RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W ATG20Q07528 640 aa4.83□□□□□ -1.64
SRL1YOR247W MSC6Q08818 692 aaKnown RBP4.83□□□□□ -1.64
SRL1YOR247W TRS33Q99394 268 aa4.83□□□□□ -1.64
SRL1YOR247W FBP26P32604 452 aa4.82□□□□□ -1.64
SRL1YOR247W IPL1P38991 367 aa4.82□□□□□ -1.64
SRL1YOR247W ITT1Q04638 464 aa4.82□□□□□ -1.64
SRL1YOR247W ISR1Q06098 443 aaKnown RBP4.82□□□□□ -1.64
SRL1YOR247W BDS1Q08347 646 aa4.82□□□□□ -1.64
SRL1YOR247W GRS1P38088 690 aaKnown RBP4.81□□□□□ -1.64
SRL1YOR247W MET10P39692 1035 aa4.81□□□□□ -1.64
SRL1YOR247W AIM9P40053 627 aaKnown RBP4.81□□□□□ -1.64
SRL1YOR247W NUP85P46673 744 aa4.81□□□□□ -1.64
SRL1YOR247W CWH41P53008 833 aa4.81□□□□□ -1.64
SRL1YOR247W ATG1P53104 897 aa4.81□□□□□ -1.64
SRL1YOR247W CBC2Q08920 208 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64not detected
SRL1YOR247W TRL1P09880 827 aaKnown RBP4.8□□□□□ -1.64
SRL1YOR247W MIP1P15801 1254 aa4.8□□□□□ -1.64
SRL1YOR247W GBP2P25555 427 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
SRL1YOR247W TPS3P38426 1054 aaKnown RBP4.8□□□□□ -1.64
SRL1YOR247W ISU1Q03020 165 aa4.8□□□□□ -1.64
SRL1YOR247W YDR444WQ04093 687 aa4.8□□□□□ -1.64
SRL1YOR247W MET22P32179 357 aa4.79□□□□□ -1.64
SRL1YOR247W YHL050CP38721 697 aa4.79□□□□□ -1.64
SRL1YOR247W YHR219WP38900 624 aa4.79□□□□□ -1.64
SRL1YOR247W AAD14P42884 376 aa4.79□□□□□ -1.64
SRL1YOR247W ACF4P47129 309 aa4.79□□□□□ -1.64
SRL1YOR247W DFG5Q05031 458 aa4.79□□□□□ -1.64
SRL1YOR247W HDA3Q06623 655 aa4.79□□□□□ -1.64
SRL1YOR247W STE6P12866 1290 aa4.78□□□□□ -1.64
SRL1YOR247W NTH2P35172 780 aa4.78□□□□□ -1.64
SRL1YOR247W GLO3P38682 493 aaKnown RBP4.78□□□□□ -1.64
SRL1YOR247W PPX1P38698 397 aa4.78□□□□□ -1.64
SRL1YOR247W MDJ2P42834 146 aa4.78□□□□□ -1.64
SRL1YOR247W THI12P42883 340 aa4.78□□□□□ -1.64
SRL1YOR247W THI5P43534 340 aa4.78□□□□□ -1.64
SRL1YOR247W THI11P47183 340 aa4.78□□□□□ -1.64
SRL1YOR247W LSC2P53312 427 aa4.78□□□□□ -1.64
SRL1YOR247W LCB5Q06147 687 aaKnown RBP4.78□□□□□ -1.64
SRL1YOR247W THI13Q07748 340 aa4.78□□□□□ -1.64
SRL1YOR247W GAR1P28007 205 aaKnown RBP4.77□□□□□ -1.65
SRL1YOR247W PAM1P37304 830 aaKnown RBP4.77□□□□□ -1.65
SRL1YOR247W HAL5P38970 855 aaKnown RBP4.77□□□□□ -1.65
SRL1YOR247W DLD3P39976 496 aaKnown RBP4.77□□□□□ -1.65
SRL1YOR247W QDR1P40475 563 aa4.77□□□□□ -1.65
SRL1YOR247W ALD4P46367 519 aaKnown RBP4.77□□□□□ -1.65
SRL1YOR247W CYT1P07143 309 aa4.76□□□□□ -1.65
SRL1YOR247W UBP1P25037 809 aa4.76□□□□□ -1.65
SRL1YOR247W TBS1P38114 1094 aa4.76□□□□□ -1.65
SRL1YOR247W BOL3P39724 118 aa4.76□□□□□ -1.65
SRL1YOR247W POL32P47110 350 aa4.76□□□□□ -1.65
SRL1YOR247W UBP2Q01476 1272 aa4.76□□□□□ -1.65
SRL1YOR247W RPS6AP0CX37 236 aaKnown RBP4.75□□□□□ -1.65
SRL1YOR247W RPS6BP0CX38 236 aaPredicted RBP4.75□□□□□ -1.65
SRL1YOR247W UTR2P32623 467 aa4.75□□□□□ -1.65
SRL1YOR247W MGE1P38523 228 aa4.75□□□□□ -1.65
SRL1YOR247W SPR3P41901 512 aa4.75□□□□□ -1.65
SRL1YOR247W SVF1Q05515 481 aa4.75□□□□□ -1.65
SRL1YOR247W OPT2Q06593 877 aa4.75□□□□□ -1.65
SRL1YOR247W SPT2P06843 333 aaPredicted RBP4.74□□□□□ -1.65
SRL1YOR247W DAT1P13483 248 aaKnown RBP4.74□□□□□ -1.65
SRL1YOR247W NGR1P32831 672 aaKnown RBP4.74□□□□□ -1.65
SRL1YOR247W GLY1P37303 387 aaKnown RBP4.74□□□□□ -1.65
SRL1YOR247W SCW11P53189 542 aa4.74□□□□□ -1.65
SRL1YOR247W LSO1Q3E827 93 aa4.74□□□□□ -1.65
SRL1YOR247W SWI5P08153 709 aa4.73□□□□□ -1.65
SRL1YOR247W YJR098CP47139 656 aa4.73□□□□□ -1.65
SRL1YOR247W ALD2P47771 506 aa4.73□□□□□ -1.65
SRL1YOR247W NAP1P25293 417 aaKnown RBP4.72□□□□□ -1.65
SRL1YOR247W DLD1P32891 587 aa4.72□□□□□ -1.65
SRL1YOR247W NUT2Q06213 157 aa4.72□□□□□ -1.65
SRL1YOR247W SUV3P32580 737 aa4.71□□□□□ -1.66
SRL1YOR247W WTM2Q12206 467 aa4.71□□□□□ -1.66
SRL1YOR247W WHI5Q12416 295 aa4.71□□□□□ -1.66
SRL1YOR247W YBR197CP38306 217 aa4.7□□□□□ -1.66
SRL1YOR247W VTC4P47075 721 aa4.7□□□□□ -1.66
SRL1YOR247W TRS120Q04183 1289 aa4.7□□□□□ -1.66
SRL1YOR247W RRP15Q06511 250 aaPredicted RBP4.7□□□□□ -1.66
SRL1YOR247W TCB1Q12466 1186 aa4.7□□□□□ -1.66
SRL1YOR247W ATE1P16639 503 aa4.69□□□□□ -1.66
SRL1YOR247W ISC10P32645 267 aa4.69□□□□□ -1.66
SRL1YOR247W ORC1P54784 914 aaPredicted RBP4.69□□□□□ -1.66
SRL1YOR247W UFD2P54860 961 aa4.69□□□□□ -1.66
SRL1YOR247W OYE2Q03558 400 aaKnown RBP4.69□□□□□ -1.66
SRL1YOR247W TY1A-BLQ12266 440 aa4.69□□□□□ -1.66
SRL1YOR247W FRT1Q99332 602 aa4.69□□□□□ -1.66
SRL1YOR247W SEC8P32855 1065 aa4.68□□□□□ -1.66
SRL1YOR247W ACO2P39533 789 aa4.68□□□□□ -1.66
SRL1YOR247W MSN5P52918 1224 aa4.68□□□□□ -1.66
SRL1YOR247W FOX2Q02207 900 aaKnown RBP4.68□□□□□ -1.66
SRL1YOR247W MCM1P11746 286 aa4.67□□□□□ -1.66
SRL1YOR247W DAL1P32375 460 aa4.67□□□□□ -1.66
SRL1YOR247W MET4P32389 672 aa4.67□□□□□ -1.66
SRL1YOR247W GCD6P32501 712 aaKnown RBP4.67□□□□□ -1.66
SRL1YOR247W OSH7P38755 437 aa4.67□□□□□ -1.66
SRL1YOR247W YJR107WP47145 328 aa4.67□□□□□ -1.66
SRL1YOR247W YPL062WQ02781 134 aa4.67□□□□□ -1.66
SRL1YOR247W APC11Q12157 165 aa4.67□□□□□ -1.66
SRL1YOR247W SCD5P34758 872 aa4.66□□□□□ -1.66
SRL1YOR247W AHP1P38013 176 aaKnown RBP4.66□□□□□ -1.66
SRL1YOR247W BOI1P38041 980 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms