RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C AAP1P37898 856 aaKnown RBP3.64□□□□□ -1.83
NMD2YHR077C AIM9P40053 627 aaKnown RBP3.64□□□□□ -1.83
NMD2YHR077C EPS1P40557 701 aa3.64□□□□□ -1.83
NMD2YHR077C TEA1P47988 759 aa3.64□□□□□ -1.83
NMD2YHR077C HGH1P48362 394 aaKnown RBP3.64□□□□□ -1.83
NMD2YHR077C MRPS35P53292 345 aa3.64□□□□□ -1.83
NMD2YHR077C ALO1P54783 526 aaKnown RBP3.64□□□□□ -1.83
NMD2YHR077C DNM1P54861 757 aa3.64□□□□□ -1.83
NMD2YHR077C RFC1P38630 861 aaKnown RBP3.64□□□□□ -1.83
NMD2YHR077C NMD2P38798 1089 aaKnown RBP3.64□□□□□ -1.83
NMD2YHR077C BDP1P46678 594 aa3.64□□□□□ -1.83
NMD2YHR077C HAP5Q02516 242 aa3.64□□□□□ -1.83
NMD2YHR077C ECM23Q02710 187 aa3.64□□□□□ -1.83
NMD2YHR077C UBP16Q02863 499 aa3.64□□□□□ -1.83
NMD2YHR077C FCP1Q03254 732 aa3.64□□□□□ -1.83
NMD2YHR077C NOT3P06102 836 aaKnown RBP3.63□□□□□ -1.83
NMD2YHR077C YLR271WQ06152 274 aa3.63□□□□□ -1.83
NMD2YHR077C ECM21P38167 1117 aaKnown RBP3.63□□□□□ -1.83
NMD2YHR077C CIR1P42940 261 aa3.63□□□□□ -1.83
NMD2YHR077C ECM16Q04217 1267 aaKnown RBP3.63□□□□□ -1.83
NMD2YHR077C SRS2P12954 1174 aa3.62□□□□□ -1.83
NMD2YHR077C YKL133CP36066 463 aa3.62□□□□□ -1.83
NMD2YHR077C NUP133P36161 1157 aa3.62□□□□□ -1.83
NMD2YHR077C COBP00163 385 aa3.62□□□□□ -1.83
NMD2YHR077C AI2P03876 854 aa3.62□□□□□ -1.83
NMD2YHR077C MEC3Q02574 474 aa3.62□□□□□ -1.83
NMD2YHR077C RIM20Q12033 661 aa3.62□□□□□ -1.83
NMD2YHR077C SLA1P32790 1244 aa3.62□□□□□ -1.83
NMD2YHR077C HRQ1Q05549 1077 aa3.62□□□□□ -1.83
NMD2YHR077C LEO1P38439 464 aa3.61□□□□□ -1.83
NMD2YHR077C BDH2P39713 417 aa3.61□□□□□ -1.83
NMD2YHR077C ITC1P53125 1264 aa3.61□□□□□ -1.83
NMD2YHR077C NOP53Q12080 455 aaKnown RBP3.61□□□□□ -1.83
NMD2YHR077C GSC2P40989 1895 aa3.61□□□□□ -1.83
NMD2YHR077C VPS24P36095 224 aaKnown RBP3.61□□□□□ -1.83
NMD2YHR077C YGL242CP53066 181 aa3.61□□□□□ -1.83
NMD2YHR077C RMT2Q03305 412 aa3.61□□□□□ -1.83
NMD2YHR077C PHM7Q12252 991 aa3.61□□□□□ -1.83
NMD2YHR077C SSK22P25390 1331 aaPredicted RBP3.6□□□□□ -1.83
NMD2YHR077C NPR2P39923 615 aa3.6□□□□□ -1.83
NMD2YHR077C VPS20Q04272 221 aa3.6□□□□□ -1.83
NMD2YHR077C IMH1Q06704 911 aaKnown RBP3.6□□□□□ -1.83
NMD2YHR077C ADR1P07248 1323 aa3.6□□□□□ -1.83
NMD2YHR077C LAM4P38800 1345 aa3.6□□□□□ -1.83
NMD2YHR077C SAC3P46674 1301 aa3.6□□□□□ -1.83
NMD2YHR077C YBP2P53169 641 aa3.6□□□□□ -1.83
NMD2YHR077C PKH3Q03306 898 aaPredicted RBP3.6□□□□□ -1.83
NMD2YHR077C HYR1P40581 163 aaKnown RBP3.59□□□□□ -1.83
NMD2YHR077C MTC5Q03897 1148 aa3.59□□□□□ -1.83
NMD2YHR077C NYV1Q12255 253 aa3.59□□□□□ -1.83
NMD2YHR077C FLO1P32768 1537 aa3.59□□□□□ -1.83
NMD2YHR077C GLO3P38682 493 aaKnown RBP3.59□□□□□ -1.83
NMD2YHR077C RPN7Q06103 429 aaKnown RBP3.59□□□□□ -1.83
NMD2YHR077C SSP2Q08646 371 aa3.59□□□□□ -1.83
NMD2YHR077C GYP5Q12344 894 aa3.59□□□□□ -1.83
NMD2YHR077C SEC18P18759 758 aaKnown RBP3.59□□□□□ -1.84
NMD2YHR077C HAL5P38970 855 aaKnown RBP3.59□□□□□ -1.84
NMD2YHR077C RMD1Q03441 430 aa3.59□□□□□ -1.84
NMD2YHR077C VPS64Q03944 604 aa3.59□□□□□ -1.84
NMD2YHR077C YFR006WP43590 535 aa3.58□□□□□ -1.84
NMD2YHR077C FAP1P53971 965 aa3.58□□□□□ -1.84
NMD2YHR077C ATG13Q06628 738 aa3.58□□□□□ -1.84
NMD2YHR077C VAS1P07806 1104 aaKnown RBP3.58□□□□□ -1.84
NMD2YHR077C GRX1P25373 110 aaKnown RBP3.58□□□□□ -1.84
NMD2YHR077C KTR1P27810 393 aaKnown RBP3.58□□□□□ -1.84
NMD2YHR077C SSF1P38789 453 aaPredicted RBP3.58□□□□□ -1.84
NMD2YHR077C EAF7P53911 425 aaKnown RBP3.58□□□□□ -1.84
NMD2YHR077C NOP8Q08287 484 aaPredicted RBP3.58□□□□□ -1.84
NMD2YHR077C MYO1P08964 1928 aa3.58□□□□□ -1.84
NMD2YHR077C RKM3P38222 552 aa3.57□□□□□ -1.84
NMD2YHR077C SSP1P38871 571 aa3.57□□□□□ -1.84
NMD2YHR077C BBC1P47068 1157 aa3.57□□□□□ -1.84
NMD2YHR077C PDR18P53756 1333 aa3.57□□□□□ -1.84
NMD2YHR077C KAR5Q04746 504 aa3.57□□□□□ -1.84
NMD2YHR077C BRE1Q07457 700 aaKnown RBP3.57□□□□□ -1.84
NMD2YHR077C PRI1P10363 409 aa3.57□□□□□ -1.84
NMD2YHR077C ARL1P38116 183 aaKnown RBP3.57□□□□□ -1.84
NMD2YHR077C MLC1P53141 149 aa3.57□□□□□ -1.84
NMD2YHR077C GRE2Q12068 342 aaKnown RBP3.57□□□□□ -1.84
NMD2YHR077C PSH1Q12161 406 aa3.57□□□□□ -1.84
NMD2YHR077C RNR2P09938 399 aaKnown RBP3.57□□□□□ -1.84
NMD2YHR077C FRS2P15625 503 aaKnown RBP3.57□□□□□ -1.84
NMD2YHR077C RIM101P33400 625 aa3.57□□□□□ -1.84
NMD2YHR077C HST1P53685 503 aa3.57□□□□□ -1.84
NMD2YHR077C YNL193WP53870 558 aa3.57□□□□□ -1.84
NMD2YHR077C YPL150WQ12152 901 aa3.57□□□□□ -1.84
NMD2YHR077C PGA3Q12746 312 aaKnown RBP3.57□□□□□ -1.84
NMD2YHR077C SPT21P35209 758 aa3.56□□□□□ -1.84
NMD2YHR077C YLR407WQ06070 228 aa3.56□□□□□ -1.84
NMD2YHR077C POM152P39685 1337 aa3.56□□□□□ -1.84
NMD2YHR077C RVS167P39743 482 aaKnown RBP3.56□□□□□ -1.84
NMD2YHR077C YGL082WP53155 381 aa3.56□□□□□ -1.84
NMD2YHR077C PIL1P53252 339 aaKnown RBP3.56□□□□□ -1.84
NMD2YHR077C SSL2Q00578 843 aa3.56□□□□□ -1.84
NMD2YHR077C ELM1P32801 640 aa3.55□□□□□ -1.84
NMD2YHR077C AIM44Q99299 758 aa3.55□□□□□ -1.84
NMD2YHR077C YIL055CP40523 627 aaKnown RBP3.55□□□□□ -1.84
NMD2YHR077C CTH1P47976 325 aa3.55□□□□□ -1.84
NMD2YHR077C RPN12P32496 274 aa3.55□□□□□ -1.84
NMD2YHR077C CTF18P49956 741 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms