RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W GTT3P39996 337 aa8.02□□□□□ -1.13
CTF19YPL018W YFR016CP43597 1233 aaKnown RBP8.02□□□□□ -1.13
CTF19YPL018W TEA1P47988 759 aa8.02□□□□□ -1.13
CTF19YPL018W LYS2P07702 1392 aa8.01□□□□□ -1.13
CTF19YPL018W CTH1P47976 325 aa8.01□□□□□ -1.13
CTF19YPL018W ALD3P54114 506 aa8.01□□□□□ -1.13
CTF19YPL018W NOP8Q08287 484 aaPredicted RBP8.01□□□□□ -1.13
CTF19YPL018W PHM7Q12252 991 aa8.01□□□□□ -1.13
CTF19YPL018W APL2P36000 726 aaPredicted RBP8□□□□□ -1.13
CTF19YPL018W TIF4632P39936 914 aaKnown RBP8□□□□□ -1.13
CTF19YPL018W YGL082WP53155 381 aa8□□□□□ -1.13
CTF19YPL018W YIL092WP40497 633 aa7.99□□□□□ -1.13
CTF19YPL018W DNM1P54861 757 aa7.99□□□□□ -1.13
CTF19YPL018W NYV1Q12255 253 aa7.99□□□□□ -1.13
CTF19YPL018W MRP7P12687 371 aa7.98□□□□□ -1.13
CTF19YPL018W TGL3P40308 642 aa7.98□□□□□ -1.13
CTF19YPL018W YPP1P46951 817 aa7.98□□□□□ -1.13
CTF19YPL018W UTP22P53254 1237 aaPredicted RBP7.98□□□□□ -1.13
CTF19YPL018W HPC2Q01448 625 aa7.98□□□□□ -1.13
CTF19YPL018W CTI6Q08923 506 aa7.98□□□□□ -1.13
CTF19YPL018W PKH1Q03407 766 aa7.97□□□□□ -1.13
CTF19YPL018W NUP133P36161 1157 aa7.96□□□□□ -1.14
CTF19YPL018W CST6P40535 587 aa7.96□□□□□ -1.14
CTF19YPL018W YGR122WP53272 402 aa7.96□□□□□ -1.14
CTF19YPL018W CSI1Q04368 295 aa7.96□□□□□ -1.14
CTF19YPL018W YPR204WQ08995 1032 aa7.96□□□□□ -1.14
CTF19YPL018W AIM44Q99299 758 aa7.96□□□□□ -1.14
CTF19YPL018W LPD1P09624 499 aaKnown RBP7.95□□□□□ -1.14
CTF19YPL018W ARG8P18544 423 aa7.95□□□□□ -1.14
CTF19YPL018W RAD24P32641 659 aa7.95□□□□□ -1.14
CTF19YPL018W FPR3P38911 411 aaKnown RBP7.95□□□□□ -1.14
CTF19YPL018W YDR306CQ06640 478 aa7.95□□□□□ -1.14
CTF19YPL018W SWC3P31376 625 aa7.94□□□□□ -1.14
CTF19YPL018W SWI1P09547 1314 aa7.94□□□□□ -1.14
CTF19YPL018W TRP5P00931 707 aaKnown RBP7.93□□□□□ -1.14
CTF19YPL018W TOS1P38288 455 aa7.93□□□□□ -1.14
CTF19YPL018W MAK11P20484 414 aaKnown RBP7.92□□□□□ -1.14
CTF19YPL018W YNG2P38806 282 aaKnown RBP7.92□□□□□ -1.14
CTF19YPL018W RAT1Q02792 1006 aaKnown RBP7.92□□□□□ -1.14
CTF19YPL018W PUF6Q04373 656 aaKnown RBP7.92□□□□□ -1.14
CTF19YPL018W RIX7Q07844 837 aaKnown RBP7.92□□□□□ -1.14
CTF19YPL018W POL32P47110 350 aa7.91□□□□□ -1.14
CTF19YPL018W RPS19AP07280 144 aaKnown RBP7.9□□□□□ -1.14
CTF19YPL018W RPS19BP07281 144 aaPredicted RBP7.9□□□□□ -1.14
CTF19YPL018W STS1P38637 319 aa7.9□□□□□ -1.14
CTF19YPL018W YJR008WP47085 338 aa7.9□□□□□ -1.14
CTF19YPL018W YMR1P47147 688 aaKnown RBP RIP-Chip data7.9□□□□□ -1.14not detected
CTF19YPL018W FCP1Q03254 732 aa7.9□□□□□ -1.14
CTF19YPL018W UBP9P39967 754 aa7.89□□□□□ -1.15
CTF19YPL018W BOI2P39969 1040 aa7.89□□□□□ -1.15
CTF19YPL018W PSH1Q12161 406 aa7.89□□□□□ -1.15
CTF19YPL018W HAT1Q12341 374 aa7.89□□□□□ -1.15
CTF19YPL018W RIM15P43565 1770 aa7.89□□□□□ -1.15
CTF19YPL018W UBP12P39538 1254 aa7.88□□□□□ -1.15
CTF19YPL018W MSN5P52918 1224 aa7.88□□□□□ -1.15
CTF19YPL018W ITC1P53125 1264 aa7.88□□□□□ -1.15
CTF19YPL018W SPO1P53541 631 aa7.88□□□□□ -1.15
CTF19YPL018W DIB1Q06819 143 aaPredicted RBP7.88□□□□□ -1.15
CTF19YPL018W SUP35P05453 685 aaKnown RBP7.87□□□□□ -1.15
CTF19YPL018W IRC3Q06683 689 aa7.87□□□□□ -1.15
CTF19YPL018W BDF2Q07442 638 aa7.87□□□□□ -1.15
CTF19YPL018W SET1P38827 1080 aaKnown RBP7.86□□□□□ -1.15
CTF19YPL018W YOR238WQ08634 303 aa7.86□□□□□ -1.15
CTF19YPL018W SSK22P25390 1331 aaPredicted RBP7.85□□□□□ -1.15
CTF19YPL018W DBP1P24784 617 aaKnown RBP7.85□□□□□ -1.15
CTF19YPL018W EAF6P47128 113 aa7.85□□□□□ -1.15
CTF19YPL018W CAF20P12962 161 aaKnown RBP7.84□□□□□ -1.15
CTF19YPL018W ILV3P39522 585 aaKnown RBP7.84□□□□□ -1.15
CTF19YPL018W YAP5P40574 245 aa7.84□□□□□ -1.15
CTF19YPL018W CWH41P53008 833 aa7.84□□□□□ -1.15
CTF19YPL018W SNU66Q12420 587 aaPredicted RBP7.84□□□□□ -1.15
CTF19YPL018W YKL222CP35995 705 aa7.83□□□□□ -1.16
CTF19YPL018W PFF1P38244 976 aa7.83□□□□□ -1.16
CTF19YPL018W RPN1P38764 993 aaKnown RBP7.83□□□□□ -1.16
CTF19YPL018W NMD2P38798 1089 aaKnown RBP7.83□□□□□ -1.16
CTF19YPL018W HXT10P43581 546 aa7.83□□□□□ -1.16
CTF19YPL018W HGH1P48362 394 aaKnown RBP7.83□□□□□ -1.16
CTF19YPL018W MTC5Q03897 1148 aa7.83□□□□□ -1.16
CTF19YPL018W CTT1P06115 562 aa7.82□□□□□ -1.16
CTF19YPL018W GCD7P32502 381 aaPredicted RBP7.82□□□□□ -1.16
CTF19YPL018W FRD1P32614 470 aaKnown RBP7.82□□□□□ -1.16
CTF19YPL018W SAS4Q04003 481 aa7.82□□□□□ -1.16
CTF19YPL018W SYF1Q04048 859 aaPredicted RBP7.82□□□□□ -1.16
CTF19YPL018W SIT4P20604 311 aa7.81□□□□□ -1.16
CTF19YPL018W COQ8P27697 501 aa7.81□□□□□ -1.16
CTF19YPL018W SMY1P32364 656 aaKnown RBP7.81□□□□□ -1.16
CTF19YPL018W ERT1P38140 529 aa7.81□□□□□ -1.16
CTF19YPL018W SSF1P38789 453 aaPredicted RBP7.81□□□□□ -1.16
CTF19YPL018W BDP1P46678 594 aa7.81□□□□□ -1.16
CTF19YPL018W NCB2Q92317 146 aa7.81□□□□□ -1.16
CTF19YPL018W MST1P07236 462 aa7.79□□□□□ -1.16
CTF19YPL018W SLA1P32790 1244 aa7.79□□□□□ -1.16
CTF19YPL018W NGR1P32831 672 aaKnown RBP7.79□□□□□ -1.16
CTF19YPL018W EDS1P38073 919 aa7.79□□□□□ -1.16
CTF19YPL018W RFC1P38630 861 aaKnown RBP7.79□□□□□ -1.16
CTF19YPL018W YER156CP40093 338 aaKnown RBP7.79□□□□□ -1.16
CTF19YPL018W UBP16Q02863 499 aa7.79□□□□□ -1.16
CTF19YPL018W ERO1Q03103 563 aa7.79□□□□□ -1.16
CTF19YPL018W YPR148CQ06523 435 aa7.79□□□□□ -1.16
CTF19YPL018W PIB1Q06651 286 aa7.79□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms