RNA–Protein interactions for RNA: YLR340W

RPP0, Transcript of Conserved ribosomal protein P0 of the ribosomal stalk, yeastyeast

Gene RPP0, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP0YLR340W CHL1P22516 861 aaPredicted RBP6.37□□□□□ -1.39
RPP0YLR340W SOL3P38858 249 aa6.37□□□□□ -1.39
RPP0YLR340W OSM1P21375 501 aaKnown RBP6.36□□□□□ -1.39
RPP0YLR340W PRE3P38624 215 aa6.36□□□□□ -1.39
RPP0YLR340W NST1P53935 1240 aa6.36□□□□□ -1.39
RPP0YLR340W INP54Q08227 384 aaKnown RBP6.36□□□□□ -1.39
RPP0YLR340W DUS1P53759 423 aaKnown RBP6.35□□□□□ -1.39
RPP0YLR340W NYV1Q12255 253 aa6.35□□□□□ -1.39
RPP0YLR340W SLI15P38283 698 aa6.34□□□□□ -1.39
RPP0YLR340W NOP53Q12080 455 aaKnown RBP6.34□□□□□ -1.39
RPP0YLR340W PDI1P17967 522 aaKnown RBP6.33□□□□□ -1.4
RPP0YLR340W ETP1P38748 585 aaKnown RBP6.33□□□□□ -1.4
RPP0YLR340W RTF1P53064 558 aa6.33□□□□□ -1.4
RPP0YLR340W YBP2P53169 641 aa6.32□□□□□ -1.4
RPP0YLR340W YDR344CQ05510 147 aa6.32□□□□□ -1.4
RPP0YLR340W TUM1Q08686 304 aaKnown RBP6.32□□□□□ -1.4
RPP0YLR340W SEC3P33332 1336 aaKnown RBP6.31□□□□□ -1.4
RPP0YLR340W POM152P39685 1337 aa6.31□□□□□ -1.4
RPP0YLR340W THS1P04801 734 aaKnown RBP6.31□□□□□ -1.4
RPP0YLR340W MPH3P0CE00 602 aa6.31□□□□□ -1.4
RPP0YLR340W SMY1P32364 656 aaKnown RBP6.31□□□□□ -1.4
RPP0YLR340W BCK2P33306 851 aa6.31□□□□□ -1.4
RPP0YLR340W MID1P41821 548 aa6.31□□□□□ -1.4
RPP0YLR340W CTI6Q08923 506 aa6.31□□□□□ -1.4
RPP0YLR340W AUS1Q08409 1394 aa6.31□□□□□ -1.4
RPP0YLR340W YLR278CQ05854 1341 aa6.3□□□□□ -1.4
RPP0YLR340W TOP1P04786 769 aa6.3□□□□□ -1.4
RPP0YLR340W RET1P22276 1149 aaKnown RBP6.3□□□□□ -1.4
RPP0YLR340W PFF1P38244 976 aa6.3□□□□□ -1.4
RPP0YLR340W AI4P03878 556 aa6.29□□□□□ -1.4
RPP0YLR340W ORC1P54784 914 aaPredicted RBP6.29□□□□□ -1.4
RPP0YLR340W ATG20Q07528 640 aa6.29□□□□□ -1.4
RPP0YLR340W RPS9BP05755 195 aaKnown RBP6.28□□□□□ -1.4
RPP0YLR340W RTG2P32608 588 aaKnown RBP6.28□□□□□ -1.4
RPP0YLR340W SCT1P32784 759 aa6.28□□□□□ -1.4
RPP0YLR340W ELP4Q02884 456 aaKnown RBP6.28□□□□□ -1.4
RPP0YLR340W MLP1Q02455 1875 aaKnown RBP6.28□□□□□ -1.4
RPP0YLR340W NUP145P49687 1317 aa6.27□□□□□ -1.41
RPP0YLR340W ICL1P28240 557 aaPredicted RBP6.27□□□□□ -1.41
RPP0YLR340W GRX4P32642 244 aa6.27□□□□□ -1.41
RPP0YLR340W SHC1P39000 512 aa6.27□□□□□ -1.41
RPP0YLR340W YGR273CP53329 174 aa6.27□□□□□ -1.41
RPP0YLR340W TAP42Q04372 366 aa6.27□□□□□ -1.41
RPP0YLR340W SDH2P21801 266 aa6.26□□□□□ -1.41
RPP0YLR340W ILV3P39522 585 aaKnown RBP6.26□□□□□ -1.41
RPP0YLR340W VHR2P40041 505 aa6.26□□□□□ -1.41
RPP0YLR340W BUD27P43573 796 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
RPP0YLR340W TEA1P47988 759 aa6.25□□□□□ -1.41
RPP0YLR340W ARH1P48360 493 aa6.25□□□□□ -1.41
RPP0YLR340W ERO1Q03103 563 aa6.25□□□□□ -1.41
RPP0YLR340W HIM1Q06674 414 aa6.25□□□□□ -1.41
RPP0YLR340W FAS2P19097 1887 aaKnown RBP6.25□□□□□ -1.41
RPP0YLR340W LPD1P09624 499 aaKnown RBP6.24□□□□□ -1.41
RPP0YLR340W UTP10P42945 1769 aaKnown RBP6.23□□□□□ -1.41
RPP0YLR340W YKU70P32807 602 aa6.23□□□□□ -1.41
RPP0YLR340W VRP1P37370 817 aa6.23□□□□□ -1.41
RPP0YLR340W PMD1P32634 1753 aa6.22□□□□□ -1.41
RPP0YLR340W HSP104P31539 908 aaKnown RBP6.22□□□□□ -1.41
RPP0YLR340W SET1P38827 1080 aaKnown RBP6.22□□□□□ -1.41
RPP0YLR340W RMT2Q03305 412 aa6.22□□□□□ -1.41
RPP0YLR340W PEX29Q03370 554 aa6.22□□□□□ -1.41
RPP0YLR340W IRC3Q06683 689 aa6.22□□□□□ -1.41
RPP0YLR340W FIG2P25653 1609 aa6.21□□□□□ -1.41
RPP0YLR340W MAC1P35192 417 aa6.21□□□□□ -1.42
RPP0YLR340W YIL089WP40500 205 aa6.21□□□□□ -1.42
RPP0YLR340W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
RPP0YLR340W DSD1P53095 428 aa6.21□□□□□ -1.42
RPP0YLR340W CTF4Q01454 927 aa6.21□□□□□ -1.42
RPP0YLR340W RAT1Q02792 1006 aaKnown RBP6.21□□□□□ -1.42
RPP0YLR340W BDF2Q07442 638 aa6.21□□□□□ -1.42
RPP0YLR340W CAF20P12962 161 aaKnown RBP6.2□□□□□ -1.42
RPP0YLR340W SIT4P20604 311 aa6.2□□□□□ -1.42
RPP0YLR340W SER1P33330 395 aaKnown RBP6.2□□□□□ -1.42
RPP0YLR340W MDG1P53885 366 aa6.2□□□□□ -1.42
RPP0YLR340W GRX6Q12438 231 aa6.2□□□□□ -1.42
RPP0YLR340W PHM7Q12252 991 aa6.19□□□□□ -1.42
RPP0YLR340W SRF1Q12516 437 aa6.19□□□□□ -1.42
RPP0YLR340W VPS13Q07878 3144 aa6.18□□□□□ -1.42
RPP0YLR340W GAP1P19145 602 aaPredicted RBP6.18□□□□□ -1.42
RPP0YLR340W SPT23P35210 1082 aa6.18□□□□□ -1.42
RPP0YLR340W XDJ1P39102 459 aa6.18□□□□□ -1.42
RPP0YLR340W FET4P40988 552 aa6.18□□□□□ -1.42
RPP0YLR340W YFR016CP43597 1233 aaKnown RBP6.18□□□□□ -1.42
RPP0YLR340W HAP5Q02516 242 aa6.18□□□□□ -1.42
RPP0YLR340W TIF6Q12522 245 aaKnown RBP6.18□□□□□ -1.42
RPP0YLR340W MSM1P22438 575 aa6.17□□□□□ -1.42
RPP0YLR340W GLC3P32775 704 aa6.17□□□□□ -1.42
RPP0YLR340W YGL082WP53155 381 aa6.17□□□□□ -1.42
RPP0YLR340W DIB1Q06819 143 aaPredicted RBP6.17□□□□□ -1.42
RPP0YLR340W MPC54Q08550 464 aa6.17□□□□□ -1.42
RPP0YLR340W YPR117WQ06116 2489 aa6.16□□□□□ -1.42
RPP0YLR340W PEA2P40091 420 aa6.16□□□□□ -1.42
RPP0YLR340W TIM50Q02776 476 aa6.16□□□□□ -1.42
RPP0YLR340W ALE1Q08548 619 aa6.16□□□□□ -1.42
RPP0YLR340W TYW1Q08960 810 aaKnown RBP6.16□□□□□ -1.42
RPP0YLR340W KEX1P09620 729 aa6.15□□□□□ -1.42
RPP0YLR340W KAR2P16474 682 aaKnown RBP6.15□□□□□ -1.42
RPP0YLR340W NMA111P53920 997 aa6.15□□□□□ -1.42
RPP0YLR340W UBP16Q02863 499 aa6.15□□□□□ -1.42
RPP0YLR340W AIM7Q12156 149 aa6.15□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms