RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C DPL1Q05567 589 aa9.42□□□□□ -0.9
PUP2YGR253C AIM7Q12156 149 aa9.42□□□□□ -0.9
PUP2YGR253C RRP46P53256 223 aaPredicted RBP9.41□□□□□ -0.9
PUP2YGR253C YNL050CP53952 270 aa9.41□□□□□ -0.9
PUP2YGR253C YPR204WQ08995 1032 aa9.41□□□□□ -0.9
PUP2YGR253C HAT1Q12341 374 aa9.41□□□□□ -0.9
PUP2YGR253C GLC3P32775 704 aa9.4□□□□□ -0.9
PUP2YGR253C YIL089WP40500 205 aa9.4□□□□□ -0.9
PUP2YGR253C VPS64Q03944 604 aa9.4□□□□□ -0.9
PUP2YGR253C POM152P39685 1337 aa9.39□□□□□ -0.91
PUP2YGR253C TIM50Q02776 476 aa9.39□□□□□ -0.91
PUP2YGR253C TOM1Q03280 3268 aa9.39□□□□□ -0.91
PUP2YGR253C SSK22P25390 1331 aaPredicted RBP9.38□□□□□ -0.91
PUP2YGR253C ZDS2P54786 942 aa9.38□□□□□ -0.91
PUP2YGR253C TRM44Q02648 567 aaKnown RBP9.36□□□□□ -0.91
PUP2YGR253C FIG2P25653 1609 aa9.35□□□□□ -0.91
PUP2YGR253C PEA2P40091 420 aa9.35□□□□□ -0.91
PUP2YGR253C ZDS1P50111 915 aaKnown RBP9.35□□□□□ -0.91
PUP2YGR253C LYS2P07702 1392 aa9.35□□□□□ -0.91
PUP2YGR253C EMP47P43555 445 aa9.34□□□□□ -0.91
PUP2YGR253C COQ4O13525 335 aa9.33□□□□□ -0.92
PUP2YGR253C YGL015CP33199 130 aa9.33□□□□□ -0.92
PUP2YGR253C YBR287WP38355 427 aa9.33□□□□□ -0.92
PUP2YGR253C TIF4632P39936 914 aaKnown RBP9.33□□□□□ -0.92
PUP2YGR253C RTR1P40084 226 aaPredicted RBP9.33□□□□□ -0.92
PUP2YGR253C VPS4P52917 437 aa9.33□□□□□ -0.92
PUP2YGR253C YGR117CP53270 476 aa9.33□□□□□ -0.92
PUP2YGR253C BMS1Q08965 1183 aaKnown RBP9.33□□□□□ -0.92
PUP2YGR253C HKR1P41809 1802 aa9.33□□□□□ -0.92
PUP2YGR253C PRD1P25375 712 aa9.32□□□□□ -0.92
PUP2YGR253C SET4P42948 560 aa9.32□□□□□ -0.92
PUP2YGR253C PKH1Q03407 766 aa9.32□□□□□ -0.92
PUP2YGR253C CWC15Q03772 175 aaKnown RBP9.32□□□□□ -0.92
PUP2YGR253C SDH2P21801 266 aa9.31□□□□□ -0.92
PUP2YGR253C AFG2P32794 780 aa9.31□□□□□ -0.92
PUP2YGR253C MAM1P40065 302 aa9.31□□□□□ -0.92
PUP2YGR253C HPR1P17629 752 aaKnown RBP9.3□□□□□ -0.92
PUP2YGR253C NSR1P27476 414 aaKnown RBP RIP-Chip data9.3□□□□□ -0.92not detected
PUP2YGR253C YLR271WQ06152 274 aa9.3□□□□□ -0.92
PUP2YGR253C GAS5Q08193 484 aa9.3□□□□□ -0.92
PUP2YGR253C TYW1Q08960 810 aaKnown RBP9.3□□□□□ -0.92
PUP2YGR253C RRG1Q12167 365 aaPredicted RBP9.3□□□□□ -0.92
PUP2YGR253C TIF6Q12522 245 aaKnown RBP9.3□□□□□ -0.92
PUP2YGR253C STV1P37296 890 aa9.29□□□□□ -0.92
PUP2YGR253C PSD2P53037 1138 aaKnown RBP9.29□□□□□ -0.92
PUP2YGR253C CRF1Q04930 467 aa9.29□□□□□ -0.92
PUP2YGR253C SRF1Q12516 437 aa9.29□□□□□ -0.92
PUP2YGR253C FCP1Q03254 732 aa9.28□□□□□ -0.92
PUP2YGR253C YOL057WQ08225 711 aa9.28□□□□□ -0.92
PUP2YGR253C DPH6Q12429 685 aa9.28□□□□□ -0.92
