RNA–Protein interactions for RNA: YPR033C

HTS1, Transcript of Cytoplasmic and mitochondrial histidine tRNA synthetase, yeast

Gene HTS1, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HTS1	YPR033C	ATG20	Q07528	640 aa		10.33	□□□□□ -0.76
HTS1	YPR033C	FRD1	P32614	470 aa	Known RBP	10.33	□□□□□ -0.76
HTS1	YPR033C	DNM1	P54861	757 aa		10.33	□□□□□ -0.76
HTS1	YPR033C	UBP16	Q02863	499 aa		10.33	□□□□□ -0.76
HTS1	YPR033C	YLR271W	Q06152	274 aa		10.33	□□□□□ -0.76
HTS1	YPR033C	THS1	P04801	734 aa	Known RBP	10.31	□□□□□ -0.76
HTS1	YPR033C	RET1	P22276	1149 aa	Known RBP	10.31	□□□□□ -0.76
HTS1	YPR033C	TPD3	P31383	635 aa		10.31	□□□□□ -0.76
HTS1	YPR033C	PUS5	Q06244	254 aa		10.31	□□□□□ -0.76
HTS1	YPR033C	HEF3	P53978	1044 aa	Known RBP	10.29	□□□□□ -0.76
HTS1	YPR033C	RTG2	P32608	588 aa	Known RBP	10.28	□□□□□ -0.76
HTS1	YPR033C	CST6	P40535	587 aa		10.28	□□□□□ -0.76
HTS1	YPR033C	SRT1	Q03175	343 aa		10.28	□□□□□ -0.76
HTS1	YPR033C	DIP2	Q12220	943 aa	Predicted RBP	10.27	□□□□□ -0.77
HTS1	YPR033C	SWI1	P09547	1314 aa		10.27	□□□□□ -0.77
HTS1	YPR033C	NUP133	P36161	1157 aa		10.26	□□□□□ -0.77
HTS1	YPR033C	MRP7	P12687	371 aa		10.25	□□□□□ -0.77
HTS1	YPR033C	MSM1	P22438	575 aa		10.25	□□□□□ -0.77
HTS1	YPR033C	FCP1	Q03254	732 aa		10.25	□□□□□ -0.77
HTS1	YPR033C	FAS2	P19097	1887 aa	Known RBP	10.25	□□□□□ -0.77
HTS1	YPR033C	DPL1	Q05567	589 aa		10.25	□□□□□ -0.77
HTS1	YPR033C	YLR278C	Q05854	1341 aa		10.25	□□□□□ -0.77
HTS1	YPR033C	TIF4632	P39936	914 aa	Known RBP	10.24	□□□□□ -0.77
HTS1	YPR033C	YDR306C	Q06640	478 aa		10.24	□□□□□ -0.77
HTS1	YPR033C	YJR008W	P47085	338 aa		10.23	□□□□□ -0.77
HTS1	YPR033C	DPH6	Q12429	685 aa		10.23	□□□□□ -0.77
HTS1	YPR033C	HKR1	P41809	1802 aa		10.22	□□□□□ -0.77
HTS1	YPR033C	TIM50	Q02776	476 aa		10.22	□□□□□ -0.77
HTS1	YPR033C	UBX2	Q04228	584 aa		10.22	□□□□□ -0.77
HTS1	YPR033C	RPP0	P05317	312 aa	Known RBP	10.21	□□□□□ -0.78
HTS1	YPR033C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	10.21	□□□□□ -0.78	not detected
HTS1	YPR033C	FET4	P40988	552 aa		10.21	□□□□□ -0.78
HTS1	YPR033C	AIM7	Q12156	149 aa		10.21	□□□□□ -0.78
HTS1	YPR033C	VHR2	P40041	505 aa		10.2	□□□□□ -0.78
HTS1	YPR033C	NOP8	Q08287	484 aa	Predicted RBP	10.2	□□□□□ -0.78
HTS1	YPR033C	SAC3	P46674	1301 aa		10.19	□□□□□ -0.78
HTS1	YPR033C	GLC3	P32775	704 aa		10.19	□□□□□ -0.78
HTS1	YPR033C	SET1	P38827	1080 aa	Known RBP	10.19	□□□□□ -0.78
HTS1	YPR033C	ITC1	P53125	1264 aa		10.19	□□□□□ -0.78
HTS1	YPR033C	PSH1	Q12161	406 aa		10.19	□□□□□ -0.78
HTS1	YPR033C	FIG2	P25653	1609 aa		10.19	□□□□□ -0.78
HTS1	YPR033C	KRE2	P27809	442 aa		10.18	□□□□□ -0.78
HTS1	YPR033C	ICP55	P40051	511 aa		10.18	□□□□□ -0.78
HTS1	YPR033C	TRM44	Q02648	567 aa	Known RBP	10.18	□□□□□ -0.78
HTS1	YPR033C	GAP1	P19145	602 aa	Predicted RBP	10.18	□□□□□ -0.78
HTS1	YPR033C	SUI2	P20459	304 aa	Known RBP	10.18	□□□□□ -0.78
HTS1	YPR033C	SET4	P42948	560 aa		10.18	□□□□□ -0.78
HTS1	YPR033C	TRP5	P00931	707 aa	Known RBP	10.17	□□□□□ -0.78
HTS1	YPR033C	SUP35	P05453	685 aa	Known RBP	10.17	□□□□□ -0.78
