RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeastyeast

Gene RSA3, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSA3YLR221C ISR1Q06098 443 aaKnown RBP8.87□□□□□ -0.99
RSA3YLR221C CDC19P00549 500 aaKnown RBP8.86□□□□□ -0.99
RSA3YLR221C RDS2P19541 446 aaKnown RBP8.85□□□□□ -0.99
RSA3YLR221C APL6P46682 809 aa8.85□□□□□ -0.99
RSA3YLR221C VTC4P47075 721 aa8.85□□□□□ -0.99
RSA3YLR221C YML083CQ04526 418 aa8.85□□□□□ -0.99
RSA3YLR221C NAM8Q00539 523 aaKnown RBP8.83□□□□□ -1
RSA3YLR221C WTM2Q12206 467 aa8.83□□□□□ -1
RSA3YLR221C DAL1P32375 460 aa8.81□□□□□ -1
RSA3YLR221C UTR2P32623 467 aa8.81□□□□□ -1
RSA3YLR221C KTR7P40504 517 aa8.81□□□□□ -1
RSA3YLR221C SPT2P06843 333 aaPredicted RBP8.8□□□□□ -1
RSA3YLR221C GAL2P13181 574 aa8.8□□□□□ -1
RSA3YLR221C DAT1P13483 248 aaKnown RBP8.8□□□□□ -1
RSA3YLR221C HAL5P38970 855 aaKnown RBP8.8□□□□□ -1
RSA3YLR221C ECM23Q02710 187 aa8.8□□□□□ -1
RSA3YLR221C UTP13Q05946 817 aaKnown RBP8.8□□□□□ -1
RSA3YLR221C SLD2P34252 453 aa8.79□□□□□ -1
RSA3YLR221C DPH6Q12429 685 aa8.79□□□□□ -1
RSA3YLR221C LYS5P50113 272 aa8.77□□□□□ -1.01
RSA3YLR221C SOH1P38633 127 aa8.76□□□□□ -1.01
RSA3YLR221C TBS1P38114 1094 aa8.75□□□□□ -1.01
RSA3YLR221C PHO87P25360 923 aa8.74□□□□□ -1.01
RSA3YLR221C UBX7P38349 436 aa8.74□□□□□ -1.01
RSA3YLR221C SSN3P39073 555 aa8.74□□□□□ -1.01
RSA3YLR221C MSN5P52918 1224 aa8.74□□□□□ -1.01
RSA3YLR221C CUZ1P53899 274 aa8.74□□□□□ -1.01
RSA3YLR221C SSF1P38789 453 aaPredicted RBP8.73□□□□□ -1.01
RSA3YLR221C UTP7P40055 554 aaKnown RBP8.73□□□□□ -1.01
RSA3YLR221C JJJ3P47138 172 aa8.73□□□□□ -1.01
RSA3YLR221C HAP4P14064 554 aa8.72□□□□□ -1.01
RSA3YLR221C UBP15P50101 1230 aa8.71□□□□□ -1.02
RSA3YLR221C MTC5Q03897 1148 aa8.71□□□□□ -1.02
RSA3YLR221C HAT1Q12341 374 aa8.71□□□□□ -1.02
RSA3YLR221C TY1A-DR3Q12441 440 aa8.71□□□□□ -1.02
RSA3YLR221C SLA1P32790 1244 aa8.7□□□□□ -1.02
RSA3YLR221C PUF6Q04373 656 aaKnown RBP8.7□□□□□ -1.02
RSA3YLR221C HDA3Q06623 655 aa8.7□□□□□ -1.02
RSA3YLR221C AHP1P38013 176 aaKnown RBP8.68□□□□□ -1.02
RSA3YLR221C CEM1P39525 442 aa8.67□□□□□ -1.02
RSA3YLR221C YFL034WP43564 1073 aa8.67□□□□□ -1.02
RSA3YLR221C SUM1P46676 1062 aa8.67□□□□□ -1.02
RSA3YLR221C GAS4Q08271 471 aa8.67□□□□□ -1.02
RSA3YLR221C TSC13Q99190 310 aa8.67□□□□□ -1.02
RSA3YLR221C ALA1P40825 983 aaKnown RBP8.66□□□□□ -1.02
RSA3YLR221C ACS2P52910 683 aaKnown RBP8.66□□□□□ -1.02
RSA3YLR221C YMR265CQ03508 461 aaKnown RBP8.65□□□□□ -1.02
RSA3YLR221C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
RSA3YLR221C DIT1P21623 536 aa8.64□□□□□ -1.03
RSA3YLR221C ICP55P40051 511 aa8.64□□□□□ -1.03
RSA3YLR221C JJJ2P46997 583 aa8.63□□□□□ -1.03
RSA3YLR221C ROM1P53046 1155 aa8.63□□□□□ -1.03
RSA3YLR221C CWC15Q03772 175 aaKnown RBP8.63□□□□□ -1.03
RSA3YLR221C PDI1P17967 522 aaKnown RBP8.62□□□□□ -1.03
RSA3YLR221C MDJ1P35191 511 aa8.62□□□□□ -1.03
RSA3YLR221C STM1P39015 273 aaKnown RBP8.61□□□□□ -1.03
RSA3YLR221C KRE33P53914 1056 aaKnown RBP8.61□□□□□ -1.03
RSA3YLR221C SEN54Q02825 467 aaPredicted RBP8.61□□□□□ -1.03
RSA3YLR221C KAR5Q04746 504 aa8.61□□□□□ -1.03
RSA3YLR221C PUS1Q12211 544 aaKnown RBP8.61□□□□□ -1.03
RSA3YLR221C VAN1P23642 535 aa8.6□□□□□ -1.03
RSA3YLR221C AIM9P40053 627 aaKnown RBP8.6□□□□□ -1.03
RSA3YLR221C SYT1Q06836 1226 aa8.6□□□□□ -1.03
RSA3YLR221C YBL113CQ7M4S9 792 aa8.6□□□□□ -1.03
RSA3YLR221C HEM3P28789 327 aa8.59□□□□□ -1.03
RSA3YLR221C PHM7Q12252 991 aa8.59□□□□□ -1.03
RSA3YLR221C SRS2P12954 1174 aa8.58□□□□□ -1.04
RSA3YLR221C IRE1P32361 1115 aa8.58□□□□□ -1.04
RSA3YLR221C SHM1P37292 490 aaPredicted RBP8.58□□□□□ -1.04
RSA3YLR221C NSG2P53898 299 aa8.58□□□□□ -1.04
RSA3YLR221C ADE12P80210 433 aaKnown RBP8.58□□□□□ -1.04
RSA3YLR221C TRS33Q99394 268 aa8.58□□□□□ -1.04
RSA3YLR221C SWI5P08153 709 aa8.57□□□□□ -1.04
RSA3YLR221C TPS3P38426 1054 aaKnown RBP8.57□□□□□ -1.04
RSA3YLR221C PNP1Q05788 311 aa8.57□□□□□ -1.04
RSA3YLR221C PUN1Q06991 263 aa8.57□□□□□ -1.04
RSA3YLR221C AI1P03875 834 aa8.56□□□□□ -1.04
RSA3YLR221C SEC20P28791 383 aa8.56□□□□□ -1.04
RSA3YLR221C THI72Q08579 599 aa8.56□□□□□ -1.04
RSA3YLR221C YDR461C-AQ2V2P7 80 aa8.56□□□□□ -1.04
RSA3YLR221C ERP5P38819 212 aa8.55□□□□□ -1.04
RSA3YLR221C NTH2P35172 780 aa8.54□□□□□ -1.04
RSA3YLR221C YPQ2Q06328 317 aa8.54□□□□□ -1.04
RSA3YLR221C FUR4P05316 633 aaKnown RBP8.53□□□□□ -1.04
RSA3YLR221C UBP1P25037 809 aa8.53□□□□□ -1.04
RSA3YLR221C CWH41P53008 833 aa8.53□□□□□ -1.04
RSA3YLR221C PSH1Q12161 406 aa8.53□□□□□ -1.04
RSA3YLR221C RPS6AP0CX37 236 aaKnown RBP8.52□□□□□ -1.05
RSA3YLR221C RPS6BP0CX38 236 aaPredicted RBP8.52□□□□□ -1.05
RSA3YLR221C YFL066CP43538 392 aa8.52□□□□□ -1.05
RSA3YLR221C CYT1P07143 309 aa8.51□□□□□ -1.05
RSA3YLR221C PDC6P26263 563 aaKnown RBP8.51□□□□□ -1.05
RSA3YLR221C ATG1P53104 897 aa8.51□□□□□ -1.05
RSA3YLR221C TRL1P09880 827 aaKnown RBP8.5□□□□□ -1.05
RSA3YLR221C ASF1P32447 279 aa8.5□□□□□ -1.05
RSA3YLR221C RRN6P32786 894 aa8.5□□□□□ -1.05
RSA3YLR221C GRS1P38088 690 aaKnown RBP8.5□□□□□ -1.05
RSA3YLR221C LSB3P43603 459 aaKnown RBP8.5□□□□□ -1.05
RSA3YLR221C ALD4P46367 519 aaKnown RBP8.5□□□□□ -1.05
RSA3YLR221C SNU71P53207 620 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms