RNA–Protein interactions for RNA: YOL117W

RRI2, Transcript of Subunit of the COP9 signalosome (CSN) complex, yeast

Gene RRI2, Length 1,938 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRI2	YOL117W	SUM1	P46676	1062 aa		5.05	□□□□□ -1.6
RRI2	YOL117W	UBP1	P25037	809 aa		5.05	□□□□□ -1.6
RRI2	YOL117W	VTC4	P47075	721 aa		5.05	□□□□□ -1.6
RRI2	YOL117W	OPT2	Q06593	877 aa		5.05	□□□□□ -1.6
RRI2	YOL117W	DAL1	P32375	460 aa		5.04	□□□□□ -1.6
RRI2	YOL117W	LSC2	P53312	427 aa		5.04	□□□□□ -1.6
RRI2	YOL117W	SLA1	P32790	1244 aa		5.03	□□□□□ -1.6
RRI2	YOL117W	UBX7	P38349	436 aa		5.03	□□□□□ -1.6
RRI2	YOL117W	DLD3	P39976	496 aa	Known RBP	5.03	□□□□□ -1.6
RRI2	YOL117W	MSN5	P52918	1224 aa		5.03	□□□□□ -1.6
RRI2	YOL117W	LCB5	Q06147	687 aa	Known RBP	5.03	□□□□□ -1.6
RRI2	YOL117W	UTP7	P40055	554 aa	Known RBP	5.03	□□□□□ -1.6
RRI2	YOL117W	CYT1	P07143	309 aa		5.02	□□□□□ -1.61
RRI2	YOL117W	SUV3	P32580	737 aa		5.02	□□□□□ -1.61
RRI2	YOL117W	RGA1	P39083	1007 aa		5.02	□□□□□ -1.61
RRI2	YOL117W	CWC15	Q03772	175 aa	Known RBP	5.02	□□□□□ -1.61
RRI2	YOL117W	SSA1	P10591	642 aa	Known RBP	5.01	□□□□□ -1.61
RRI2	YOL117W	MCM1	P11746	286 aa		5.01	□□□□□ -1.61
RRI2	YOL117W	NGR1	P32831	672 aa	Known RBP	5.01	□□□□□ -1.61
RRI2	YOL117W	GLY1	P37303	387 aa	Known RBP	5.01	□□□□□ -1.61
RRI2	YOL117W	YDR444W	Q04093	687 aa		5.01	□□□□□ -1.61
RRI2	YOL117W	TY1A-DR3	Q12441	440 aa		5.01	□□□□□ -1.61
RRI2	YOL117W	TCB1	Q12466	1186 aa		5.01	□□□□□ -1.61
RRI2	YOL117W	PUF6	Q04373	656 aa	Known RBP	5.01	□□□□□ -1.61
RRI2	YOL117W	TY1A-BL	Q12266	440 aa		5.01	□□□□□ -1.61
RRI2	YOL117W	UBP2	Q01476	1272 aa		5	□□□□□ -1.61
RRI2	YOL117W	YLR346C	Q06139	101 aa		5	□□□□□ -1.61
RRI2	YOL117W	RPS31	P05759	152 aa	Known RBP	4.99	□□□□□ -1.61
RRI2	YOL117W	VAN1	P23642	535 aa		4.99	□□□□□ -1.61
RRI2	YOL117W	SHM1	P37292	490 aa	Predicted RBP	4.99	□□□□□ -1.61
RRI2	YOL117W	CDC19	P00549	500 aa	Known RBP	4.98	□□□□□ -1.61
RRI2	YOL117W	TPS3	P38426	1054 aa	Known RBP	4.98	□□□□□ -1.61
RRI2	YOL117W	HXT5	P38695	592 aa		4.98	□□□□□ -1.61
RRI2	YOL117W	OSH7	P38755	437 aa		4.98	□□□□□ -1.61
RRI2	YOL117W	ACO2	P39533	789 aa		4.98	□□□□□ -1.61
RRI2	YOL117W	JJJ2	P46997	583 aa		4.98	□□□□□ -1.61
RRI2	YOL117W	YNL165W	P53891	406 aa		4.98	□□□□□ -1.61
RRI2	YOL117W	GEF1	P37020	779 aa		4.97	□□□□□ -1.61
RRI2	YOL117W	SCW11	P53189	542 aa		4.97	□□□□□ -1.61
RRI2	YOL117W	YDL176W	Q12027	708 aa		4.96	□□□□□ -1.62
RRI2	YOL117W	TRS33	Q99394	268 aa		4.96	□□□□□ -1.62
RRI2	YOL117W	SRS2	P12954	1174 aa		4.95	□□□□□ -1.62
RRI2	YOL117W	IRE1	P32361	1115 aa		4.95	□□□□□ -1.62
RRI2	YOL117W	NAM8	Q00539	523 aa	Known RBP	4.95	□□□□□ -1.62
RRI2	YOL117W	ALA1	P40825	983 aa	Known RBP	4.95	□□□□□ -1.62
RRI2	YOL117W	ALD4	P46367	519 aa	Known RBP	4.95	□□□□□ -1.62
RRI2	YOL117W	CAB1	Q04430	367 aa		4.95	□□□□□ -1.62
RRI2	YOL117W	YBR197C	P38306	217 aa		4.94	□□□□□ -1.62
RRI2	YOL117W	UBP15	P50101	1230 aa		4.94	□□□□□ -1.62
RRI2	YOL117W	CCP1	P00431	361 aa		4.93	□□□□□ -1.62
RRI2	YOL117W	TY1A-MR1	Q04215	440 aa		4.93	□□□□□ -1.62
RRI2	YOL117W	UTP4	Q06679	776 aa	Known RBP	4.93	□□□□□ -1.62
RRI2	YOL117W	PUN1	Q06991	263 aa		4.93	□□□□□ -1.62
RRI2	YOL117W	PSH1	Q12161	406 aa		4.93	□□□□□ -1.62
RRI2	YOL117W	Q0182	Q9ZZW1	134 aa		4.93	□□□□□ -1.62
RRI2	YOL117W	PDC6	P26263	563 aa	Known RBP	4.93	□□□□□ -1.62
RRI2	YOL117W	AHP1	P38013	176 aa	Known RBP	4.93	□□□□□ -1.62
RRI2	YOL117W	RPL34A	P87262	121 aa	Predicted RBP	4.93	□□□□□ -1.62
RRI2	YOL117W	PNP1	Q05788	311 aa		4.93	□□□□□ -1.62
RRI2	YOL117W	MLF3	P32047	452 aa		4.92	□□□□□ -1.62
RRI2	YOL117W	SCD5	P34758	872 aa		4.92	□□□□□ -1.62
RRI2	YOL117W	YIR007W	P40566	764 aa		4.92	□□□□□ -1.62
RRI2	YOL117W	ROG3	P43602	733 aa		4.92	□□□□□ -1.62
RRI2	YOL117W	ALD2	P47771	506 aa		4.92	□□□□□ -1.62
RRI2	YOL117W	LEU1	P07264	779 aa	Known RBP	4.91	□□□□□ -1.62
RRI2	YOL117W	GAR1	P28007	205 aa	Known RBP	4.91	□□□□□ -1.62
RRI2	YOL117W	CWH41	P53008	833 aa		4.91	□□□□□ -1.62
RRI2	YOL117W	CDC3	P32457	520 aa	Known RBP	4.91	□□□□□ -1.62
RRI2	YOL117W	BOL3	P39724	118 aa		4.91	□□□□□ -1.62
RRI2	YOL117W	LSO1	Q3E827	93 aa		4.9	□□□□□ -1.62
RRI2	YOL117W	MRPL33	P20084	86 aa		4.89	□□□□□ -1.63
RRI2	YOL117W	BOI1	P38041	980 aa	Known RBP	4.89	□□□□□ -1.63
RRI2	YOL117W	CAF120	P53836	1060 aa		4.89	□□□□□ -1.63
RRI2	YOL117W	APC11	Q12157	165 aa		4.89	□□□□□ -1.63
RRI2	YOL117W	KTR2	P33550	425 aa		4.89	□□□□□ -1.63
RRI2	YOL117W	ISC10	P32645	267 aa		4.88	□□□□□ -1.63
RRI2	YOL117W	TRL1	P09880	827 aa	Known RBP	4.87	□□□□□ -1.63
RRI2	YOL117W	RPC31	P17890	251 aa		4.87	□□□□□ -1.63
RRI2	YOL117W	VMA3	P25515	160 aa		4.87	□□□□□ -1.63
RRI2	YOL117W	CUZ1	P53899	274 aa		4.87	□□□□□ -1.63
RRI2	YOL117W	KAP122	P32767	1081 aa		4.87	□□□□□ -1.63
RRI2	YOL117W	SPR3	P41901	512 aa		4.87	□□□□□ -1.63
RRI2	YOL117W	SKP1	P52286	194 aa		4.87	□□□□□ -1.63
RRI2	YOL117W	FOX2	Q02207	900 aa	Known RBP	4.87	□□□□□ -1.63
RRI2	YOL117W	RGP1	P16664	663 aa		4.86	□□□□□ -1.63
RRI2	YOL117W	DIT1	P21623	536 aa		4.86	□□□□□ -1.63
RRI2	YOL117W	MRPL16	P38064	232 aa		4.85	□□□□□ -1.63
RRI2	YOL117W	QDR2	P40474	542 aa		4.85	□□□□□ -1.63
RRI2	YOL117W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
RRI2	YOL117W	RRN6	P32786	894 aa		4.85	□□□□□ -1.63
RRI2	YOL117W	YTA6	P40328	754 aa		4.85	□□□□□ -1.63
RRI2	YOL117W	KAR5	Q04746	504 aa		4.85	□□□□□ -1.63
RRI2	YOL117W	FUR4	P05316	633 aa	Known RBP	4.84	□□□□□ -1.63
RRI2	YOL117W	ATG1	P53104	897 aa		4.84	□□□□□ -1.63
RRI2	YOL117W	YPL062W	Q02781	134 aa		4.84	□□□□□ -1.63
RRI2	YOL117W	HAT1	Q12341	374 aa		4.84	□□□□□ -1.63
RRI2	YOL117W	MTO1	P53070	669 aa		4.84	□□□□□ -1.64
RRI2	YOL117W	SYT1	Q06836	1226 aa		4.84	□□□□□ -1.64
RRI2	YOL117W	YDR461C-A	Q2V2P7	80 aa		4.84	□□□□□ -1.64
RRI2	YOL117W	MSC7	P38694	644 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 103.8 ms