RNA–Protein interactions for RNA: YLR428C

YLR428C, Transcript of Dubious open reading frame, yeast

Gene YLR428C, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR428C	YLR428C	SIS2	P36024	562 aa		4.99	□□□□□ -1.61
YLR428C	YLR428C	EMP47	P43555	445 aa		4.99	□□□□□ -1.61
YLR428C	YLR428C	HPF1	Q05164	967 aa		4.99	□□□□□ -1.61
YLR428C	YLR428C	TSR4	P25040	408 aa		4.98	□□□□□ -1.61
YLR428C	YLR428C	TOA1	P32773	286 aa		4.98	□□□□□ -1.61
YLR428C	YLR428C	IPL1	P38991	367 aa		4.98	□□□□□ -1.61
YLR428C	YLR428C	YFR016C	P43597	1233 aa	Known RBP	4.98	□□□□□ -1.61
YLR428C	YLR428C	RPS0B	P46654	252 aa	Known RBP	4.98	□□□□□ -1.61
YLR428C	YLR428C	ALD2	P47771	506 aa		4.98	□□□□□ -1.61
YLR428C	YLR428C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
YLR428C	YLR428C	SYH1	Q02875	849 aa	Known RBP	4.98	□□□□□ -1.61
YLR428C	YLR428C	MCM16	Q12262	181 aa		4.98	□□□□□ -1.61
YLR428C	YLR428C	VAC17	P25591	423 aa		4.97	□□□□□ -1.61
YLR428C	YLR428C	TPM2	P40414	161 aa		4.97	□□□□□ -1.61
YLR428C	YLR428C	TY4A-J	P47023	414 aa		4.97	□□□□□ -1.61
YLR428C	YLR428C	SSB1	P11484	613 aa	Known RBP	4.96	□□□□□ -1.62
YLR428C	YLR428C	SRP40	P32583	406 aa	Predicted RBP	4.96	□□□□□ -1.62
YLR428C	YLR428C	SSB2	P40150	613 aa	Known RBP	4.96	□□□□□ -1.62
YLR428C	YLR428C	RPT2	P40327	437 aa	Known RBP	4.96	□□□□□ -1.62
YLR428C	YLR428C	KIP3	P53086	805 aa	Known RBP	4.96	□□□□□ -1.62
YLR428C	YLR428C	KTR7	P40504	517 aa		4.95	□□□□□ -1.62
YLR428C	YLR428C	MSC6	Q08818	692 aa	Known RBP	4.95	□□□□□ -1.62
YLR428C	YLR428C	ENO1	P00924	437 aa	Known RBP	4.94	□□□□□ -1.62
YLR428C	YLR428C	TPD3	P31383	635 aa		4.94	□□□□□ -1.62
YLR428C	YLR428C	MFT1	P33441	392 aa	Known RBP	4.94	□□□□□ -1.62
YLR428C	YLR428C	CSE4	P36012	229 aa		4.94	□□□□□ -1.62
YLR428C	YLR428C	YIR007W	P40566	764 aa		4.94	□□□□□ -1.62
YLR428C	YLR428C	POL32	P47110	350 aa		4.94	□□□□□ -1.62
YLR428C	YLR428C	YGL081W	P53156	320 aa		4.94	□□□□□ -1.62
YLR428C	YLR428C	POB3	Q04636	552 aa	Known RBP	4.94	□□□□□ -1.62
YLR428C	YLR428C	HIF1	Q12373	385 aa		4.94	□□□□□ -1.62
YLR428C	YLR428C	PUP1	P25043	261 aa		4.93	□□□□□ -1.62
YLR428C	YLR428C	GUT2	P32191	649 aa		4.93	□□□□□ -1.62
YLR428C	YLR428C	STE20	Q03497	939 aa	Known RBP	4.93	□□□□□ -1.62
YLR428C	YLR428C	TMA64	Q04600	565 aa	Known RBP	4.93	□□□□□ -1.62
YLR428C	YLR428C	OPT2	Q06593	877 aa		4.93	□□□□□ -1.62
YLR428C	YLR428C	YPR084W	Q06821	456 aa		4.93	□□□□□ -1.62
YLR428C	YLR428C	YBL113C	Q7M4S9	792 aa		4.93	□□□□□ -1.62
YLR428C	YLR428C	PMC1	P38929	1173 aa	Predicted RBP	4.92	□□□□□ -1.62
YLR428C	YLR428C	ICP55	P40051	511 aa		4.92	□□□□□ -1.62
YLR428C	YLR428C	YML083C	Q04526	418 aa		4.92	□□□□□ -1.62
YLR428C	YLR428C	JIP5	Q06214	492 aa	Predicted RBP	4.92	□□□□□ -1.62
YLR428C	YLR428C	BRE1	Q07457	700 aa	Known RBP	4.92	□□□□□ -1.62
YLR428C	YLR428C	SUP45	P12385	437 aa	Known RBP	4.91	□□□□□ -1.62
YLR428C	YLR428C	GAL11	P19659	1081 aa		4.91	□□□□□ -1.62
YLR428C	YLR428C	YKL091C	P33324	310 aa	Known RBP	4.91	□□□□□ -1.62
YLR428C	YLR428C	SOH1	P38633	127 aa		4.91	□□□□□ -1.62
YLR428C	YLR428C	YDL121C	Q07541	149 aa		4.91	□□□□□ -1.62
YLR428C	YLR428C	KAR1	P11927	433 aa		4.9	□□□□□ -1.63
YLR428C	YLR428C	SPT5	P27692	1063 aa	Known RBP	4.9	□□□□□ -1.63
YLR428C	YLR428C	RPS0A	P32905	252 aa	Known RBP	4.9	□□□□□ -1.63
YLR428C	YLR428C	MGE1	P38523	228 aa		4.9	□□□□□ -1.63
YLR428C	YLR428C	ERP2	P39704	215 aa		4.9	□□□□□ -1.63
YLR428C	YLR428C	NOC2	P39744	710 aa	Known RBP	4.9	□□□□□ -1.63
YLR428C	YLR428C	RIM21	P48565	533 aa		4.9	□□□□□ -1.63
YLR428C	YLR428C	ALG12	P53730	551 aa		4.9	□□□□□ -1.63
YLR428C	YLR428C	NAF1	P53919	492 aa	Known RBP	4.9	□□□□□ -1.63
YLR428C	YLR428C	OYE2	Q03558	400 aa	Known RBP	4.9	□□□□□ -1.63
YLR428C	YLR428C	CEF1	Q03654	590 aa	Predicted RBP	4.9	□□□□□ -1.63
YLR428C	YLR428C	ISR1	Q06098	443 aa	Known RBP	4.9	□□□□□ -1.63
YLR428C	YLR428C	RRP15	Q06511	250 aa	Predicted RBP	4.9	□□□□□ -1.63
YLR428C	YLR428C	VMA4	P22203	233 aa	Known RBP	4.89	□□□□□ -1.63
YLR428C	YLR428C	UGA3	P26370	528 aa		4.89	□□□□□ -1.63
YLR428C	YLR428C	DPB3	P27344	201 aa		4.89	□□□□□ -1.63
YLR428C	YLR428C	BOI2	P39969	1040 aa		4.89	□□□□□ -1.63
YLR428C	YLR428C	VPS27	P40343	622 aa	Known RBP	4.89	□□□□□ -1.63
YLR428C	YLR428C	AIM21	P40563	679 aa		4.89	□□□□□ -1.63
YLR428C	YLR428C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
YLR428C	YLR428C	DFG5	Q05031	458 aa		4.89	□□□□□ -1.63
YLR428C	YLR428C	YOL057W	Q08225	711 aa		4.89	□□□□□ -1.63
YLR428C	YLR428C	RAD2	P07276	1031 aa		4.88	□□□□□ -1.63
YLR428C	YLR428C	RDS2	P19541	446 aa	Known RBP	4.88	□□□□□ -1.63
YLR428C	YLR428C	SEC8	P32855	1065 aa		4.88	□□□□□ -1.63
YLR428C	YLR428C	MKS1	P34072	584 aa		4.88	□□□□□ -1.63
YLR428C	YLR428C	GRX7	P38068	203 aa		4.88	□□□□□ -1.63
YLR428C	YLR428C	ERP5	P38819	212 aa		4.88	□□□□□ -1.63
YLR428C	YLR428C	THI12	P42883	340 aa		4.88	□□□□□ -1.63
YLR428C	YLR428C	THI5	P43534	340 aa		4.88	□□□□□ -1.63
YLR428C	YLR428C	IES1	P43579	692 aa		4.88	□□□□□ -1.63
YLR428C	YLR428C	YJL049W	P47048	450 aa		4.88	□□□□□ -1.63
YLR428C	YLR428C	THI11	P47183	340 aa		4.88	□□□□□ -1.63
YLR428C	YLR428C	GIR2	Q03768	265 aa	Predicted RBP	4.88	□□□□□ -1.63
YLR428C	YLR428C	ECM16	Q04217	1267 aa	Known RBP	4.88	□□□□□ -1.63
YLR428C	YLR428C	ATG20	Q07528	640 aa		4.88	□□□□□ -1.63
YLR428C	YLR428C	THI13	Q07748	340 aa		4.88	□□□□□ -1.63
YLR428C	YLR428C	FRA1	Q07825	749 aa		4.88	□□□□□ -1.63
YLR428C	YLR428C	PUS1	Q12211	544 aa	Known RBP	4.88	□□□□□ -1.63
YLR428C	YLR428C	YGR161W-C	Q3E744	92 aa		4.88	□□□□□ -1.63
YLR428C	YLR428C	MIP1	P15801	1254 aa		4.87	□□□□□ -1.63
YLR428C	YLR428C	ATE1	P16639	503 aa		4.87	□□□□□ -1.63
YLR428C	YLR428C	TGL4	P36165	910 aa		4.87	□□□□□ -1.63
YLR428C	YLR428C	PPX1	P38698	397 aa		4.87	□□□□□ -1.63
YLR428C	YLR428C	HAL5	P38970	855 aa	Known RBP	4.87	□□□□□ -1.63
YLR428C	YLR428C	VMS1	Q04311	632 aa	Known RBP	4.87	□□□□□ -1.63
YLR428C	YLR428C	UTP14	Q04500	899 aa	Known RBP	4.87	□□□□□ -1.63
YLR428C	YLR428C	YOR131C	Q12486	218 aa		4.87	□□□□□ -1.63
YLR428C	YLR428C	CIT2	P08679	460 aa		4.86	□□□□□ -1.63
YLR428C	YLR428C	YHL050C	P38721	697 aa		4.86	□□□□□ -1.63
YLR428C	YLR428C	YHR219W	P38900	624 aa		4.86	□□□□□ -1.63
YLR428C	YLR428C	KAR5	Q04746	504 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms