RNA–Protein interactions for RNA: YIR028W

DAL4, Transcript of Allantoin permease, yeast

Gene DAL4, Length 1,908 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DAL4	YIR028W	RKM4	Q12504	494 aa		7.37	□□□□□ -1.23
DAL4	YIR028W	FOB1	O13329	566 aa		7.37	□□□□□ -1.23
DAL4	YIR028W	HMG1	P12683	1054 aa		7.37	□□□□□ -1.23
DAL4	YIR028W	IME2	P32581	645 aa		7.37	□□□□□ -1.23
DAL4	YIR028W	MEF2	P39677	819 aa		7.37	□□□□□ -1.23
DAL4	YIR028W	BRR1	Q99177	341 aa	Predicted RBP	7.37	□□□□□ -1.23
DAL4	YIR028W	MER1	P16523	270 aa		7.36	□□□□□ -1.23
DAL4	YIR028W	RPB4	P20433	221 aa	Predicted RBP	7.36	□□□□□ -1.23
DAL4	YIR028W	EFM2	P38347	419 aa		7.36	□□□□□ -1.23
DAL4	YIR028W	MXR1	P40029	184 aa		7.36	□□□□□ -1.23
DAL4	YIR028W	RAD26	P40352	1085 aa		7.36	□□□□□ -1.23
DAL4	YIR028W	YNL050C	P53952	270 aa		7.36	□□□□□ -1.23
DAL4	YIR028W	PNG1	Q02890	363 aa		7.36	□□□□□ -1.23
DAL4	YIR028W	SMD2	Q06217	110 aa	Known RBP	7.36	□□□□□ -1.23
DAL4	YIR028W	KEX2	P13134	814 aa		7.35	□□□□□ -1.23
DAL4	YIR028W	SMY1	P32364	656 aa	Known RBP	7.35	□□□□□ -1.23
DAL4	YIR028W	PEP12	P32854	288 aa		7.35	□□□□□ -1.23
DAL4	YIR028W	COY1	P34237	679 aa		7.35	□□□□□ -1.23
DAL4	YIR028W	ATG19	P35193	415 aa		7.35	□□□□□ -1.23
DAL4	YIR028W	SDS3	P40505	327 aa		7.35	□□□□□ -1.23
DAL4	YIR028W	RTF1	P53064	558 aa		7.35	□□□□□ -1.23
DAL4	YIR028W	BTN2	P53286	410 aa		7.35	□□□□□ -1.23
DAL4	YIR028W	LSO1	Q3E827	93 aa		7.35	□□□□□ -1.23
DAL4	YIR028W	KAR3	P17119	729 aa		7.35	□□□□□ -1.23
DAL4	YIR028W	REB1	P21538	810 aa		7.35	□□□□□ -1.23
DAL4	YIR028W	PSO2	P30620	661 aa		7.35	□□□□□ -1.23
DAL4	YIR028W	RKM3	P38222	552 aa		7.35	□□□□□ -1.23
DAL4	YIR028W	GLO3	P38682	493 aa	Known RBP	7.35	□□□□□ -1.23
DAL4	YIR028W	RRP8	P38961	392 aa	Known RBP	7.35	□□□□□ -1.23
DAL4	YIR028W	PMT7	Q06644	662 aa		7.35	□□□□□ -1.23
DAL4	YIR028W	UTP4	Q06679	776 aa	Known RBP	7.35	□□□□□ -1.23
DAL4	YIR028W	GUA1	P38625	525 aa	Known RBP	7.34	□□□□□ -1.23
DAL4	YIR028W	ARB1	P40024	610 aa	Known RBP	7.34	□□□□□ -1.23
DAL4	YIR028W	DOT6	P40059	670 aa	Known RBP	7.34	□□□□□ -1.23
DAL4	YIR028W	DSN1	P40568	576 aa		7.34	□□□□□ -1.23
DAL4	YIR028W	RAD17	P48581	401 aa		7.34	□□□□□ -1.23
DAL4	YIR028W	ALG12	P53730	551 aa		7.34	□□□□□ -1.23
DAL4	YIR028W	HPC2	Q01448	625 aa		7.34	□□□□□ -1.23
DAL4	YIR028W	MRD1	Q06106	887 aa	Known RBP	7.34	□□□□□ -1.23
DAL4	YIR028W	BMS1	Q08965	1183 aa	Known RBP	7.34	□□□□□ -1.23
DAL4	YIR028W	SGS1	P35187	1447 aa		7.34	□□□□□ -1.23
DAL4	YIR028W	HOM3	P10869	527 aa		7.33	□□□□□ -1.24
DAL4	YIR028W	CDC3	P32457	520 aa	Known RBP	7.33	□□□□□ -1.24
DAL4	YIR028W	OTU2	P38747	307 aa	Known RBP	7.33	□□□□□ -1.24
DAL4	YIR028W	HEH2	Q03281	663 aa		7.33	□□□□□ -1.24
DAL4	YIR028W	POB3	Q04636	552 aa	Known RBP	7.33	□□□□□ -1.24
DAL4	YIR028W	RNH1	Q04740	348 aa		7.33	□□□□□ -1.24
DAL4	YIR028W	ORM2	Q06144	216 aa		7.33	□□□□□ -1.24
DAL4	YIR028W	PKC1	P24583	1151 aa		7.33	□□□□□ -1.24
DAL4	YIR028W	YER034W	P40022	185 aa	Known RBP	7.33	□□□□□ -1.24
DAL4	YIR028W	MAM1	P40065	302 aa		7.33	□□□□□ -1.24
DAL4	YIR028W	IRR1	P40541	1150 aa		7.33	□□□□□ -1.24
DAL4	YIR028W	YNR021W	P53723	404 aa	Known RBP	7.33	□□□□□ -1.24
DAL4	YIR028W	SPS1	P08458	490 aa		7.32	□□□□□ -1.24
DAL4	YIR028W	PET123	P17558	318 aa		7.32	□□□□□ -1.24
DAL4	YIR028W	HNM1	P19807	563 aa		7.32	□□□□□ -1.24
DAL4	YIR028W	KRR1	P25586	316 aa	Predicted RBP	7.32	□□□□□ -1.24
DAL4	YIR028W	BUD14	P27637	709 aa		7.32	□□□□□ -1.24
DAL4	YIR028W	HSE1	P38753	452 aa		7.32	□□□□□ -1.24
DAL4	YIR028W	CHZ1	P40019	153 aa	Predicted RBP	7.32	□□□□□ -1.24
DAL4	YIR028W	PAP2	P53632	584 aa	Known RBP	7.32	□□□□□ -1.24
DAL4	YIR028W	SPP382	Q06411	708 aa	Predicted RBP	7.32	□□□□□ -1.24
DAL4	YIR028W	MPC54	Q08550	464 aa		7.32	□□□□□ -1.24
DAL4	YIR028W	SSK22	P25390	1331 aa	Predicted RBP	7.32	□□□□□ -1.24
DAL4	YIR028W	MRPL25	P23369	157 aa		7.31	□□□□□ -1.24
DAL4	YIR028W	HIR2	P32480	875 aa		7.31	□□□□□ -1.24
DAL4	YIR028W	MRE11	P32829	692 aa		7.31	□□□□□ -1.24
DAL4	YIR028W	APE4	P38821	490 aa		7.31	□□□□□ -1.24
DAL4	YIR028W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	7.31	□□□□□ -1.24	not detected
DAL4	YIR028W	UTP18	P40362	594 aa	Predicted RBP	7.31	□□□□□ -1.24
DAL4	YIR028W	RPL34A	P87262	121 aa	Predicted RBP	7.31	□□□□□ -1.24
DAL4	YIR028W	YML119W	Q03208	357 aa		7.31	□□□□□ -1.24
DAL4	YIR028W	VMS1	Q04311	632 aa	Known RBP	7.31	□□□□□ -1.24
DAL4	YIR028W	KAR5	Q04746	504 aa		7.31	□□□□□ -1.24
DAL4	YIR028W	YDR338C	Q05497	695 aa		7.31	□□□□□ -1.24
DAL4	YIR028W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	7.31	□□□□□ -1.24	not detected
DAL4	YIR028W	AAD3	P25612	363 aa		7.31	□□□□□ -1.24
DAL4	YIR028W	BEM4	P39011	633 aa		7.31	□□□□□ -1.24
DAL4	YIR028W	SET2	P46995	733 aa	Known RBP	7.31	□□□□□ -1.24
DAL4	YIR028W	SNZ1	Q03148	297 aa		7.31	□□□□□ -1.24
DAL4	YIR028W	DPS1	P04802	557 aa	Known RBP	7.3	□□□□□ -1.24
DAL4	YIR028W	SPT5	P27692	1063 aa	Known RBP	7.3	□□□□□ -1.24
DAL4	YIR028W	DLD1	P32891	587 aa		7.3	□□□□□ -1.24
DAL4	YIR028W	EXO84	P38261	753 aa		7.3	□□□□□ -1.24
DAL4	YIR028W	YLF2	P38746	405 aa		7.3	□□□□□ -1.24
DAL4	YIR028W	SWD1	P39706	426 aa		7.3	□□□□□ -1.24
DAL4	YIR028W	ACE2	P21192	770 aa		7.29	□□□□□ -1.24
DAL4	YIR028W	VPH1	P32563	840 aa	Known RBP	7.29	□□□□□ -1.24
DAL4	YIR028W	JNM1	P36224	373 aa		7.29	□□□□□ -1.24
DAL4	YIR028W	YGR016W	P53209	190 aa		7.29	□□□□□ -1.24
DAL4	YIR028W	CWC21	Q03375	135 aa	Known RBP	7.29	□□□□□ -1.24
DAL4	YIR028W	DBP9	Q06218	594 aa	Known RBP	7.29	□□□□□ -1.24
DAL4	YIR028W	CIT2	P08679	460 aa		7.29	□□□□□ -1.24
DAL4	YIR028W	ACP1	P32463	125 aa		7.29	□□□□□ -1.24
DAL4	YIR028W	YAP1801	P38856	637 aa		7.29	□□□□□ -1.24
DAL4	YIR028W	RTT105	P40063	208 aa		7.29	□□□□□ -1.24
DAL4	YIR028W	ACF4	P47129	309 aa		7.29	□□□□□ -1.24
DAL4	YIR028W	HOP2	P53187	214 aa		7.29	□□□□□ -1.24
DAL4	YIR028W	CSR1	Q06705	408 aa	Known RBP	7.29	□□□□□ -1.24
DAL4	YIR028W	MDM38	Q08179	573 aa		7.29	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms