RNA–Protein interactions for RNA: YDR421W

ARO80, Transcript of Zinc finger transcriptional activator of the Zn2Cys6 family, yeast

Gene ARO80, Length 2,853 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ARO80	YDR421W	TEA1	P47988	759 aa		4.94	□□□□□ -1.62
ARO80	YDR421W	KIN4	Q01919	800 aa		4.94	□□□□□ -1.62
ARO80	YDR421W	MSN5	P52918	1224 aa		4.94	□□□□□ -1.62
ARO80	YDR421W	PAP2	P53632	584 aa	Known RBP	4.94	□□□□□ -1.62
ARO80	YDR421W	SSF1	P38789	453 aa	Predicted RBP	4.93	□□□□□ -1.62
ARO80	YDR421W	TUM1	Q08686	304 aa	Known RBP	4.93	□□□□□ -1.62
ARO80	YDR421W	YLR278C	Q05854	1341 aa		4.92	□□□□□ -1.62
ARO80	YDR421W	BDF2	Q07442	638 aa		4.92	□□□□□ -1.62
ARO80	YDR421W	SUP35	P05453	685 aa	Known RBP	4.92	□□□□□ -1.62
ARO80	YDR421W	MRP7	P12687	371 aa		4.92	□□□□□ -1.62
ARO80	YDR421W	PEX21	P50091	288 aa		4.92	□□□□□ -1.62
ARO80	YDR421W	SRT1	Q03175	343 aa		4.92	□□□□□ -1.62
ARO80	YDR421W	YDL144C	Q07589	356 aa		4.92	□□□□□ -1.62
ARO80	YDR421W	RTT109	Q07794	436 aa		4.92	□□□□□ -1.62
ARO80	YDR421W	ALE1	Q08548	619 aa		4.92	□□□□□ -1.62
ARO80	YDR421W	BMS1	Q08965	1183 aa	Known RBP	4.91	□□□□□ -1.62
ARO80	YDR421W	FLO1	P32768	1537 aa		4.91	□□□□□ -1.62
ARO80	YDR421W	SUI2	P20459	304 aa	Known RBP	4.9	□□□□□ -1.62
ARO80	YDR421W	PIF1	P07271	859 aa		4.9	□□□□□ -1.62
ARO80	YDR421W	PUS5	Q06244	254 aa		4.9	□□□□□ -1.62
ARO80	YDR421W	BOI2	P39969	1040 aa		4.9	□□□□□ -1.63
ARO80	YDR421W	DIP2	Q12220	943 aa	Predicted RBP	4.9	□□□□□ -1.63
ARO80	YDR421W	PDR18	P53756	1333 aa		4.89	□□□□□ -1.63
ARO80	YDR421W	DCD1	P06773	312 aa		4.89	□□□□□ -1.63
ARO80	YDR421W	ECM16	Q04217	1267 aa	Known RBP	4.89	□□□□□ -1.63
ARO80	YDR421W	ATG20	Q07528	640 aa		4.89	□□□□□ -1.63
ARO80	YDR421W	HPC2	Q01448	625 aa		4.89	□□□□□ -1.63
ARO80	YDR421W	GLC3	P32775	704 aa		4.88	□□□□□ -1.63
ARO80	YDR421W	DPH6	Q12429	685 aa		4.88	□□□□□ -1.63
ARO80	YDR421W	ORC1	P54784	914 aa	Predicted RBP	4.88	□□□□□ -1.63
ARO80	YDR421W	RIX7	Q07844	837 aa	Known RBP	4.88	□□□□□ -1.63
ARO80	YDR421W	OSH3	P38713	996 aa	Known RBP	4.87	□□□□□ -1.63
ARO80	YDR421W	MPP10	P47083	593 aa	Known RBP	4.87	□□□□□ -1.63
ARO80	YDR421W	CRF1	Q04930	467 aa		4.87	□□□□□ -1.63
ARO80	YDR421W	CYB2	P00175	591 aa		4.87	□□□□□ -1.63
ARO80	YDR421W	RTG2	P32608	588 aa	Known RBP	4.87	□□□□□ -1.63
ARO80	YDR421W	IRC3	Q06683	689 aa		4.87	□□□□□ -1.63
ARO80	YDR421W	UBP12	P39538	1254 aa		4.86	□□□□□ -1.63
ARO80	YDR421W	EAF6	P47128	113 aa		4.86	□□□□□ -1.63
ARO80	YDR421W	TIM50	Q02776	476 aa		4.86	□□□□□ -1.63
ARO80	YDR421W	PRS1	P32895	427 aa	Known RBP	4.86	□□□□□ -1.63
ARO80	YDR421W	YJL171C	P46992	396 aa		4.86	□□□□□ -1.63
ARO80	YDR421W	ICP55	P40051	511 aa		4.86	□□□□□ -1.63
ARO80	YDR421W	YIL092W	P40497	633 aa		4.86	□□□□□ -1.63
ARO80	YDR421W	ITC1	P53125	1264 aa		4.86	□□□□□ -1.63
ARO80	YDR421W	TPD3	P31383	635 aa		4.85	□□□□□ -1.63
ARO80	YDR421W	SMY1	P32364	656 aa	Known RBP	4.85	□□□□□ -1.63
ARO80	YDR421W	TIF4632	P39936	914 aa	Known RBP	4.85	□□□□□ -1.63
ARO80	YDR421W	MSH4	P40965	878 aa	Predicted RBP	4.85	□□□□□ -1.63
ARO80	YDR421W	ACK1	Q07622	623 aa	Predicted RBP	4.85	□□□□□ -1.63
ARO80	YDR421W	FKS1	P38631	1876 aa	Known RBP	4.85	□□□□□ -1.63
ARO80	YDR421W	CDC16	P09798	840 aa		4.84	□□□□□ -1.63
ARO80	YDR421W	DPL1	Q05567	589 aa		4.84	□□□□□ -1.63
ARO80	YDR421W	KRE2	P27809	442 aa		4.83	□□□□□ -1.64
ARO80	YDR421W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
ARO80	YDR421W	TFA1	P36100	482 aa		4.83	□□□□□ -1.64
ARO80	YDR421W	GYP5	Q12344	894 aa		4.83	□□□□□ -1.64
ARO80	YDR421W	SRF1	Q12516	437 aa		4.83	□□□□□ -1.64
ARO80	YDR421W	MYO1	P08964	1928 aa		4.83	□□□□□ -1.64
ARO80	YDR421W	YKU70	P32807	602 aa		4.83	□□□□□ -1.64
ARO80	YDR421W	RVB2	Q12464	471 aa	Known RBP	4.83	□□□□□ -1.64
ARO80	YDR421W	TRP5	P00931	707 aa	Known RBP	4.82	□□□□□ -1.64
ARO80	YDR421W	RAD2	P07276	1031 aa		4.82	□□□□□ -1.64
ARO80	YDR421W	RET1	P22276	1149 aa	Known RBP	4.82	□□□□□ -1.64
ARO80	YDR421W	PSH1	Q12161	406 aa		4.82	□□□□□ -1.64
ARO80	YDR421W	RRG1	Q12167	365 aa	Predicted RBP	4.82	□□□□□ -1.64
ARO80	YDR421W	RRT6	P53117	311 aa	Predicted RBP	4.81	□□□□□ -1.64
ARO80	YDR421W	MSM1	P22438	575 aa		4.81	□□□□□ -1.64
ARO80	YDR421W	SER1	P33330	395 aa	Known RBP	4.81	□□□□□ -1.64
ARO80	YDR421W	WRS1	Q12109	432 aa	Known RBP	4.81	□□□□□ -1.64
ARO80	YDR421W	GAL2	P13181	574 aa		4.8	□□□□□ -1.64
ARO80	YDR421W	DIT2	P21595	489 aa		4.8	□□□□□ -1.64
ARO80	YDR421W	RAD24	P32641	659 aa		4.8	□□□□□ -1.64
ARO80	YDR421W	GLO3	P38682	493 aa	Known RBP	4.8	□□□□□ -1.64
ARO80	YDR421W	UTP7	P40055	554 aa	Known RBP	4.8	□□□□□ -1.64
ARO80	YDR421W	NOP2	P40991	618 aa	Known RBP	4.8	□□□□□ -1.64
ARO80	YDR421W	CWH41	P53008	833 aa		4.8	□□□□□ -1.64
ARO80	YDR421W	ARG82	P07250	355 aa		4.8	□□□□□ -1.64
ARO80	YDR421W	APL2	P36000	726 aa	Predicted RBP	4.8	□□□□□ -1.64
ARO80	YDR421W	EMP47	P43555	445 aa		4.8	□□□□□ -1.64
ARO80	YDR421W	RAD50	P12753	1312 aa		4.8	□□□□□ -1.64
ARO80	YDR421W	IOC3	P43596	787 aa		4.79	□□□□□ -1.64
ARO80	YDR421W	NOP8	Q08287	484 aa	Predicted RBP	4.79	□□□□□ -1.64
ARO80	YDR421W	OPI1	P21957	404 aa		4.79	□□□□□ -1.64
ARO80	YDR421W	BSD2	P38356	321 aa		4.79	□□□□□ -1.64
ARO80	YDR421W	YGR117C	P53270	476 aa		4.79	□□□□□ -1.64
ARO80	YDR421W	CSI1	Q04368	295 aa		4.79	□□□□□ -1.64
ARO80	YDR421W	LCB1	P25045	558 aa	Known RBP	4.79	□□□□□ -1.64
ARO80	YDR421W	SAS4	Q04003	481 aa		4.79	□□□□□ -1.64
ARO80	YDR421W	PCL8	Q08966	492 aa		4.79	□□□□□ -1.64
ARO80	YDR421W	SNF3	P10870	884 aa		4.78	□□□□□ -1.64
ARO80	YDR421W	MGM1	P32266	881 aa		4.78	□□□□□ -1.64
ARO80	YDR421W	NUP133	P36161	1157 aa		4.78	□□□□□ -1.64
ARO80	YDR421W	SPL2	P38839	148 aa		4.78	□□□□□ -1.64
ARO80	YDR421W	MLC1	P53141	149 aa		4.78	□□□□□ -1.64
ARO80	YDR421W	RIF1	P29539	1916 aa		4.78	□□□□□ -1.64
ARO80	YDR421W	MPH3	P0CE00	602 aa		4.78	□□□□□ -1.64
ARO80	YDR421W	ETP1	P38748	585 aa	Known RBP	4.78	□□□□□ -1.64
ARO80	YDR421W	YGL082W	P53155	381 aa		4.78	□□□□□ -1.64
ARO80	YDR421W	CLF1	Q12309	687 aa	Predicted RBP	4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 1042 ms