PUP2YGR253C TRP5P00931 707 aaKnown RBP9.27□□□□□ -0.93
PUP2YGR253C KRE2P27809 442 aa9.27□□□□□ -0.93
PUP2YGR253C ICP55P40051 511 aa9.27□□□□□ -0.93
PUP2YGR253C BSD2P38356 321 aa9.26□□□□□ -0.93
PUP2YGR253C DNM1P54861 757 aa9.26□□□□□ -0.93
PUP2YGR253C UBX2Q04228 584 aa9.26□□□□□ -0.93
PUP2YGR253C HVG1P0CE11 249 aa9.25□□□□□ -0.93
PUP2YGR253C GSM1P42950 618 aa9.25□□□□□ -0.93
PUP2YGR253C RPT4P53549 437 aaKnown RBP9.25□□□□□ -0.93
PUP2YGR253C SEN54Q02825 467 aaPredicted RBP9.25□□□□□ -0.93
PUP2YGR253C PNT1P38969 423 aa9.24□□□□□ -0.93
PUP2YGR253C GYP7P48365 746 aa9.24□□□□□ -0.93
PUP2YGR253C THI22Q06490 572 aa9.24□□□□□ -0.93
PUP2YGR253C CSR2Q12734 1121 aa9.24□□□□□ -0.93
PUP2YGR253C SWI1P09547 1314 aa9.24□□□□□ -0.93
PUP2YGR253C RTT109Q07794 436 aa9.23□□□□□ -0.93
PUP2YGR253C CBP1P07252 654 aa9.22□□□□□ -0.93
PUP2YGR253C CST6P40535 587 aa9.22□□□□□ -0.93
PUP2YGR253C NCS6P53088 359 aa9.22□□□□□ -0.93
PUP2YGR253C MGM1P32266 881 aa9.21□□□□□ -0.94
PUP2YGR253C MAC1P35192 417 aa9.21□□□□□ -0.94
PUP2YGR253C SPL2P38839 148 aa9.21□□□□□ -0.94
PUP2YGR253C MPP10P47083 593 aaKnown RBP9.21□□□□□ -0.94
PUP2YGR253C RRT6P53117 311 aaPredicted RBP9.21□□□□□ -0.94
PUP2YGR253C IOC4Q04213 475 aa9.21□□□□□ -0.94
PUP2YGR253C NGR1P32831 672 aaKnown RBP9.2□□□□□ -0.94
PUP2YGR253C NUP133P36161 1157 aa9.2□□□□□ -0.94
PUP2YGR253C PCS60P38137 543 aaKnown RBP RIP-Chip data9.2□□□□□ -0.94not detected
PUP2YGR253C PRP42Q03776 544 aaKnown RBP9.2□□□□□ -0.94
PUP2YGR253C CST9Q06032 482 aa9.2□□□□□ -0.94
PUP2YGR253C YDR306CQ06640 478 aa9.2□□□□□ -0.94
PUP2YGR253C FLO11P08640 1367 aa9.2□□□□□ -0.94
PUP2YGR253C YJR008WP47085 338 aa9.19□□□□□ -0.94
PUP2YGR253C ITC1P53125 1264 aa9.19□□□□□ -0.94
PUP2YGR253C THI3Q07471 609 aa9.19□□□□□ -0.94
PUP2YGR253C PIB1Q06651 286 aa9.18□□□□□ -0.94
PUP2YGR253C PSH1Q12161 406 aa9.18□□□□□ -0.94
PUP2YGR253C MRP7P12687 371 aa9.17□□□□□ -0.94
PUP2YGR253C SRT1Q03175 343 aa9.17□□□□□ -0.94
PUP2YGR253C TOS4Q06266 489 aa9.17□□□□□ -0.94
PUP2YGR253C TPD3P31383 635 aa9.16□□□□□ -0.94
PUP2YGR253C MOT2P34909 587 aaKnown RBP9.16□□□□□ -0.94
PUP2YGR253C APE3P37302 537 aaKnown RBP9.16□□□□□ -0.94
PUP2YGR253C RSC30P38781 883 aa9.16□□□□□ -0.94
PUP2YGR253C SET1P38827 1080 aaKnown RBP9.16□□□□□ -0.94
PUP2YGR253C GSC2P40989 1895 aa9.15□□□□□ -0.94
PUP2YGR253C SAC3P46674 1301 aa9.15□□□□□ -0.94
PUP2YGR253C RPS7AP26786 190 aaKnown RBP9.15□□□□□ -0.94
PUP2YGR253C UTP7P40055 554 aaKnown RBP9.15□□□□□ -0.94
PUP2YGR253C IRC4Q03036 179 aa9.15□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms