RNA–Protein interactions for RNA: YDR418W

RPL12B, Transcript of Ribosomal 60S subunit protein L12B, yeast

Gene RPL12B, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL12B	YDR418W	VPS13	Q07878	3144 aa		10.37	□□□□□ -0.75
RPL12B	YDR418W	ALE1	Q08548	619 aa		10.36	□□□□□ -0.75
RPL12B	YDR418W	FRD1	P32614	470 aa	Known RBP	10.35	□□□□□ -0.75
RPL12B	YDR418W	AOS1	Q06624	347 aa		10.35	□□□□□ -0.75
RPL12B	YDR418W	HVG1	P0CE11	249 aa		10.34	□□□□□ -0.75
RPL12B	YDR418W	YGR117C	P53270	476 aa		10.34	□□□□□ -0.75
RPL12B	YDR418W	KCC4	P25389	1037 aa		10.33	□□□□□ -0.76
RPL12B	YDR418W	MAL31	P38156	614 aa		10.33	□□□□□ -0.76
RPL12B	YDR418W	VPS4	P52917	437 aa		10.33	□□□□□ -0.76
RPL12B	YDR418W	SSP2	Q08646	371 aa		10.33	□□□□□ -0.76
RPL12B	YDR418W	HPR1	P17629	752 aa	Known RBP	10.32	□□□□□ -0.76
RPL12B	YDR418W	TIF4632	P39936	914 aa	Known RBP	10.32	□□□□□ -0.76
RPL12B	YDR418W	CSR2	Q12734	1121 aa		10.32	□□□□□ -0.76
RPL12B	YDR418W	RSC30	P38781	883 aa		10.31	□□□□□ -0.76
RPL12B	YDR418W	PAP2	P53632	584 aa	Known RBP	10.31	□□□□□ -0.76
RPL12B	YDR418W	CST9	Q06032	482 aa		10.31	□□□□□ -0.76
RPL12B	YDR418W	YPR117W	Q06116	2489 aa		10.3	□□□□□ -0.76
RPL12B	YDR418W	UBP16	Q02863	499 aa		10.3	□□□□□ -0.76
RPL12B	YDR418W	AKL1	P38080	1108 aa	Known RBP	10.29	□□□□□ -0.76
RPL12B	YDR418W	SYF1	Q04048	859 aa	Predicted RBP	10.29	□□□□□ -0.76
RPL12B	YDR418W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	10.27	□□□□□ -0.77	RIP-Chip
RPL12B	YDR418W	RRT6	P53117	311 aa	Predicted RBP	10.27	□□□□□ -0.77
RPL12B	YDR418W	SEN54	Q02825	467 aa	Predicted RBP	10.27	□□□□□ -0.77
RPL12B	YDR418W	CRF1	Q04930	467 aa		10.27	□□□□□ -0.77
RPL12B	YDR418W	HKR1	P41809	1802 aa		10.26	□□□□□ -0.77
RPL12B	YDR418W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	10.26	□□□□□ -0.77	not detected
RPL12B	YDR418W	PNT1	P38969	423 aa		10.26	□□□□□ -0.77
RPL12B	YDR418W	TAO3	P40468	2376 aa		10.26	□□□□□ -0.77
RPL12B	YDR418W	AFG2	P32794	780 aa		10.25	□□□□□ -0.77
RPL12B	YDR418W	STV1	P37296	890 aa		10.25	□□□□□ -0.77
RPL12B	YDR418W	APE3	P37302	537 aa	Known RBP	10.25	□□□□□ -0.77
RPL12B	YDR418W	HAT1	Q12341	374 aa		10.25	□□□□□ -0.77
RPL12B	YDR418W	GSC2	P40989	1895 aa		10.23	□□□□□ -0.77
RPL12B	YDR418W	MOT2	P34909	587 aa	Known RBP	10.23	□□□□□ -0.77
RPL12B	YDR418W	ISW2	Q08773	1120 aa		10.23	□□□□□ -0.77
RPL12B	YDR418W	RRG1	Q12167	365 aa	Predicted RBP	10.23	□□□□□ -0.77
RPL12B	YDR418W	ARG8	P18544	423 aa		10.21	□□□□□ -0.77
RPL12B	YDR418W	DCD1	P06773	312 aa		10.2	□□□□□ -0.78
RPL12B	YDR418W	SET4	P42948	560 aa		10.2	□□□□□ -0.78
RPL12B	YDR418W	CBP1	P07252	654 aa		10.19	□□□□□ -0.78
RPL12B	YDR418W	APL2	P36000	726 aa	Predicted RBP	10.19	□□□□□ -0.78
RPL12B	YDR418W	YVH1	Q02256	364 aa	Known RBP	10.19	□□□□□ -0.78
RPL12B	YDR418W	RBA50	Q04418	439 aa		10.19	□□□□□ -0.78
RPL12B	YDR418W	SSK22	P25390	1331 aa	Predicted RBP	10.18	□□□□□ -0.78
RPL12B	YDR418W	FBP1	P09201	348 aa		10.18	□□□□□ -0.78
RPL12B	YDR418W	NTH2	P35172	780 aa		10.18	□□□□□ -0.78
RPL12B	YDR418W	GAS5	Q08193	484 aa		10.18	□□□□□ -0.78
RPL12B	YDR418W	UGA3	P26370	528 aa		10.17	□□□□□ -0.78
RPL12B	YDR418W	VPS64	Q03944	604 aa		10.17	□□□□□ -0.78
RPL12B	YDR418W	SGD1	Q06132	899 aa		10.17	□□□□□ -0.78
RPL12B	YDR418W	JIP4	Q03361	876 aa		10.16	□□□□□ -0.78
RPL12B	YDR418W	NSE3	Q05541	303 aa		10.16	□□□□□ -0.78
RPL12B	YDR418W	GSM1	P42950	618 aa		10.15	□□□□□ -0.78
RPL12B	YDR418W	YPR204W	Q08995	1032 aa		10.14	□□□□□ -0.79
RPL12B	YDR418W	PAH1	P32567	862 aa		10.13	□□□□□ -0.79
RPL12B	YDR418W	UBX2	Q04228	584 aa		10.13	□□□□□ -0.79
RPL12B	YDR418W	PKH1	Q03407	766 aa		10.12	□□□□□ -0.79
RPL12B	YDR418W	LYS2	P07702	1392 aa		10.12	□□□□□ -0.79
RPL12B	YDR418W	KRE2	P27809	442 aa		10.11	□□□□□ -0.79
RPL12B	YDR418W	HAA1	Q12753	694 aa	Known RBP	10.11	□□□□□ -0.79
RPL12B	YDR418W	TRP5	P00931	707 aa	Known RBP	10.1	□□□□□ -0.79
RPL12B	YDR418W	ASH1	P34233	588 aa		10.1	□□□□□ -0.79
RPL12B	YDR418W	YLR225C	Q05948	407 aa	Known RBP	10.1	□□□□□ -0.79
RPL12B	YDR418W	DPH6	Q12429	685 aa		10.1	□□□□□ -0.79
RPL12B	YDR418W	PDS5	Q04264	1277 aa		10.09	□□□□□ -0.79
RPL12B	YDR418W	GAL2	P13181	574 aa		10.08	□□□□□ -0.8
RPL12B	YDR418W	YCK3	P39962	524 aa		10.08	□□□□□ -0.8
RPL12B	YDR418W	SPR3	P41901	512 aa		10.07	□□□□□ -0.8
RPL12B	YDR418W	RPT4	P53549	437 aa	Known RBP	10.07	□□□□□ -0.8
RPL12B	YDR418W	CLA4	P48562	842 aa		10.06	□□□□□ -0.8
RPL12B	YDR418W	ZDS2	P54786	942 aa		10.06	□□□□□ -0.8
RPL12B	YDR418W	PRP42	Q03776	544 aa	Known RBP	10.06	□□□□□ -0.8
RPL12B	YDR418W	FLO11	P08640	1367 aa		10.05	□□□□□ -0.8
RPL12B	YDR418W	ICP55	P40051	511 aa		10.05	□□□□□ -0.8
RPL12B	YDR418W	NIT1	P40447	199 aa		10.05	□□□□□ -0.8
RPL12B	YDR418W	PSD2	P53037	1138 aa	Known RBP	10.05	□□□□□ -0.8
RPL12B	YDR418W	ULP1	Q02724	621 aa		10.05	□□□□□ -0.8
RPL12B	YDR418W	PSF2	P40359	213 aa		10.04	□□□□□ -0.8
RPL12B	YDR418W	TRK1	P12685	1235 aa		10.02	□□□□□ -0.81
RPL12B	YDR418W	POL5	P39985	1022 aa	Known RBP	10.02	□□□□□ -0.81
RPL12B	YDR418W	YNL050C	P53952	270 aa		10.02	□□□□□ -0.81
RPL12B	YDR418W	YLR271W	Q06152	274 aa		10.02	□□□□□ -0.81
RPL12B	YDR418W	EAR1	Q03212	550 aa		10.01	□□□□□ -0.81
RPL12B	YDR418W	FCP1	Q03254	732 aa		10.01	□□□□□ -0.81
RPL12B	YDR418W	PEX29	Q03370	554 aa		10.01	□□□□□ -0.81
RPL12B	YDR418W	GIN4	Q12263	1142 aa		10.01	□□□□□ -0.81
RPL12B	YDR418W	RPS7A	P26786	190 aa	Known RBP	10	□□□□□ -0.81
RPL12B	YDR418W	DLD1	P32891	587 aa		9.99	□□□□□ -0.81
RPL12B	YDR418W	SPL2	P38839	148 aa		9.99	□□□□□ -0.81
RPL12B	YDR418W	UTP7	P40055	554 aa	Known RBP	9.99	□□□□□ -0.81
RPL12B	YDR418W	MTC3	P53077	123 aa		9.99	□□□□□ -0.81
RPL12B	YDR418W	MGM1	P32266	881 aa		9.98	□□□□□ -0.81
RPL12B	YDR418W	LDH1	P38139	375 aa		9.98	□□□□□ -0.81
RPL12B	YDR418W	ZDS1	P50111	915 aa	Known RBP	9.98	□□□□□ -0.81
RPL12B	YDR418W	ACK1	Q07622	623 aa	Predicted RBP	9.98	□□□□□ -0.81
RPL12B	YDR418W	NGR1	P32831	672 aa	Known RBP	9.97	□□□□□ -0.81
RPL12B	YDR418W	VPS62	P53285	467 aa		9.97	□□□□□ -0.81
RPL12B	YDR418W	THI3	Q07471	609 aa		9.97	□□□□□ -0.81
RPL12B	YDR418W	YMR084W	A2P2R3	262 aa		9.96	□□□□□ -0.82
RPL12B	YDR418W	ARG82	P07250	355 aa		9.96	□□□□□ -0.82

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms