RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A YNG2P38806 282 aaKnown RBP15.6■□□□□ 0.09
LSM3YLR438C-A DIB1Q06819 143 aaPredicted RBP15.6■□□□□ 0.09
LSM3YLR438C-A PUF6Q04373 656 aaKnown RBP15.59■□□□□ 0.09
LSM3YLR438C-A HAT1Q12341 374 aa15.59■□□□□ 0.09
LSM3YLR438C-A SUP35P05453 685 aaKnown RBP15.57■□□□□ 0.08
LSM3YLR438C-A BOI2P39969 1040 aa15.57■□□□□ 0.08
LSM3YLR438C-A POL32P47110 350 aa15.57■□□□□ 0.08
LSM3YLR438C-A UBP12P39538 1254 aa15.55■□□□□ 0.08
LSM3YLR438C-A ITC1P53125 1264 aa15.55■□□□□ 0.08
LSM3YLR438C-A SET1P38827 1080 aaKnown RBP15.54■□□□□ 0.08
LSM3YLR438C-A MSN5P52918 1224 aa15.54■□□□□ 0.08
LSM3YLR438C-A FCP1Q03254 732 aa15.54■□□□□ 0.08
LSM3YLR438C-A IRC3Q06683 689 aa15.54■□□□□ 0.08
LSM3YLR438C-A BDF2Q07442 638 aa15.54■□□□□ 0.08
LSM3YLR438C-A PSH1Q12161 406 aa15.54■□□□□ 0.08
LSM3YLR438C-A SSK22P25390 1331 aaPredicted RBP15.53■□□□□ 0.08
LSM3YLR438C-A SPO1P53541 631 aa15.53■□□□□ 0.08
LSM3YLR438C-A PFF1P38244 976 aa15.49■□□□□ 0.07
LSM3YLR438C-A HGH1P48362 394 aaKnown RBP15.49■□□□□ 0.07
LSM3YLR438C-A YKL222CP35995 705 aa15.48■□□□□ 0.07
LSM3YLR438C-A MTC5Q03897 1148 aa15.48■□□□□ 0.07
LSM3YLR438C-A EAF6P47128 113 aa15.47■□□□□ 0.07
LSM3YLR438C-A SNU66Q12420 587 aaPredicted RBP15.47■□□□□ 0.07
LSM3YLR438C-A SYF1Q04048 859 aaPredicted RBP15.46■□□□□ 0.07
LSM3YLR438C-A CTT1P06115 562 aa15.45■□□□□ 0.06
LSM3YLR438C-A CWH41P53008 833 aa15.45■□□□□ 0.06
LSM3YLR438C-A UTP10P42945 1769 aaKnown RBP15.44■□□□□ 0.06
LSM3YLR438C-A GCD7P32502 381 aaPredicted RBP15.44■□□□□ 0.06
LSM3YLR438C-A SIT4P20604 311 aa15.43■□□□□ 0.06
LSM3YLR438C-A ERT1P38140 529 aa15.43■□□□□ 0.06
LSM3YLR438C-A RPN1P38764 993 aaKnown RBP15.43■□□□□ 0.06
LSM3YLR438C-A SSF1P38789 453 aaPredicted RBP15.43■□□□□ 0.06
LSM3YLR438C-A NMD2P38798 1089 aaKnown RBP15.43■□□□□ 0.06
LSM3YLR438C-A ILV3P39522 585 aaKnown RBP15.42■□□□□ 0.06
LSM3YLR438C-A SAS4Q04003 481 aa15.42■□□□□ 0.06
LSM3YLR438C-A NCB2Q92317 146 aa15.42■□□□□ 0.06
LSM3YLR438C-A CAF20P12962 161 aaKnown RBP15.41■□□□□ 0.06
LSM3YLR438C-A FRD1P32614 470 aaKnown RBP15.41■□□□□ 0.06
LSM3YLR438C-A SAC3P46674 1301 aa15.41■□□□□ 0.06
LSM3YLR438C-A SMY1P32364 656 aaKnown RBP15.4■□□□□ 0.06
LSM3YLR438C-A ERO1Q03103 563 aa15.4■□□□□ 0.06
LSM3YLR438C-A HXT10P43581 546 aa15.39■□□□□ 0.05
LSM3YLR438C-A YER156CP40093 338 aaKnown RBP15.38■□□□□ 0.05
LSM3YLR438C-A UBP16Q02863 499 aa15.38■□□□□ 0.05
LSM3YLR438C-A DPH6Q12429 685 aa15.38■□□□□ 0.05
LSM3YLR438C-A BDP1P46678 594 aa15.37■□□□□ 0.05
LSM3YLR438C-A NGR1P32831 672 aaKnown RBP15.36■□□□□ 0.05
LSM3YLR438C-A SRC1Q03707 834 aa15.35■□□□□ 0.05
LSM3YLR438C-A ECM16Q04217 1267 aaKnown RBP15.35■□□□□ 0.05
LSM3YLR438C-A RFC1P38630 861 aaKnown RBP15.34■□□□□ 0.05
LSM3YLR438C-A GYP5Q12344 894 aa15.33■□□□□ 0.04
LSM3YLR438C-A GRX6Q12438 231 aa15.33■□□□□ 0.04
LSM3YLR438C-A ICP55P40051 511 aa15.32■□□□□ 0.04
LSM3YLR438C-A KIN4Q01919 800 aa15.32■□□□□ 0.04
LSM3YLR438C-A THI3Q07471 609 aa15.32■□□□□ 0.04
LSM3YLR438C-A MGM1P32266 881 aa15.31■□□□□ 0.04
LSM3YLR438C-A SEC18P18759 758 aaKnown RBP15.29■□□□□ 0.04
LSM3YLR438C-A SLA1P32790 1244 aa15.29■□□□□ 0.04
LSM3YLR438C-A YKU70P32807 602 aa15.29■□□□□ 0.04
LSM3YLR438C-A ICL1P28240 557 aaPredicted RBP15.28■□□□□ 0.04
LSM3YLR438C-A NUG1P40010 520 aaKnown RBP15.28■□□□□ 0.04
LSM3YLR438C-A KRE2P27809 442 aa15.27■□□□□ 0.04
LSM3YLR438C-A UBX2Q04228 584 aa15.27■□□□□ 0.04
LSM3YLR438C-A NKP2Q06162 153 aa15.27■□□□□ 0.04
LSM3YLR438C-A RRI2Q12348 645 aa15.27■□□□□ 0.04
LSM3YLR438C-A ADR1P07248 1323 aa15.26■□□□□ 0.03
LSM3YLR438C-A PDR18P53756 1333 aa15.26■□□□□ 0.03
LSM3YLR438C-A YGL242CP53066 181 aa15.26■□□□□ 0.03
LSM3YLR438C-A MLC1P53141 149 aa15.26■□□□□ 0.03
LSM3YLR438C-A TOP1P04786 769 aa15.25■□□□□ 0.03
LSM3YLR438C-A SSA1P10591 642 aaKnown RBP15.25■□□□□ 0.03
LSM3YLR438C-A RPT4P53549 437 aaKnown RBP15.25■□□□□ 0.03
LSM3YLR438C-A RET1P22276 1149 aaKnown RBP15.24■□□□□ 0.03
LSM3YLR438C-A TIF4632P39936 914 aaKnown RBP15.24■□□□□ 0.03
LSM3YLR438C-A NOP2P40991 618 aaKnown RBP15.24■□□□□ 0.03
LSM3YLR438C-A RPS9BP05755 195 aaKnown RBP15.23■□□□□ 0.03
LSM3YLR438C-A NOT3P06102 836 aaKnown RBP15.23■□□□□ 0.03
LSM3YLR438C-A POM152P39685 1337 aa15.22■□□□□ 0.03
LSM3YLR438C-A ECM21P38167 1117 aaKnown RBP15.22■□□□□ 0.03
LSM3YLR438C-A YNL193WP53870 558 aa15.22■□□□□ 0.03
LSM3YLR438C-A AI2P03876 854 aa15.21■□□□□ 0.03
LSM3YLR438C-A CDC16P09798 840 aa15.21■□□□□ 0.03
LSM3YLR438C-A SPL2P38839 148 aa15.21■□□□□ 0.03
LSM3YLR438C-A PIF1P07271 859 aa15.2■□□□□ 0.02
LSM3YLR438C-A SQS1P53866 767 aaKnown RBP15.2■□□□□ 0.02
LSM3YLR438C-A PMD1P32634 1753 aa15.2■□□□□ 0.02
LSM3YLR438C-A RPC31P17890 251 aa15.19■□□□□ 0.02
LSM3YLR438C-A SHC1P39000 512 aa15.19■□□□□ 0.02
LSM3YLR438C-A RMD1Q03441 430 aa15.19■□□□□ 0.02
LSM3YLR438C-A RPN7Q06103 429 aaKnown RBP15.19■□□□□ 0.02
LSM3YLR438C-A ALO1P54783 526 aaKnown RBP15.18■□□□□ 0.02
LSM3YLR438C-A IRC4Q03036 179 aa15.18■□□□□ 0.02
LSM3YLR438C-A BRE1Q07457 700 aaKnown RBP15.18■□□□□ 0.02
LSM3YLR438C-A RAD50P12753 1312 aa15.17■□□□□ 0.02
LSM3YLR438C-A PSF3Q12146 194 aa15.17■□□□□ 0.02
LSM3YLR438C-A KTR3P38130 404 aaPredicted RBP15.16■□□□□ 0.02
LSM3YLR438C-A JJJ2P46997 583 aa15.16■□□□□ 0.02
LSM3YLR438C-A DPL1Q05567 589 aa15.16■□□□□ 0.02
LSM3YLR438C-A VAS1P07806 1104 aaKnown RBP15.15■□□□□ 0.02
LSM3YLR438C-A LCB1P25045 558 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 5,963 RNA–protein pairs in 61.7 ms