RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C BBC1P47068 1157 aa6.25□□□□□ -1.41
RAT1YOR048C THI12P42883 340 aa6.25□□□□□ -1.41
RAT1YOR048C THI5P43534 340 aa6.25□□□□□ -1.41
RAT1YOR048C THI11P47183 340 aa6.25□□□□□ -1.41
RAT1YOR048C THI13Q07748 340 aa6.25□□□□□ -1.41
RAT1YOR048C RNR2P09938 399 aaKnown RBP6.24□□□□□ -1.41
RAT1YOR048C OSW7P43611 510 aa6.24□□□□□ -1.41
RAT1YOR048C PRP43P53131 767 aaKnown RBP6.24□□□□□ -1.41
RAT1YOR048C ALO1P54783 526 aaKnown RBP6.24□□□□□ -1.41
RAT1YOR048C YOL057WQ08225 711 aa6.24□□□□□ -1.41
RAT1YOR048C TY4B-HP0C2J7 1802 aa6.24□□□□□ -1.41
RAT1YOR048C TY4B-JP47024 1803 aa6.24□□□□□ -1.41
RAT1YOR048C BDH2P39713 417 aa6.24□□□□□ -1.41
RAT1YOR048C PEX19Q07418 342 aa6.24□□□□□ -1.41
RAT1YOR048C PDR18P53756 1333 aa6.24□□□□□ -1.41
RAT1YOR048C LPD1P09624 499 aaKnown RBP6.23□□□□□ -1.41
RAT1YOR048C CDC16P09798 840 aa6.23□□□□□ -1.41
RAT1YOR048C PRP5P21372 849 aaPredicted RBP6.23□□□□□ -1.41
RAT1YOR048C KRE33P53914 1056 aaKnown RBP6.23□□□□□ -1.41
RAT1YOR048C DUR1,2P32528 1835 aaKnown RBP6.23□□□□□ -1.41
RAT1YOR048C HST1P53685 503 aa6.23□□□□□ -1.41
RAT1YOR048C SRC1Q03707 834 aa6.23□□□□□ -1.41
RAT1YOR048C NOP58Q12499 511 aaKnown RBP6.23□□□□□ -1.41
RAT1YOR048C XKS1P42826 600 aa6.23□□□□□ -1.41
RAT1YOR048C ARP5P53946 755 aa6.23□□□□□ -1.41
RAT1YOR048C GCD7P32502 381 aaPredicted RBP6.22□□□□□ -1.41
RAT1YOR048C SPT21P35209 758 aa6.22□□□□□ -1.41
RAT1YOR048C ECM21P38167 1117 aaKnown RBP6.22□□□□□ -1.41
RAT1YOR048C SGD1Q06132 899 aa6.22□□□□□ -1.41
RAT1YOR048C RPL19AP0CX82 189 aaKnown RBP6.22□□□□□ -1.41
RAT1YOR048C RPL19BP0CX83 189 aaPredicted RBP6.22□□□□□ -1.41
RAT1YOR048C PRX1P34227 261 aaKnown RBP6.22□□□□□ -1.41
RAT1YOR048C CIC1P38779 376 aaKnown RBP6.22□□□□□ -1.41
RAT1YOR048C RSM25P40496 264 aa6.22□□□□□ -1.41
RAT1YOR048C ECM16Q04217 1267 aaKnown RBP6.22□□□□□ -1.41
RAT1YOR048C CPA2P03965 1118 aaKnown RBP6.21□□□□□ -1.41
RAT1YOR048C CYC8P14922 966 aa6.21□□□□□ -1.41
RAT1YOR048C RDS1P25611 832 aa6.21□□□□□ -1.41
RAT1YOR048C MRPL10P36520 322 aa6.21□□□□□ -1.41
RAT1YOR048C NSE3Q05541 303 aa6.21□□□□□ -1.41
RAT1YOR048C TPM2P40414 161 aa6.2□□□□□ -1.42
RAT1YOR048C YDR306CQ06640 478 aa6.2□□□□□ -1.42
RAT1YOR048C INP54Q08227 384 aaKnown RBP6.2□□□□□ -1.42
RAT1YOR048C RRP43P25359 394 aaPredicted RBP6.2□□□□□ -1.42
RAT1YOR048C KCC4P25389 1037 aa6.2□□□□□ -1.42
RAT1YOR048C NOC2P39744 710 aaKnown RBP6.2□□□□□ -1.42
RAT1YOR048C AIM9P40053 627 aaKnown RBP6.2□□□□□ -1.42
RAT1YOR048C EPL1P43572 832 aa6.2□□□□□ -1.42
RAT1YOR048C SLM3Q12093 417 aa6.2□□□□□ -1.42
RAT1YOR048C NPR3P38742 1146 aa6.2□□□□□ -1.42
RAT1YOR048C TUM1Q08686 304 aaKnown RBP6.2□□□□□ -1.42
RAT1YOR048C SWI1P09547 1314 aa6.19□□□□□ -1.42
RAT1YOR048C YRF1-2P40105 1681 aa6.19□□□□□ -1.42
RAT1YOR048C IMP2'P32351 346 aa6.19□□□□□ -1.42
RAT1YOR048C AVT3P36062 692 aa6.19□□□□□ -1.42
RAT1YOR048C YER130CP39959 443 aa6.19□□□□□ -1.42
RAT1YOR048C YMR147WP40218 223 aaKnown RBP6.19□□□□□ -1.42
RAT1YOR048C YGL082WP53155 381 aa6.19□□□□□ -1.42
RAT1YOR048C ADE16P54113 591 aaKnown RBP6.19□□□□□ -1.42
RAT1YOR048C FRK1Q03002 865 aaPredicted RBP6.19□□□□□ -1.42
RAT1YOR048C SSK22P25390 1331 aaPredicted RBP6.19□□□□□ -1.42
RAT1YOR048C CLB5P30283 435 aa6.19□□□□□ -1.42
RAT1YOR048C UBP12P39538 1254 aa6.19□□□□□ -1.42
RAT1YOR048C DNM1P54861 757 aa6.19□□□□□ -1.42
RAT1YOR048C GPA1P08539 472 aa6.18□□□□□ -1.42
RAT1YOR048C ATE1P16639 503 aa6.18□□□□□ -1.42
RAT1YOR048C CCT5P40413 562 aaKnown RBP6.18□□□□□ -1.42
RAT1YOR048C PKH1Q03407 766 aa6.18□□□□□ -1.42
RAT1YOR048C MSB4Q12317 492 aa6.18□□□□□ -1.42
RAT1YOR048C KEX1P09620 729 aa6.18□□□□□ -1.42
RAT1YOR048C PBY1P38254 753 aa6.18□□□□□ -1.42
RAT1YOR048C SAP1P39955 897 aaKnown RBP6.18□□□□□ -1.42
RAT1YOR048C UTP13Q05946 817 aaKnown RBP6.18□□□□□ -1.42
RAT1YOR048C RPN7Q06103 429 aaKnown RBP6.18□□□□□ -1.42
RAT1YOR048C ESC2Q06340 456 aa6.18□□□□□ -1.42
RAT1YOR048C PRP31P49704 494 aaPredicted RBP6.17□□□□□ -1.42
RAT1YOR048C HCA4P20448 770 aaKnown RBP6.17□□□□□ -1.42
RAT1YOR048C STM1P39015 273 aaKnown RBP6.17□□□□□ -1.42
RAT1YOR048C YGL242CP53066 181 aa6.17□□□□□ -1.42
RAT1YOR048C HOS3Q02959 697 aaKnown RBP6.17□□□□□ -1.42
RAT1YOR048C SRP40P32583 406 aaPredicted RBP6.17□□□□□ -1.42
RAT1YOR048C PCH2P38126 564 aa6.17□□□□□ -1.42
RAT1YOR048C SFI1Q12369 946 aa6.17□□□□□ -1.42
RAT1YOR048C NCB2Q92317 146 aa6.17□□□□□ -1.42
RAT1YOR048C URB1P34241 1764 aaKnown RBP6.16□□□□□ -1.42
RAT1YOR048C UGA3P26370 528 aa6.16□□□□□ -1.42
RAT1YOR048C SWE1P32944 819 aa6.16□□□□□ -1.42
RAT1YOR048C RFC5P38251 354 aa6.16□□□□□ -1.42
RAT1YOR048C LYS2P07702 1392 aa6.16□□□□□ -1.42
RAT1YOR048C DCD1P06773 312 aa6.16□□□□□ -1.42
RAT1YOR048C ESF1Q06344 628 aaKnown RBP6.16□□□□□ -1.42
RAT1YOR048C MAL33P38157 468 aa6.15□□□□□ -1.42
RAT1YOR048C YNL193WP53870 558 aa6.15□□□□□ -1.42
RAT1YOR048C UBP16Q02863 499 aa6.15□□□□□ -1.42
RAT1YOR048C OSM1P21375 501 aaKnown RBP6.15□□□□□ -1.43
RAT1YOR048C KTR1P27810 393 aaKnown RBP6.15□□□□□ -1.43
RAT1YOR048C RTT107P38850 1070 aa6.15□□□□□ -1.43
RAT1YOR048C PIL1P53252 339 aaKnown RBP6.15□□□□□ -1.43
RAT1YOR048C CST6P40535 587 aa6.15□□□□□ -1.43
RAT1YOR048C CTH1P47976 325 aa6.15□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms