RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene SLD5, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD5YDR489W MSN5P52918 1224 aa5.56□□□□□ -1.52
SLD5YDR489W YJL007CP47080 104 aa5.55□□□□□ -1.52
SLD5YDR489W YNR014WP53719 212 aa5.54□□□□□ -1.52
SLD5YDR489W STE20Q03497 939 aaKnown RBP5.54□□□□□ -1.52
SLD5YDR489W WTM2Q12206 467 aa5.54□□□□□ -1.52
SLD5YDR489W TY1A-DR3Q12441 440 aa5.54□□□□□ -1.52
SLD5YDR489W SUP45P12385 437 aaKnown RBP5.53□□□□□ -1.52
SLD5YDR489W SPT5P27692 1063 aaKnown RBP5.53□□□□□ -1.52
SLD5YDR489W MCX1P38323 520 aaPredicted RBP5.53□□□□□ -1.52
SLD5YDR489W FRA1Q07825 749 aa5.53□□□□□ -1.52
SLD5YDR489W TIF1P10081 395 aaKnown RBP5.52□□□□□ -1.53
SLD5YDR489W YCK2P23292 546 aaKnown RBP5.51□□□□□ -1.53
SLD5YDR489W NAF1P53919 492 aaKnown RBP5.51□□□□□ -1.53
SLD5YDR489W DAT1P13483 248 aaKnown RBP5.5□□□□□ -1.53
SLD5YDR489W AHP1P38013 176 aaKnown RBP5.5□□□□□ -1.53
SLD5YDR489W YNL108CP53929 270 aa5.49□□□□□ -1.53
SLD5YDR489W ENO2P00925 437 aaKnown RBP5.48□□□□□ -1.53
SLD5YDR489W GPM1P00950 247 aaKnown RBP5.48□□□□□ -1.53
SLD5YDR489W SPT2P06843 333 aaPredicted RBP5.48□□□□□ -1.53
SLD5YDR489W YDJ1P25491 409 aaKnown RBP5.48□□□□□ -1.53
SLD5YDR489W BOI2P39969 1040 aa5.48□□□□□ -1.53
SLD5YDR489W RIM21P48565 533 aa5.48□□□□□ -1.53
SLD5YDR489W MRX10Q05648 414 aa5.48□□□□□ -1.53
SLD5YDR489W ISR1Q06098 443 aaKnown RBP5.48□□□□□ -1.53
SLD5YDR489W UTR2P32623 467 aa5.47□□□□□ -1.53
SLD5YDR489W FPS1P23900 669 aa5.46□□□□□ -1.54
SLD5YDR489W TTI1P36097 1038 aa5.46□□□□□ -1.54
SLD5YDR489W AMN1P38285 549 aaPredicted RBP5.46□□□□□ -1.54
SLD5YDR489W SLN1P39928 1220 aaPredicted RBP5.46□□□□□ -1.54
SLD5YDR489W UTP7P40055 554 aaKnown RBP5.46□□□□□ -1.54
SLD5YDR489W RPL34BP40525 121 aaKnown RBP5.46□□□□□ -1.54
SLD5YDR489W YDR215CQ12240 137 aa5.46□□□□□ -1.54
SLD5YDR489W ALA1P40825 983 aaKnown RBP5.45□□□□□ -1.54
SLD5YDR489W MCM16Q12262 181 aa5.45□□□□□ -1.54
SLD5YDR489W ENO1P00924 437 aaKnown RBP5.44□□□□□ -1.54
SLD5YDR489W ISF1P32488 338 aa5.44□□□□□ -1.54
SLD5YDR489W RTG2P32608 588 aaKnown RBP5.44□□□□□ -1.54
SLD5YDR489W TBS1P38114 1094 aa5.44□□□□□ -1.54
SLD5YDR489W MRX12P47084 519 aa5.44□□□□□ -1.54
SLD5YDR489W RDS2P19541 446 aaKnown RBP5.43□□□□□ -1.54
SLD5YDR489W IRE1P32361 1115 aa5.43□□□□□ -1.54
SLD5YDR489W MET1P36150 593 aa5.43□□□□□ -1.54
SLD5YDR489W LSB6P42951 607 aa5.43□□□□□ -1.54
SLD5YDR489W EMP47P43555 445 aa5.43□□□□□ -1.54
SLD5YDR489W APL6P46682 809 aa5.43□□□□□ -1.54
SLD5YDR489W SUB2Q07478 446 aaKnown RBP5.43□□□□□ -1.54
SLD5YDR489W MCA1Q08601 432 aa5.43□□□□□ -1.54
SLD5YDR489W PEP12P32854 288 aa5.42□□□□□ -1.54
SLD5YDR489W SUM1P46676 1062 aa5.42□□□□□ -1.54
SLD5YDR489W YPP1P46951 817 aa5.42□□□□□ -1.54
SLD5YDR489W JJJ2P46997 583 aa5.42□□□□□ -1.54
SLD5YDR489W MRPL16P38064 232 aa5.41□□□□□ -1.54
SLD5YDR489W SIS2P36024 562 aa5.4□□□□□ -1.54
SLD5YDR489W TAT1P38085 619 aa5.4□□□□□ -1.54
SLD5YDR489W HAL5P38970 855 aaKnown RBP5.4□□□□□ -1.54
SLD5YDR489W SSA4P22202 642 aaKnown RBP5.39□□□□□ -1.55
SLD5YDR489W CPS1P27614 576 aa5.39□□□□□ -1.55
SLD5YDR489W KNS1P32350 737 aaPredicted RBP5.39□□□□□ -1.55
SLD5YDR489W SHM1P37292 490 aaPredicted RBP5.39□□□□□ -1.55
SLD5YDR489W PDC5P16467 563 aaKnown RBP5.38□□□□□ -1.55
SLD5YDR489W PUP1P25043 261 aa5.37□□□□□ -1.55
SLD5YDR489W MAC1P35192 417 aa5.37□□□□□ -1.55
SLD5YDR489W SLX8P40072 274 aa5.37□□□□□ -1.55
SLD5YDR489W NOB1Q08444 459 aaKnown RBP5.37□□□□□ -1.55
SLD5YDR489W PSH1Q12161 406 aa5.37□□□□□ -1.55
SLD5YDR489W STB3Q12427 513 aa5.37□□□□□ -1.55
SLD5YDR489W SSA1P10591 642 aaKnown RBP5.36□□□□□ -1.55
SLD5YDR489W PDC6P26263 563 aaKnown RBP5.36□□□□□ -1.55
SLD5YDR489W ATG3P40344 310 aa5.35□□□□□ -1.55
SLD5YDR489W SPR3P41901 512 aa5.35□□□□□ -1.55
SLD5YDR489W PRY1P47032 299 aa5.35□□□□□ -1.55
SLD5YDR489W TGL4P36165 910 aa5.34□□□□□ -1.55
SLD5YDR489W SOH1P38633 127 aa5.34□□□□□ -1.55
SLD5YDR489W TY1A-DR2Q03964 440 aaKnown RBP5.34□□□□□ -1.55
SLD5YDR489W UTP13Q05946 817 aaKnown RBP5.34□□□□□ -1.55
SLD5YDR489W HDA3Q06623 655 aa5.34□□□□□ -1.55
SLD5YDR489W GEF1P37020 779 aa5.33□□□□□ -1.56
SLD5YDR489W YPL034WQ03083 165 aa5.33□□□□□ -1.56
SLD5YDR489W YML083CQ04526 418 aa5.33□□□□□ -1.56
SLD5YDR489W RPS31P05759 152 aaKnown RBP5.31□□□□□ -1.56
SLD5YDR489W ALO1P54783 526 aaKnown RBP5.31□□□□□ -1.56
SLD5YDR489W GAL2P13181 574 aa5.29□□□□□ -1.56
SLD5YDR489W KTR7P40504 517 aa5.29□□□□□ -1.56
SLD5YDR489W MSC7P38694 644 aa5.28□□□□□ -1.56
SLD5YDR489W LEU1P07264 779 aaKnown RBP5.27□□□□□ -1.57
SLD5YDR489W PHO87P25360 923 aa5.27□□□□□ -1.57
SLD5YDR489W YPQ2Q06328 317 aa5.27□□□□□ -1.57
SLD5YDR489W OMA1P36163 345 aa5.26□□□□□ -1.57
SLD5YDR489W TPS3P38426 1054 aaKnown RBP5.26□□□□□ -1.57
SLD5YDR489W IRC24P40580 263 aa5.26□□□□□ -1.57
SLD5YDR489W INP52P50942 1183 aa5.26□□□□□ -1.57
SLD5YDR489W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
SLD5YDR489W RPP1AP05318 106 aaPredicted RBP5.25□□□□□ -1.57
SLD5YDR489W SWI5P08153 709 aa5.25□□□□□ -1.57
SLD5YDR489W ALD2P47771 506 aa5.25□□□□□ -1.57
SLD5YDR489W ACS2P52910 683 aaKnown RBP5.25□□□□□ -1.57
SLD5YDR489W NOP8Q08287 484 aaPredicted RBP5.25□□□□□ -1.57
SLD5YDR489W ROM1P53046 1155 aa5.24□□□□□ -1.57
SLD5YDR489W BUD9P53226 547 aa5.24□□□□□ -1.57
SLD5YDR489W ECM23Q02710 187 aa5.24□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 36.8 ms