HTS1	YPR033C	VPS27	P40343	622 aa	Known RBP	10.17	□□□□□ -0.78
HTS1	YPR033C	RRG1	Q12167	365 aa	Predicted RBP	10.17	□□□□□ -0.78
HTS1	YPR033C	CRF1	Q04930	467 aa		10.16	□□□□□ -0.78
HTS1	YPR033C	AFG2	P32794	780 aa		10.15	□□□□□ -0.78
HTS1	YPR033C	NGR1	P32831	672 aa	Known RBP	10.15	□□□□□ -0.78
HTS1	YPR033C	YGR122W	P53272	402 aa		10.15	□□□□□ -0.78
HTS1	YPR033C	RPT4	P53549	437 aa	Known RBP	10.15	□□□□□ -0.78
HTS1	YPR033C	MTC5	Q03897	1148 aa		10.15	□□□□□ -0.78
HTS1	YPR033C	THI3	Q07471	609 aa		10.15	□□□□□ -0.78
HTS1	YPR033C	MAK21	Q12176	1025 aa	Known RBP	10.15	□□□□□ -0.78
HTS1	YPR033C	SWC3	P31376	625 aa		10.14	□□□□□ -0.79
HTS1	YPR033C	MGM1	P32266	881 aa		10.14	□□□□□ -0.79
HTS1	YPR033C	EMP47	P43555	445 aa		10.14	□□□□□ -0.79
HTS1	YPR033C	VPS4	P52917	437 aa		10.14	□□□□□ -0.79
HTS1	YPR033C	SEN54	Q02825	467 aa	Predicted RBP	10.14	□□□□□ -0.79
HTS1	YPR033C	RAD24	P32641	659 aa		10.13	□□□□□ -0.79
HTS1	YPR033C	YGR117C	P53270	476 aa		10.13	□□□□□ -0.79
HTS1	YPR033C	CDC45	Q08032	650 aa		10.13	□□□□□ -0.79
HTS1	YPR033C	GAS5	Q08193	484 aa		10.13	□□□□□ -0.79
HTS1	YPR033C	SPL2	P38839	148 aa		10.12	□□□□□ -0.79
HTS1	YPR033C	UBP12	P39538	1254 aa		10.12	□□□□□ -0.79
HTS1	YPR033C	PEA2	P40091	420 aa		10.12	□□□□□ -0.79
HTS1	YPR033C	YPP1	P46951	817 aa		10.12	□□□□□ -0.79
HTS1	YPR033C	SRC1	Q03707	834 aa		10.12	□□□□□ -0.79
HTS1	YPR033C	SNU66	Q12420	587 aa	Predicted RBP	10.12	□□□□□ -0.79
HTS1	YPR033C	TOM1	Q03280	3268 aa		10.12	□□□□□ -0.79
HTS1	YPR033C	HPR1	P17629	752 aa	Known RBP	10.11	□□□□□ -0.79
HTS1	YPR033C	YIL089W	P40500	205 aa		10.11	□□□□□ -0.79
HTS1	YPR033C	GSM1	P42950	618 aa		10.11	□□□□□ -0.79
HTS1	YPR033C	STV1	P37296	890 aa		10.11	□□□□□ -0.79
HTS1	YPR033C	ETP1	P38748	585 aa	Known RBP	10.1	□□□□□ -0.79
HTS1	YPR033C	CWC15	Q03772	175 aa	Known RBP	10.1	□□□□□ -0.79
HTS1	YPR033C	PRP42	Q03776	544 aa	Known RBP	10.1	□□□□□ -0.79
HTS1	YPR033C	BOI2	P39969	1040 aa		10.09	□□□□□ -0.79
HTS1	YPR033C	CSI1	Q04368	295 aa		10.08	□□□□□ -0.8
HTS1	YPR033C	NUG1	P40010	520 aa	Known RBP	10.07	□□□□□ -0.8
HTS1	YPR033C	DUS1	P53759	423 aa	Known RBP	10.07	□□□□□ -0.8
HTS1	YPR033C	IRC4	Q03036	179 aa		10.07	□□□□□ -0.8
HTS1	YPR033C	JJJ2	P46997	583 aa		10.07	□□□□□ -0.8
HTS1	YPR033C	PSF3	Q12146	194 aa		10.07	□□□□□ -0.8
HTS1	YPR033C	HXT10	P43581	546 aa		10.06	□□□□□ -0.8
HTS1	YPR033C	YRB30	P53107	440 aa	Predicted RBP	10.06	□□□□□ -0.8
HTS1	YPR033C	TYW1	Q08960	810 aa	Known RBP	10.06	□□□□□ -0.8
HTS1	YPR033C	FLO11	P08640	1367 aa		10.05	□□□□□ -0.8
HTS1	YPR033C	RPS19A	P07280	144 aa	Known RBP	10.05	□□□□□ -0.8
HTS1	YPR033C	RPS19B	P07281	144 aa	Predicted RBP	10.05	□□□□□ -0.8
HTS1	YPR033C	RVB2	Q12464	471 aa	Known RBP	10.05	□□□□□ -0.8
HTS1	YPR033C	ARG82	P07250	355 aa		10.04	□□□□□ -0.8
HTS1	YPR033C	LCB1	P25045	558 aa	Known RBP	10.04	□□□□□ -0.8
HTS1	YPR033C	TOS4	Q06266	489 aa		10.04	□□□□□ -0.8
HTS1	YPR033C	ACK1	Q07622	623 aa	Predicted RBP	10.04	□□□□□ -0.8

Retrieved 100 of 5,963 RNA–protein pairs in 136.1 ms