RNA–Protein interactions for RNA: YLR212C

TUB4, Transcript of Gamma-tubulin, yeast

Gene TUB4, Length 1,422 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUB4	YLR212C	PUS5	Q06244	254 aa		10.99	□□□□□ -0.65
TUB4	YLR212C	ATG20	Q07528	640 aa		10.99	□□□□□ -0.65
TUB4	YLR212C	YDL144C	Q07589	356 aa		10.99	□□□□□ -0.65
TUB4	YLR212C	RTT109	Q07794	436 aa		10.99	□□□□□ -0.65
TUB4	YLR212C	RPS9B	P05755	195 aa	Known RBP	10.98	□□□□□ -0.65
TUB4	YLR212C	SHC1	P39000	512 aa		10.98	□□□□□ -0.65
TUB4	YLR212C	UBP16	Q02863	499 aa		10.98	□□□□□ -0.65
TUB4	YLR212C	HAT1	Q12341	374 aa		10.98	□□□□□ -0.65
TUB4	YLR212C	PMD1	P32634	1753 aa		10.97	□□□□□ -0.65
TUB4	YLR212C	GYP7	P48365	746 aa		10.97	□□□□□ -0.65
TUB4	YLR212C	TPD3	P31383	635 aa		10.96	□□□□□ -0.65
TUB4	YLR212C	GRX6	Q12438	231 aa		10.96	□□□□□ -0.65
TUB4	YLR212C	SSK22	P25390	1331 aa	Predicted RBP	10.96	□□□□□ -0.65
TUB4	YLR212C	RET1	P22276	1149 aa	Known RBP	10.95	□□□□□ -0.66
TUB4	YLR212C	FRD1	P32614	470 aa	Known RBP	10.95	□□□□□ -0.66
TUB4	YLR212C	RPN1	P38764	993 aa	Known RBP	10.95	□□□□□ -0.66
TUB4	YLR212C	SYF1	Q04048	859 aa	Predicted RBP	10.95	□□□□□ -0.66
TUB4	YLR212C	YOL057W	Q08225	711 aa		10.95	□□□□□ -0.66
TUB4	YLR212C	SAS4	Q04003	481 aa		10.94	□□□□□ -0.66
TUB4	YLR212C	THS1	P04801	734 aa	Known RBP	10.93	□□□□□ -0.66
TUB4	YLR212C	PKH1	Q03407	766 aa		10.93	□□□□□ -0.66
TUB4	YLR212C	YLR271W	Q06152	274 aa		10.92	□□□□□ -0.66
TUB4	YLR212C	TOM1	Q03280	3268 aa		10.91	□□□□□ -0.66
TUB4	YLR212C	HEF3	P53978	1044 aa	Known RBP	10.91	□□□□□ -0.66
TUB4	YLR212C	YLR278C	Q05854	1341 aa		10.9	□□□□□ -0.66
TUB4	YLR212C	RTG2	P32608	588 aa	Known RBP	10.9	□□□□□ -0.66
TUB4	YLR212C	DNM1	P54861	757 aa		10.9	□□□□□ -0.66
TUB4	YLR212C	YKR023W	P36119	530 aa	Known RBP	10.89	□□□□□ -0.67
TUB4	YLR212C	SRT1	Q03175	343 aa		10.89	□□□□□ -0.67
TUB4	YLR212C	FCP1	Q03254	732 aa		10.89	□□□□□ -0.67
TUB4	YLR212C	SWI1	P09547	1314 aa		10.88	□□□□□ -0.67
TUB4	YLR212C	DPL1	Q05567	589 aa		10.88	□□□□□ -0.67
TUB4	YLR212C	RIM101	P33400	625 aa		10.86	□□□□□ -0.67
TUB4	YLR212C	NUP133	P36161	1157 aa		10.86	□□□□□ -0.67
TUB4	YLR212C	CST6	P40535	587 aa		10.86	□□□□□ -0.67
TUB4	YLR212C	YDR306C	Q06640	478 aa		10.86	□□□□□ -0.67
TUB4	YLR212C	MRP7	P12687	371 aa		10.85	□□□□□ -0.67
TUB4	YLR212C	GAP1	P19145	602 aa	Predicted RBP	10.85	□□□□□ -0.67
TUB4	YLR212C	MSM1	P22438	575 aa		10.85	□□□□□ -0.67
TUB4	YLR212C	YJR008W	P47085	338 aa		10.85	□□□□□ -0.67
TUB4	YLR212C	FAS2	P19097	1887 aa	Known RBP	10.84	□□□□□ -0.67
TUB4	YLR212C	SUI2	P20459	304 aa	Known RBP	10.84	□□□□□ -0.67
TUB4	YLR212C	FET4	P40988	552 aa		10.84	□□□□□ -0.67
TUB4	YLR212C	SET4	P42948	560 aa		10.84	□□□□□ -0.67
TUB4	YLR212C	VHR2	P40041	505 aa		10.83	□□□□□ -0.68
TUB4	YLR212C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	10.82	□□□□□ -0.68	not detected
TUB4	YLR212C	KRE2	P27809	442 aa		10.82	□□□□□ -0.68
TUB4	YLR212C	GLC3	P32775	704 aa		10.82	□□□□□ -0.68
TUB4	YLR212C	DPH6	Q12429	685 aa		10.82	□□□□□ -0.68
TUB4	YLR212C	RPP0	P05317	312 aa	Known RBP	10.81	□□□□□ -0.68
TUB4	YLR212C	YGL015C	P33199	130 aa		10.81	□□□□□ -0.68
TUB4	YLR212C	ICP55	P40051	511 aa		10.81	□□□□□ -0.68
TUB4	YLR212C	TRP5	P00931	707 aa	Known RBP	10.8	□□□□□ -0.68
TUB4	YLR212C	SET1	P38827	1080 aa	Known RBP	10.8	□□□□□ -0.68
TUB4	YLR212C	ITC1	P53125	1264 aa		10.8	□□□□□ -0.68
TUB4	YLR212C	YGR122W	P53272	402 aa		10.8	□□□□□ -0.68
TUB4	YLR212C	TIM50	Q02776	476 aa		10.8	□□□□□ -0.68
TUB4	YLR212C	GAS5	Q08193	484 aa		10.8	□□□□□ -0.68
TUB4	YLR212C	NOP8	Q08287	484 aa	Predicted RBP	10.8	□□□□□ -0.68
TUB4	YLR212C	AIM7	Q12156	149 aa		10.8	□□□□□ -0.68
TUB4	YLR212C	CDC27	P38042	758 aa		10.79	□□□□□ -0.68
TUB4	YLR212C	TIF4632	P39936	914 aa	Known RBP	10.79	□□□□□ -0.68
TUB4	YLR212C	VPS27	P40343	622 aa	Known RBP	10.79	□□□□□ -0.68
TUB4	YLR212C	TRM44	Q02648	567 aa	Known RBP	10.79	□□□□□ -0.68
TUB4	YLR212C	PSH1	Q12161	406 aa		10.78	□□□□□ -0.68
TUB4	YLR212C	HKR1	P41809	1802 aa		10.78	□□□□□ -0.68
TUB4	YLR212C	AFG2	P32794	780 aa		10.77	□□□□□ -0.68
TUB4	YLR212C	SPL2	P38839	148 aa		10.77	□□□□□ -0.68
TUB4	YLR212C	VPS4	P52917	437 aa		10.77	□□□□□ -0.68
TUB4	YLR212C	RPT4	P53549	437 aa	Known RBP	10.77	□□□□□ -0.68
TUB4	YLR212C	FIG2	P25653	1609 aa		10.77	□□□□□ -0.69
TUB4	YLR212C	SWC3	P31376	625 aa		10.76	□□□□□ -0.69
TUB4	YLR212C	YGR117C	P53270	476 aa		10.76	□□□□□ -0.69
TUB4	YLR212C	UBX2	Q04228	584 aa		10.76	□□□□□ -0.69
TUB4	YLR212C	RRG1	Q12167	365 aa	Predicted RBP	10.76	□□□□□ -0.69
TUB4	YLR212C	SAC3	P46674	1301 aa		10.76	□□□□□ -0.69
TUB4	YLR212C	MGM1	P32266	881 aa		10.75	□□□□□ -0.69
TUB4	YLR212C	RAD24	P32641	659 aa		10.75	□□□□□ -0.69
TUB4	YLR212C	NGR1	P32831	672 aa	Known RBP	10.75	□□□□□ -0.69
TUB4	YLR212C	ETP1	P38748	585 aa	Known RBP	10.75	□□□□□ -0.69
TUB4	YLR212C	YIL089W	P40500	205 aa		10.75	□□□□□ -0.69
TUB4	YLR212C	THI3	Q07471	609 aa		10.75	□□□□□ -0.69
TUB4	YLR212C	STV1	P37296	890 aa		10.75	□□□□□ -0.69
TUB4	YLR212C	EMP47	P43555	445 aa		10.75	□□□□□ -0.69
TUB4	YLR212C	CDC45	Q08032	650 aa		10.75	□□□□□ -0.69
TUB4	YLR212C	PEA2	P40091	420 aa		10.74	□□□□□ -0.69
TUB4	YLR212C	GSM1	P42950	618 aa		10.74	□□□□□ -0.69
TUB4	YLR212C	CRF1	Q04930	467 aa		10.74	□□□□□ -0.69
TUB4	YLR212C	MAK21	Q12176	1025 aa	Known RBP	10.74	□□□□□ -0.69
TUB4	YLR212C	HPR1	P17629	752 aa	Known RBP	10.73	□□□□□ -0.69
TUB4	YLR212C	YPP1	P46951	817 aa		10.73	□□□□□ -0.69
TUB4	YLR212C	DUS1	P53759	423 aa	Known RBP	10.73	□□□□□ -0.69
TUB4	YLR212C	MTC5	Q03897	1148 aa		10.73	□□□□□ -0.69
TUB4	YLR212C	UBP12	P39538	1254 aa		10.72	□□□□□ -0.69
TUB4	YLR212C	SUP35	P05453	685 aa	Known RBP	10.71	□□□□□ -0.69
TUB4	YLR212C	HXT10	P43581	546 aa		10.71	□□□□□ -0.69
TUB4	YLR212C	CSI1	Q04368	295 aa		10.71	□□□□□ -0.69
TUB4	YLR212C	RVB2	Q12464	471 aa	Known RBP	10.71	□□□□□ -0.69
TUB4	YLR212C	CWC15	Q03772	175 aa	Known RBP	10.7	□□□□□ -0.7
TUB4	YLR212C	FLO11	P08640	1367 aa		10.69	□□□□□ -0.7

Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms