RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W MAG2Q06436 670 aaKnown RBP3□□□□□ -1.93
NUP100YKL068W RPS9BP05755 195 aaKnown RBP3□□□□□ -1.93
NUP100YKL068W YAP5P40574 245 aa3□□□□□ -1.93
NUP100YKL068W SPT7P35177 1332 aa3□□□□□ -1.93
NUP100YKL068W SEC8P32855 1065 aa2.99□□□□□ -1.93
NUP100YKL068W TGL4P36165 910 aa2.99□□□□□ -1.93
NUP100YKL068W ZDS1P50111 915 aaKnown RBP2.99□□□□□ -1.93
NUP100YKL068W MSC6Q08818 692 aaKnown RBP2.99□□□□□ -1.93
NUP100YKL068W TIF6Q12522 245 aaKnown RBP2.99□□□□□ -1.93
NUP100YKL068W RGR1P19263 1082 aa2.99□□□□□ -1.93
NUP100YKL068W RRP14P36080 434 aaKnown RBP2.99□□□□□ -1.93
NUP100YKL068W YHL050CP38721 697 aa2.99□□□□□ -1.93
NUP100YKL068W YHR219WP38900 624 aa2.99□□□□□ -1.93
NUP100YKL068W YEL077CQ3E7X8 1277 aa2.99□□□□□ -1.93
NUP100YKL068W ENO2P00925 437 aaKnown RBP2.98□□□□□ -1.93
NUP100YKL068W YDJ1P25491 409 aaKnown RBP2.98□□□□□ -1.93
NUP100YKL068W SRP40P32583 406 aaPredicted RBP2.98□□□□□ -1.93
NUP100YKL068W PMC1P38929 1173 aaPredicted RBP2.98□□□□□ -1.93
NUP100YKL068W ILV3P39522 585 aaKnown RBP2.98□□□□□ -1.93
NUP100YKL068W VAC8P39968 578 aa2.98□□□□□ -1.93
NUP100YKL068W WHI5Q12416 295 aa2.98□□□□□ -1.93
NUP100YKL068W GRE2Q12068 342 aaKnown RBP2.98□□□□□ -1.93
NUP100YKL068W ENT1Q12518 454 aa2.98□□□□□ -1.93
NUP100YKL068W GEA1P47102 1408 aaPredicted RBP2.98□□□□□ -1.93
NUP100YKL068W CIT2P08679 460 aa2.98□□□□□ -1.93
NUP100YKL068W YKL091CP33324 310 aaKnown RBP2.98□□□□□ -1.93
NUP100YKL068W GRS1P38088 690 aaKnown RBP2.98□□□□□ -1.93
NUP100YKL068W KTR7P40504 517 aa2.98□□□□□ -1.93
NUP100YKL068W ECM23Q02710 187 aa2.98□□□□□ -1.93
NUP100YKL068W YOL057WQ08225 711 aa2.98□□□□□ -1.93
NUP100YKL068W SUP45P12385 437 aaKnown RBP2.97□□□□□ -1.93
NUP100YKL068W AIM21P40563 679 aa2.97□□□□□ -1.93
NUP100YKL068W MVP1P40959 511 aaKnown RBP2.97□□□□□ -1.93
NUP100YKL068W TEA1P47988 759 aa2.97□□□□□ -1.93
NUP100YKL068W ALG12P53730 551 aa2.97□□□□□ -1.93
NUP100YKL068W PKH3Q03306 898 aaPredicted RBP2.97□□□□□ -1.93
NUP100YKL068W SVF1Q05515 481 aa2.97□□□□□ -1.93
NUP100YKL068W RAD59Q12223 238 aa2.97□□□□□ -1.93
NUP100YKL068W STB3Q12427 513 aa2.97□□□□□ -1.93
NUP100YKL068W SEC7P11075 2009 aaKnown RBP2.97□□□□□ -1.93
NUP100YKL068W IOC3P43596 787 aa2.97□□□□□ -1.93
NUP100YKL068W CLA4P48562 842 aa2.97□□□□□ -1.93
NUP100YKL068W MPH3P0CE00 602 aa2.96□□□□□ -1.94
NUP100YKL068W MET1P36150 593 aa2.96□□□□□ -1.94
NUP100YKL068W ATH1P48016 1211 aa2.96□□□□□ -1.94
NUP100YKL068W ALD3P54114 506 aa2.96□□□□□ -1.94
NUP100YKL068W KAR5Q04746 504 aa2.96□□□□□ -1.94
NUP100YKL068W MRX10Q05648 414 aa2.96□□□□□ -1.94
NUP100YKL068W AI4P03878 556 aa2.96□□□□□ -1.94
NUP100YKL068W SSB1P11484 613 aaKnown RBP2.96□□□□□ -1.94
NUP100YKL068W RPA135P22138 1203 aaKnown RBP2.96□□□□□ -1.94
NUP100YKL068W ESS1P22696 170 aa2.96□□□□□ -1.94
NUP100YKL068W SCJ1P25303 377 aa2.96□□□□□ -1.94
NUP100YKL068W TPS3P38426 1054 aaKnown RBP2.96□□□□□ -1.94
NUP100YKL068W FPR3P38911 411 aaKnown RBP2.96□□□□□ -1.94
NUP100YKL068W SSB2P40150 613 aaKnown RBP2.96□□□□□ -1.94
NUP100YKL068W TFG1P41895 735 aaPredicted RBP2.96□□□□□ -1.94
NUP100YKL068W SIT4P20604 311 aa2.95□□□□□ -1.94
NUP100YKL068W KIC1P38692 1080 aa2.95□□□□□ -1.94
NUP100YKL068W RSC30P38781 883 aa2.95□□□□□ -1.94
NUP100YKL068W NAB3P38996 802 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
NUP100YKL068W TPM2P40414 161 aa2.95□□□□□ -1.94
NUP100YKL068W MDJ2P42834 146 aa2.95□□□□□ -1.94
NUP100YKL068W ALD6P54115 500 aaKnown RBP2.95□□□□□ -1.94
NUP100YKL068W RAD54P32863 898 aa2.95□□□□□ -1.94
NUP100YKL068W UBX7P38349 436 aa2.95□□□□□ -1.94
NUP100YKL068W NIS1P53939 407 aa2.95□□□□□ -1.94
NUP100YKL068W TRL1P09880 827 aaKnown RBP2.94□□□□□ -1.94
NUP100YKL068W MAK16P10962 306 aaPredicted RBP2.94□□□□□ -1.94
NUP100YKL068W YJU3P28321 313 aa2.94□□□□□ -1.94
NUP100YKL068W KIP3P53086 805 aaKnown RBP2.94□□□□□ -1.94
NUP100YKL068W HST2P53686 357 aa2.94□□□□□ -1.94
NUP100YKL068W GAL11P19659 1081 aa2.94□□□□□ -1.94
NUP100YKL068W CSE4P36012 229 aa2.94□□□□□ -1.94
NUP100YKL068W RIM21P48565 533 aa2.94□□□□□ -1.94
NUP100YKL068W ECM16Q04217 1267 aaKnown RBP2.94□□□□□ -1.94
NUP100YKL068W ARG8P18544 423 aa2.94□□□□□ -1.94
NUP100YKL068W SIS2P36024 562 aa2.94□□□□□ -1.94
NUP100YKL068W FPK1P53739 893 aa2.94□□□□□ -1.94
NUP100YKL068W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
NUP100YKL068W GYP5Q12344 894 aa2.94□□□□□ -1.94
NUP100YKL068W GRX4P32642 244 aa2.93□□□□□ -1.94
NUP100YKL068W SLI15P38283 698 aa2.93□□□□□ -1.94
NUP100YKL068W KRI1P42846 591 aaKnown RBP2.93□□□□□ -1.94
NUP100YKL068W POB3Q04636 552 aaKnown RBP2.93□□□□□ -1.94
NUP100YKL068W FYV10P40492 516 aa2.93□□□□□ -1.94
NUP100YKL068W MNL2Q12205 849 aa2.93□□□□□ -1.94
NUP100YKL068W MMP1Q12372 583 aa2.93□□□□□ -1.94
NUP100YKL068W MGE1P38523 228 aa2.92□□□□□ -1.94
NUP100YKL068W PPX1P38698 397 aa2.92□□□□□ -1.94
NUP100YKL068W YDL121CQ07541 149 aa2.92□□□□□ -1.94
NUP100YKL068W SAP155P43612 1002 aa2.92□□□□□ -1.94
NUP100YKL068W YJR142WP47173 342 aa2.92□□□□□ -1.94
NUP100YKL068W YOL036WQ08206 761 aa2.92□□□□□ -1.94
NUP100YKL068W CDC53Q12018 815 aaKnown RBP2.92□□□□□ -1.94
NUP100YKL068W PEP12P32854 288 aa2.91□□□□□ -1.94
NUP100YKL068W MPE1P35728 441 aaKnown RBP2.91□□□□□ -1.94
NUP100YKL068W PBP2P38151 413 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
NUP100YKL068W YJR107WP47145 328 aa2.91□□□□□ -1.94
NUP100YKL068W DAN4P47179 1161 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms