997	583 aa		11.43	□□□□□ -0.58
ARO7	YPR060C	SLA1	P32790	1244 aa		11.42	□□□□□ -0.58
ARO7	YPR060C	OSH7	P38755	437 aa		11.41	□□□□□ -0.58
ARO7	YPR060C	CWH41	P53008	833 aa		11.41	□□□□□ -0.58
ARO7	YPR060C	TY1A-DR3	Q12441	440 aa		11.41	□□□□□ -0.58
ARO7	YPR060C	GEF1	P37020	779 aa		11.39	□□□□□ -0.59
ARO7	YPR060C	CWC15	Q03772	175 aa	Known RBP	11.39	□□□□□ -0.59
ARO7	YPR060C	CDC19	P00549	500 aa	Known RBP	11.38	□□□□□ -0.59
ARO7	YPR060C	PUN1	Q06991	263 aa		11.38	□□□□□ -0.59
ARO7	YPR060C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	11.37	□□□□□ -0.59	not detected
ARO7	YPR060C	IRE1	P32361	1115 aa		11.37	□□□□□ -0.59
ARO7	YPR060C	SUV3	P32580	737 aa		11.37	□□□□□ -0.59
ARO7	YPR060C	SHM1	P37292	490 aa	Predicted RBP	11.37	□□□□□ -0.59
ARO7	YPR060C	ACO2	P39533	789 aa		11.36	□□□□□ -0.59
ARO7	YPR060C	UBP15	P50101	1230 aa		11.35	□□□□□ -0.59
ARO7	YPR060C	SRS2	P12954	1174 aa		11.34	□□□□□ -0.59
ARO7	YPR060C	YNL165W	P53891	406 aa		11.34	□□□□□ -0.59
ARO7	YPR060C	ALD4	P46367	519 aa	Known RBP	11.33	□□□□□ -0.6
ARO7	YPR060C	CAF120	P53836	1060 aa		11.33	□□□□□ -0.6
ARO7	YPR060C	Q0182	Q9ZZW1	134 aa		11.33	□□□□□ -0.6
ARO7	YPR060C	RPS31	P05759	152 aa	Known RBP	11.32	□□□□□ -0.6
ARO7	YPR060C	SCD5	P34758	872 aa		11.32	□□□□□ -0.6
ARO7	YPR060C	TPS3	P38426	1054 aa	Known RBP	11.32	□□□□□ -0.6
ARO7	YPR060C	HXT5	P38695	592 aa		11.32	□□□□□ -0.6
ARO7	YPR060C	ROG3	P43602	733 aa		11.31	□□□□□ -0.6
ARO7	YPR060C	MLF3	P32047	452 aa		11.3	□□□□□ -0.6
ARO7	YPR060C	YIR007W	P40566	764 aa		11.3	□□□□□ -0.6
ARO7	YPR060C	NAM8	Q00539	523 aa	Known RBP	11.3	□□□□□ -0.6
ARO7	YPR060C	PNP1	Q05788	311 aa		11.3	□□□□□ -0.6
ARO7	YPR060C	PDC6	P26263	563 aa	Known RBP	11.29	□□□□□ -0.6
ARO7	YPR060C	YTA6	P40328	754 aa		11.29	□□□□□ -0.6
ARO7	YPR060C	TY1A-MR1	Q04215	440 aa		11.29	□□□□□ -0.6
ARO7	YPR060C	CAB1	Q04430	367 aa		11.29	□□□□□ -0.6
ARO7	YPR060C	YDL176W	Q12027	708 aa		11.29	□□□□□ -0.6
ARO7	YPR060C	PSH1	Q12161	406 aa		11.29	□□□□□ -0.6
ARO7	YPR060C	RGA1	P39083	1007 aa		11.27	□□□□□ -0.61
ARO7	YPR060C	FOX2	Q02207	900 aa	Known RBP	11.27	□□□□□ -0.61
ARO7	YPR060C	UTP4	Q06679	776 aa	Known RBP	11.27	□□□□□ -0.61
ARO7	YPR060C	YBR197C	P38306	217 aa		11.26	□□□□□ -0.61
ARO7	YPR060C	CDC3	P32457	520 aa	Known RBP	11.25	□□□□□ -0.61
ARO7	YPR060C	CCP1	P00431	361 aa		11.21	□□□□□ -0.61
ARO7	YPR060C	LEU1	P07264	779 aa	Known RBP	11.21	□□□□□ -0.61
ARO7	YPR060C	ISC10	P32645	267 aa		11.21	□□□□□ -0.61
ARO7	YPR060C	RRN6	P32786	894 aa		11.21	□□□□□ -0.61
ARO7	YPR060C	ALD2	P47771	506 aa		11.2	□□□□□ -0.62
ARO7	YPR060C	FUR4	P05316	633 aa	Known RBP	11.19	□□□□□ -0.62
ARO7	YPR060C	MRPL33	P20084	86 aa		11.19	□□□□□ -0.62
ARO7	YPR060C	CUZ1	P53899	274 aa		11.19	□□□□□ -0.62
ARO7	YPR060C	KAR5	Q04746	504 aa		11.18	□□□□□ -0.62
ARO7	YPR060C	DIT1	P21623	536 aa		11.17	□□□□□ -0.62
ARO7	YPR060C	BOL3	P39724	118 aa		11.17	□□□□□ -0.62
ARO7	YPR060C	MTO1	P53070	669 aa		11.17	□□□□□ -0.62
ARO7	YPR060C	MRPL16	P38064	232 aa		11.16	□□□□□ -0.62
ARO7	YPR060C	YMR265C	Q03508	461 aa	Known RBP	11.16	□□□□□ -0.62
ARO7	YPR060C	KAP122	P32767	1081 aa		11.15	□□□□□ -0.62
ARO7	YPR060C	STB3	Q12427	513 aa		11.15	□□□□□ -0.62
ARO7	YPR060C	VMA3	P25515	160 aa		11.14	□□□□□ -0.63
ARO7	YPR060C	QDR2	P40474	542 aa		11.14	□□□□□ -0.63
ARO7	YPR060C	RGP1	P16664	663 aa		11.13	□□□□□ -0.63
ARO7	YPR060C	YPL062W	Q02781	134 aa		11.13	□□□□□ -0.63
ARO7	YPR060C	LSO1	Q3E827	93 aa		11.13	□□□□□ -0.63
ARO7	YPR060C	BOI1	P38041	980 aa	Known RBP	11.11	□□□□□ -0.63
ARO7	YPR060C	KRE33	P53914	1056 aa	Known RBP	11.11	□□□□□ -0.63
ARO7	YPR060C	HAT1	Q12341	374 aa		11.11	□□□□□ -0.63
ARO7	YPR060C	DYS1	P38791	387 aa		11.1	□□□□□ -0.63
ARO7	YPR060C	CEM1	P39525	442 aa		11.1	□□□□□ -0.63
ARO7	YPR060C	SPR3	P41901	512 aa		11.1	□□□□□ -0.63
ARO7	YPR060C	RPC31	P17890	251 aa		11.08	□□□□□ -0.64
ARO7	YPR060C	LDH1	P38139	375 aa		11.08	□□□□□ -0.64
ARO7	YPR060C	RPP1A	P05318	106 aa	Predicted RBP	11.07	□□□□□ -0.64
ARO7	YPR060C	ADE12	P80210	433 aa	Known RBP	11.07	□□□□□ -0.64
ARO7	YPR060C	APC11	Q12157	165 aa		11.07	□□□□□ -0.64

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms