RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
LCL1	YPL056C	VPS24	P36095	224 aa	Known RBP	3.14	□□□□□ -1.91
LCL1	YPL056C	TYS1	P36421	394 aa	Known RBP	3.14	□□□□□ -1.91
LCL1	YPL056C	VPS72	Q03388	795 aa		3.14	□□□□□ -1.91
LCL1	YPL056C	RRP15	Q06511	250 aa	Predicted RBP	3.14	□□□□□ -1.91
LCL1	YPL056C	TRK2	P28584	889 aa		3.13	□□□□□ -1.91
LCL1	YPL056C	ARL1	P38116	183 aa	Known RBP	3.13	□□□□□ -1.91
LCL1	YPL056C	KIP3	P53086	805 aa	Known RBP	3.13	□□□□□ -1.91
LCL1	YPL056C	LCB5	Q06147	687 aa	Known RBP	3.13	□□□□□ -1.91
LCL1	YPL056C	APL5	Q08951	932 aa	Known RBP	3.13	□□□□□ -1.91
LCL1	YPL056C	LSP1	Q12230	341 aa	Known RBP	3.13	□□□□□ -1.91
LCL1	YPL056C	HIF1	Q12373	385 aa		3.13	□□□□□ -1.91
LCL1	YPL056C	NOP14	Q99207	810 aa	Known RBP	3.13	□□□□□ -1.91
LCL1	YPL056C	YOL087C	Q99247	1116 aa		3.13	□□□□□ -1.91
LCL1	YPL056C	RAD2	P07276	1031 aa		3.12	□□□□□ -1.91
LCL1	YPL056C	TCD1	P38756	429 aa		3.12	□□□□□ -1.91
LCL1	YPL056C	TPM2	P40414	161 aa		3.12	□□□□□ -1.91
LCL1	YPL056C	VPS60	Q03390	229 aa		3.12	□□□□□ -1.91
LCL1	YPL056C	ERV41	Q04651	352 aa		3.12	□□□□□ -1.91
LCL1	YPL056C	YAH1	Q12184	172 aa	Known RBP	3.12	□□□□□ -1.91
LCL1	YPL056C	NHA1	Q99271	985 aa		3.12	□□□□□ -1.91
LCL1	YPL056C	RAD9	P14737	1309 aa		3.12	□□□□□ -1.91
LCL1	YPL056C	TOP1	P04786	769 aa		3.11	□□□□□ -1.91
LCL1	YPL056C	CLB1	P24868	471 aa		3.11	□□□□□ -1.91
LCL1	YPL056C	GLN1	P32288	370 aa	Known RBP	3.11	□□□□□ -1.91
LCL1	YPL056C	SPT16	P32558	1035 aa	Known RBP	3.11	□□□□□ -1.91
LCL1	YPL056C	RRP14	P36080	434 aa	Known RBP	3.11	□□□□□ -1.91
LCL1	YPL056C	RSC8	P43609	557 aa	Known RBP	3.11	□□□□□ -1.91
LCL1	YPL056C	ALD3	P54114	506 aa		3.11	□□□□□ -1.91
LCL1	YPL056C	RNT1	Q02555	471 aa		3.11	□□□□□ -1.91
LCL1	YPL056C	BUD21	Q08492	214 aa	Predicted RBP	3.11	□□□□□ -1.91
LCL1	YPL056C	YVC1	Q12324	675 aa		3.11	□□□□□ -1.91
LCL1	YPL056C	SNF2	P22082	1703 aa		3.1	□□□□□ -1.91
LCL1	YPL056C	BCK1	Q01389	1478 aa		3.1	□□□□□ -1.91
LCL1	YPL056C	DEP1	P31385	405 aa		3.1	□□□□□ -1.91
LCL1	YPL056C	PEA2	P40091	420 aa		3.1	□□□□□ -1.91
LCL1	YPL056C	TEA1	P47988	759 aa		3.1	□□□□□ -1.91
LCL1	YPL056C	RSC1	P53236	928 aa		3.1	□□□□□ -1.91
LCL1	YPL056C	PAP2	P53632	584 aa	Known RBP	3.1	□□□□□ -1.91
LCL1	YPL056C	YNL050C	P53952	270 aa		3.1	□□□□□ -1.91
LCL1	YPL056C	HOS3	Q02959	697 aa	Known RBP	3.1	□□□□□ -1.91
LCL1	YPL056C	ORM2	Q06144	216 aa		3.1	□□□□□ -1.91
LCL1	YPL056C	CDC45	Q08032	650 aa		3.1	□□□□□ -1.91
LCL1	YPL056C	MPC54	Q08550	464 aa		3.1	□□□□□ -1.91
LCL1	YPL056C	NUP192	P47054	1683 aa		3.1	□□□□□ -1.91
LCL1	YPL056C	YRF1-2	P40105	1681 aa		3.09	□□□□□ -1.91
LCL1	YPL056C	RPP0	P05317	312 aa	Known RBP	3.09	□□□□□ -1.91
LCL1	YPL056C	RAD3	P06839	778 aa		3.09	□□□□□ -1.91
LCL1	YPL056C	RPC82	P32349	654 aa		3.09	□□□□□ -1.91
LCL1	YPL056C	SWH1	P35845	1188 aa		3.09	□□□□□ -1.91
LCL1	YPL056C	VPS27	P40343	622 aa	Known RBP	3.09	□□□□□ -1.91
LCL1	YPL056C	VID30	P53076	958 aa		3.09	□□□□□ -1.91
LCL1	YPL056C	PXR1	P53335	271 aa	Predicted RBP	3.09	□□□□□ -1.91
LCL1	YPL056C	VPS30	Q02948	557 aa		3.09	□□□□□ -1.91
LCL1	YPL056C	TY1B-A	O13527	1196 aa	Known RBP	3.08	□□□□□ -1.92
LCL1	YPL056C	SUP35	P05453	685 aa	Known RBP	3.08	□□□□□ -1.92
LCL1	YPL056C	SSA1	P10591	642 aa	Known RBP	3.08	□□□□□ -1.92
LCL1	YPL056C	SSA2	P10592	639 aa	Known RBP	3.08	□□□□□ -1.92
LCL1	YPL056C	CDC11	P32458	415 aa		3.08	□□□□□ -1.92
LCL1	YPL056C	TOA1	P32773	286 aa		3.08	□□□□□ -1.92
LCL1	YPL056C	NMA111	P53920	997 aa		3.08	□□□□□ -1.92
LCL1	YPL056C	APP1	P53933	587 aa		3.08	□□□□□ -1.92
LCL1	YPL056C	MRS2	Q01926	470 aa		3.08	□□□□□ -1.92
LCL1	YPL056C	LCD1	Q04377	747 aa		3.08	□□□□□ -1.92
LCL1	YPL056C	COG8	Q04632	607 aa		3.08	□□□□□ -1.92
LCL1	YPL056C	SML1	Q04964	104 aa		3.08	□□□□□ -1.92
LCL1	YPL056C	ESC2	Q06340	456 aa		3.08	□□□□□ -1.92
LCL1	YPL056C	MDM38	Q08179	573 aa		3.08	□□□□□ -1.92
LCL1	YPL056C	NFI1	Q12216	726 aa		3.08	□□□□□ -1.92
LCL1	YPL056C	YLL054C	Q12244	843 aa		3.08	□□□□□ -1.92
LCL1	YPL056C	RVB2	Q12464	471 aa	Known RBP	3.08	□□□□□ -1.92
LCL1	YPL056C	SEC39	Q12745	709 aa		3.08	□□□□□ -1.92
LCL1	YPL056C	KRE5	P22023	1365 aa		3.08	□□□□□ -1.92
LCL1	YPL056C	PDR11	P40550	1411 aa		3.08	□□□□□ -1.92
LCL1	YPL056C	MCM1	P11746	286 aa		3.07	□□□□□ -1.92
LCL1	YPL056C	KAR3	P17119	729 aa		3.07	□□□□□ -1.92
LCL1	YPL056C	SPT5	P27692	1063 aa	Known RBP	3.07	□□□□□ -1.92
LCL1	YPL056C	YMR124W	P39523	943 aa	Known RBP	3.07	□□□□□ -1.92
LCL1	YPL056C	LEM3	P42838	414 aa		3.07	□□□□□ -1.92
LCL1	YPL056C	YGL140C	P53120	1219 aa		3.07	□□□□□ -1.92
LCL1	YPL056C	ITC1	P53125	1264 aa		3.07	□□□□□ -1.92
LCL1	YPL056C	YMR102C	Q03177	834 aa		3.07	□□□□□ -1.92
LCL1	YPL056C	UTP13	Q05946	817 aa	Known RBP	3.07	□□□□□ -1.92
LCL1	YPL056C	NDL1	Q06568	189 aa		3.07	□□□□□ -1.92
LCL1	YPL056C	PUS1	Q12211	544 aa	Known RBP	3.07	□□□□□ -1.92
LCL1	YPL056C	ROM2	P51862	1356 aa	Known RBP	3.07	□□□□□ -1.92
LCL1	YPL056C	TY3B-I	Q7LHG5	1498 aa	Known RBP	3.07	□□□□□ -1.92
LCL1	YPL056C	CLN1	P20437	546 aa		3.06	□□□□□ -1.92
LCL1	YPL056C	MSH1	P25846	959 aa		3.06	□□□□□ -1.92
LCL1	YPL056C	MCM2	P29469	868 aa		3.06	□□□□□ -1.92
LCL1	YPL056C	RAD16	P31244	790 aa		3.06	□□□□□ -1.92
LCL1	YPL056C	PSE1	P32337	1089 aa	Known RBP	3.06	□□□□□ -1.92
LCL1	YPL056C	PUP2	P32379	260 aa		3.06	□□□□□ -1.92
LCL1	YPL056C	ZUO1	P32527	433 aa	Known RBP	3.06	□□□□□ -1.92
LCL1	YPL056C	RKM3	P38222	552 aa		3.06	□□□□□ -1.92
LCL1	YPL056C	IAH1	P41734	238 aa		3.06	□□□□□ -1.92
LCL1	YPL056C	STU2	P46675	888 aa		3.06	□□□□□ -1.92
LCL1	YPL056C	BDP1	P46678	594 aa		3.06	□□□□□ -1.92
LCL1	YPL056C	MPP10	P47083	593 aa	Known RBP	3.06	□□□□□ -1.92
LCL1	YPL056C	YOR389W	Q08912	624 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms