RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W YNG2P38806 282 aaKnown RBP17.76■□□□□ 0.43
SHR5YOL110W BOI2P39969 1040 aa17.76■□□□□ 0.43
SHR5YOL110W RAT1Q02792 1006 aaKnown RBP17.74■□□□□ 0.43
SHR5YOL110W CTI6Q08923 506 aa17.74■□□□□ 0.43
SHR5YOL110W SPO1P53541 631 aa17.72■□□□□ 0.43
SHR5YOL110W RIX7Q07844 837 aaKnown RBP17.72■□□□□ 0.43
SHR5YOL110W SET1P38827 1080 aaKnown RBP17.71■□□□□ 0.43
SHR5YOL110W HAT1Q12341 374 aa17.69■□□□□ 0.42
SHR5YOL110W SSK22P25390 1331 aaPredicted RBP17.69■□□□□ 0.42
SHR5YOL110W UBP12P39538 1254 aa17.68■□□□□ 0.42
SHR5YOL110W FCP1Q03254 732 aa17.68■□□□□ 0.42
SHR5YOL110W ITC1P53125 1264 aa17.67■□□□□ 0.42
SHR5YOL110W DIB1Q06819 143 aaPredicted RBP17.67■□□□□ 0.42
SHR5YOL110W ILV3P39522 585 aaKnown RBP17.66■□□□□ 0.42
SHR5YOL110W PSH1Q12161 406 aa17.66■□□□□ 0.42
SHR5YOL110W HGH1P48362 394 aaKnown RBP17.64■□□□□ 0.41
SHR5YOL110W SUP35P05453 685 aaKnown RBP17.62■□□□□ 0.41
SHR5YOL110W GCD7P32502 381 aaPredicted RBP17.62■□□□□ 0.41
SHR5YOL110W MTC5Q03897 1148 aa17.61■□□□□ 0.41
SHR5YOL110W BDF2Q07442 638 aa17.61■□□□□ 0.41
SHR5YOL110W NMD2P38798 1089 aaKnown RBP17.59■□□□□ 0.41
SHR5YOL110W SAC3P46674 1301 aa17.58■□□□□ 0.4
SHR5YOL110W MSN5P52918 1224 aa17.57■□□□□ 0.4
SHR5YOL110W IRC3Q06683 689 aa17.57■□□□□ 0.4
SHR5YOL110W SSF1P38789 453 aaPredicted RBP17.56■□□□□ 0.4
SHR5YOL110W PFF1P38244 976 aa17.54■□□□□ 0.4
SHR5YOL110W NOP2P40991 618 aaKnown RBP17.54■□□□□ 0.4
SHR5YOL110W HXT10P43581 546 aa17.53■□□□□ 0.4
SHR5YOL110W SNU66Q12420 587 aaPredicted RBP17.53■□□□□ 0.4
SHR5YOL110W NCB2Q92317 146 aa17.53■□□□□ 0.4
SHR5YOL110W SYF1Q04048 859 aaPredicted RBP17.52■□□□□ 0.4
SHR5YOL110W YKL222CP35995 705 aa17.5■□□□□ 0.39
SHR5YOL110W EAF6P47128 113 aa17.5■□□□□ 0.39
SHR5YOL110W ECM16Q04217 1267 aaKnown RBP17.5■□□□□ 0.39
SHR5YOL110W ERT1P38140 529 aa17.49■□□□□ 0.39
SHR5YOL110W BDP1P46678 594 aa17.49■□□□□ 0.39
SHR5YOL110W PMD1P32634 1753 aa17.48■□□□□ 0.39
SHR5YOL110W RPN1P38764 993 aaKnown RBP17.48■□□□□ 0.39
SHR5YOL110W UBP16Q02863 499 aa17.48■□□□□ 0.39
SHR5YOL110W SAS4Q04003 481 aa17.48■□□□□ 0.39
SHR5YOL110W SIT4P20604 311 aa17.47■□□□□ 0.39
SHR5YOL110W SMY1P32364 656 aaKnown RBP17.47■□□□□ 0.39
SHR5YOL110W CAF20P12962 161 aaKnown RBP17.46■□□□□ 0.39
SHR5YOL110W FRD1P32614 470 aaKnown RBP17.46■□□□□ 0.39
SHR5YOL110W CWH41P53008 833 aa17.46■□□□□ 0.39
SHR5YOL110W ERO1Q03103 563 aa17.46■□□□□ 0.39
SHR5YOL110W DPH6Q12429 685 aa17.46■□□□□ 0.39
SHR5YOL110W CTT1P06115 562 aa17.45■□□□□ 0.38
SHR5YOL110W RFC1P38630 861 aaKnown RBP17.45■□□□□ 0.38
SHR5YOL110W GYP5Q12344 894 aa17.44■□□□□ 0.38
SHR5YOL110W SLA1P32790 1244 aa17.43■□□□□ 0.38
SHR5YOL110W NGR1P32831 672 aaKnown RBP17.43■□□□□ 0.38
SHR5YOL110W NKP2Q06162 153 aa17.42■□□□□ 0.38
SHR5YOL110W YER156CP40093 338 aaKnown RBP17.4■□□□□ 0.38
SHR5YOL110W THI3Q07471 609 aa17.4■□□□□ 0.38
SHR5YOL110W PDR18P53756 1333 aa17.4■□□□□ 0.38
SHR5YOL110W ICP55P40051 511 aa17.39■□□□□ 0.37
SHR5YOL110W SRC1Q03707 834 aa17.39■□□□□ 0.37
SHR5YOL110W ADR1P07248 1323 aa17.39■□□□□ 0.37
SHR5YOL110W MGM1P32266 881 aa17.38■□□□□ 0.37
SHR5YOL110W CDC16P09798 840 aa17.37■□□□□ 0.37
SHR5YOL110W SEC18P18759 758 aaKnown RBP17.37■□□□□ 0.37
SHR5YOL110W YGL242CP53066 181 aa17.37■□□□□ 0.37
SHR5YOL110W MLC1P53141 149 aa17.37■□□□□ 0.37
SHR5YOL110W NOT3P06102 836 aaKnown RBP17.36■□□□□ 0.37
SHR5YOL110W KIN4Q01919 800 aa17.36■□□□□ 0.37
SHR5YOL110W RPC31P17890 251 aa17.35■□□□□ 0.37
SHR5YOL110W ECM21P38167 1117 aaKnown RBP17.35■□□□□ 0.37
SHR5YOL110W GRX6Q12438 231 aa17.35■□□□□ 0.37
SHR5YOL110W RAD50P12753 1312 aa17.35■□□□□ 0.37
SHR5YOL110W POM152P39685 1337 aa17.35■□□□□ 0.37
SHR5YOL110W AI2P03876 854 aa17.33■□□□□ 0.36
SHR5YOL110W KRE2P27809 442 aa17.32■□□□□ 0.36
SHR5YOL110W NUG1P40010 520 aaKnown RBP17.32■□□□□ 0.36
SHR5YOL110W RPT4P53549 437 aaKnown RBP17.32■□□□□ 0.36
SHR5YOL110W UBX2Q04228 584 aa17.32■□□□□ 0.36
SHR5YOL110W RRI2Q12348 645 aa17.32■□□□□ 0.36
SHR5YOL110W YNL193WP53870 558 aa17.31■□□□□ 0.36
SHR5YOL110W KTR3P38130 404 aaPredicted RBP17.3■□□□□ 0.36
SHR5YOL110W RPN7Q06103 429 aaKnown RBP17.3■□□□□ 0.36
SHR5YOL110W SPL2P38839 148 aa17.29■□□□□ 0.36
SHR5YOL110W ALO1P54783 526 aaKnown RBP17.29■□□□□ 0.36
SHR5YOL110W DUR1,2P32528 1835 aaKnown RBP17.28■□□□□ 0.36
SHR5YOL110W ICL1P28240 557 aaPredicted RBP17.28■□□□□ 0.36
SHR5YOL110W RMD1Q03441 430 aa17.28■□□□□ 0.36
SHR5YOL110W BRE1Q07457 700 aaKnown RBP17.28■□□□□ 0.36
SHR5YOL110W PIF1P07271 859 aa17.27■□□□□ 0.36
SHR5YOL110W RET1P22276 1149 aaKnown RBP17.27■□□□□ 0.36
SHR5YOL110W YKU70P32807 602 aa17.27■□□□□ 0.36
SHR5YOL110W FIG2P25653 1609 aa17.25■□□□□ 0.35
SHR5YOL110W VAS1P07806 1104 aaKnown RBP17.24■□□□□ 0.35
SHR5YOL110W IRC4Q03036 179 aa17.24■□□□□ 0.35
SHR5YOL110W HKR1P41809 1802 aa17.24■□□□□ 0.35
SHR5YOL110W TOP1P04786 769 aa17.23■□□□□ 0.35
SHR5YOL110W TIF4632P39936 914 aaKnown RBP17.23■□□□□ 0.35
SHR5YOL110W MRPS35P53292 345 aa17.23■□□□□ 0.35
SHR5YOL110W GLO3P38682 493 aaKnown RBP17.22■□□□□ 0.35
SHR5YOL110W HAL5P38970 855 aaKnown RBP17.22■□□□□ 0.35
SHR5YOL110W FAS2P19097 1887 aaKnown RBP17.22■□□□□ 0.35
SHR5YOL110W RPS9BP05755 195 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms