RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeastyeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB1YMR296C DNM1P54861 757 aa13.99□□□□□ -0.17
LCB1YMR296C YLR271WQ06152 274 aa13.99□□□□□ -0.17
LCB1YMR296C DIB1Q06819 143 aaPredicted RBP13.99□□□□□ -0.17
LCB1YMR296C SWI1P09547 1314 aa13.98□□□□□ -0.17
LCB1YMR296C HAT1Q12341 374 aa13.98□□□□□ -0.17
LCB1YMR296C SSK22P25390 1331 aaPredicted RBP13.97□□□□□ -0.17
LCB1YMR296C CAF20P12962 161 aaKnown RBP13.97□□□□□ -0.17
LCB1YMR296C ERO1Q03103 563 aa13.97□□□□□ -0.17
LCB1YMR296C IRC3Q06683 689 aa13.97□□□□□ -0.17
LCB1YMR296C CST6P40535 587 aa13.96□□□□□ -0.17
LCB1YMR296C PUF6Q04373 656 aaKnown RBP13.96□□□□□ -0.17
LCB1YMR296C OPY1P38271 328 aa13.95□□□□□ -0.18
LCB1YMR296C YJR008WP47085 338 aa13.95□□□□□ -0.18
LCB1YMR296C MRP7P12687 371 aa13.94□□□□□ -0.18
LCB1YMR296C SIT4P20604 311 aa13.94□□□□□ -0.18
LCB1YMR296C FCP1Q03254 732 aa13.94□□□□□ -0.18
LCB1YMR296C UBP16Q02863 499 aa13.93□□□□□ -0.18
LCB1YMR296C PKH1Q03407 766 aa13.93□□□□□ -0.18
LCB1YMR296C TRP5P00931 707 aaKnown RBP13.92□□□□□ -0.18
LCB1YMR296C NUP133P36161 1157 aa13.92□□□□□ -0.18
LCB1YMR296C SQS1P53866 767 aaKnown RBP13.91□□□□□ -0.18
LCB1YMR296C YGR122WP53272 402 aa13.91□□□□□ -0.18
LCB1YMR296C SYF1Q04048 859 aaPredicted RBP13.91□□□□□ -0.18
LCB1YMR296C IME2P32581 645 aa13.9□□□□□ -0.18
LCB1YMR296C ILV3P39522 585 aaKnown RBP13.89□□□□□ -0.19
LCB1YMR296C ICL1P28240 557 aaPredicted RBP13.88□□□□□ -0.19
LCB1YMR296C FRD1P32614 470 aaKnown RBP13.88□□□□□ -0.19
LCB1YMR296C RPN1P38764 993 aaKnown RBP13.87□□□□□ -0.19
LCB1YMR296C SET1P38827 1080 aaKnown RBP13.87□□□□□ -0.19
LCB1YMR296C TOP1P04786 769 aa13.85□□□□□ -0.19
LCB1YMR296C RAD24P32641 659 aa13.85□□□□□ -0.19
LCB1YMR296C YIR014WP40570 242 aa13.85□□□□□ -0.19
LCB1YMR296C SWC3P31376 625 aa13.85□□□□□ -0.19
LCB1YMR296C YPP1P46951 817 aa13.85□□□□□ -0.19
LCB1YMR296C ITC1P53125 1264 aa13.85□□□□□ -0.19
LCB1YMR296C SAS4Q04003 481 aa13.85□□□□□ -0.19
LCB1YMR296C CSI1Q04368 295 aa13.85□□□□□ -0.19
LCB1YMR296C YKU70P32807 602 aa13.84□□□□□ -0.19
LCB1YMR296C GRX6Q12438 231 aa13.83□□□□□ -0.2
LCB1YMR296C FPK1P53739 893 aa13.82□□□□□ -0.2
LCB1YMR296C SHC1P39000 512 aa13.82□□□□□ -0.2
LCB1YMR296C NOP8Q08287 484 aaPredicted RBP13.82□□□□□ -0.2
LCB1YMR296C PSH1Q12161 406 aa13.81□□□□□ -0.2
LCB1YMR296C RET1P22276 1149 aaKnown RBP13.8□□□□□ -0.2
LCB1YMR296C ATG20Q07528 640 aa13.79□□□□□ -0.2
LCB1YMR296C SAC3P46674 1301 aa13.79□□□□□ -0.2
LCB1YMR296C RPS9BP05755 195 aaKnown RBP13.79□□□□□ -0.2
LCB1YMR296C YNG2P38806 282 aaKnown RBP13.79□□□□□ -0.2
LCB1YMR296C UBP12P39538 1254 aa13.79□□□□□ -0.2
LCB1YMR296C SPO1P53541 631 aa13.79□□□□□ -0.2
LCB1YMR296C DIP2Q12220 943 aaPredicted RBP13.79□□□□□ -0.2
LCB1YMR296C BOI2P39969 1040 aa13.78□□□□□ -0.2
LCB1YMR296C DPH6Q12429 685 aa13.78□□□□□ -0.2
LCB1YMR296C RPS19AP07280 144 aaKnown RBP13.77□□□□□ -0.21
LCB1YMR296C RPS19BP07281 144 aaPredicted RBP13.77□□□□□ -0.21
LCB1YMR296C HXT10P43581 546 aa13.77□□□□□ -0.21
LCB1YMR296C HKR1P41809 1802 aa13.77□□□□□ -0.21
LCB1YMR296C ICP55P40051 511 aa13.76□□□□□ -0.21
LCB1YMR296C MTC5Q03897 1148 aa13.76□□□□□ -0.21
LCB1YMR296C SLI15P38283 698 aa13.75□□□□□ -0.21
LCB1YMR296C KRE2P27809 442 aa13.75□□□□□ -0.21
LCB1YMR296C SET4P42948 560 aa13.75□□□□□ -0.21
LCB1YMR296C FAS2P19097 1887 aaKnown RBP13.74□□□□□ -0.21
LCB1YMR296C DPL1Q05567 589 aa13.74□□□□□ -0.21
LCB1YMR296C NGR1P32831 672 aaKnown RBP13.72□□□□□ -0.21
LCB1YMR296C SPL2P38839 148 aa13.72□□□□□ -0.21
LCB1YMR296C MGM1P32266 881 aa13.72□□□□□ -0.21
LCB1YMR296C PUS5Q06244 254 aa13.72□□□□□ -0.21
LCB1YMR296C THI3Q07471 609 aa13.72□□□□□ -0.21
LCB1YMR296C PCT1P13259 424 aa13.71□□□□□ -0.21
LCB1YMR296C NKP2Q06162 153 aa13.71□□□□□ -0.21
LCB1YMR296C RPT4P53549 437 aaKnown RBP13.7□□□□□ -0.22
LCB1YMR296C NMD2P38798 1089 aaKnown RBP13.69□□□□□ -0.22
LCB1YMR296C THS1P04801 734 aaKnown RBP13.69□□□□□ -0.22
LCB1YMR296C SUP35P05453 685 aaKnown RBP13.69□□□□□ -0.22
LCB1YMR296C SSA4P22202 642 aaKnown RBP13.69□□□□□ -0.22
LCB1YMR296C YLR278CQ05854 1341 aa13.68□□□□□ -0.22
LCB1YMR296C ECM16Q04217 1267 aaKnown RBP13.68□□□□□ -0.22
LCB1YMR296C GAS5Q08193 484 aa13.68□□□□□ -0.22
LCB1YMR296C RFC1P38630 861 aaKnown RBP13.67□□□□□ -0.22
LCB1YMR296C EAF7P53911 425 aaKnown RBP13.67□□□□□ -0.22
LCB1YMR296C SNU66Q12420 587 aaPredicted RBP13.67□□□□□ -0.22
LCB1YMR296C GAP1P19145 602 aaPredicted RBP13.66□□□□□ -0.22
LCB1YMR296C MSM1P22438 575 aa13.66□□□□□ -0.22
LCB1YMR296C PEX21P50091 288 aa13.66□□□□□ -0.22
LCB1YMR296C UBX2Q04228 584 aa13.66□□□□□ -0.22
LCB1YMR296C RTG2P32608 588 aaKnown RBP13.66□□□□□ -0.22
LCB1YMR296C RAD50P12753 1312 aa13.65□□□□□ -0.22
LCB1YMR296C FIG2P25653 1609 aa13.64□□□□□ -0.23
LCB1YMR296C TIF4632P39936 914 aaKnown RBP13.64□□□□□ -0.23
LCB1YMR296C SRC1Q03707 834 aa13.64□□□□□ -0.23
LCB1YMR296C ADR1P07248 1323 aa13.64□□□□□ -0.23
LCB1YMR296C DUR1,2P32528 1835 aaKnown RBP13.64□□□□□ -0.23
LCB1YMR296C GCD7P32502 381 aaPredicted RBP13.63□□□□□ -0.23
LCB1YMR296C FET4P40988 552 aa13.63□□□□□ -0.23
LCB1YMR296C IRC4Q03036 179 aa13.63□□□□□ -0.23
LCB1YMR296C RLF2Q12495 606 aa13.63□□□□□ -0.23
LCB1YMR296C LCB1P25045 558 aaKnown RBP13.62□□□□□ -0.23
LCB1YMR296C GLC3P32775 704 aa13.62□□□□□ -0.23
LCB1YMR296C RRG1Q12167 365 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 5,963 RNA–protein pairs in 73.8 ms