RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C BRE2P43132 505 aa3.12□□□□□ -1.91
SWI5YDR146C PUF6Q04373 656 aaKnown RBP3.12□□□□□ -1.91
SWI5YDR146C CYT1P07143 309 aa3.11□□□□□ -1.91
SWI5YDR146C ARG82P07250 355 aa3.11□□□□□ -1.91
SWI5YDR146C NGR1P32831 672 aaKnown RBP3.11□□□□□ -1.91
SWI5YDR146C TBS1P38114 1094 aa3.11□□□□□ -1.91
SWI5YDR146C SUM1P46676 1062 aa3.11□□□□□ -1.91
SWI5YDR146C VTC4P47075 721 aa3.11□□□□□ -1.91
SWI5YDR146C SSN3P39073 555 aa3.11□□□□□ -1.91
SWI5YDR146C NUP85P46673 744 aa3.11□□□□□ -1.91
SWI5YDR146C YJR098CP47139 656 aa3.11□□□□□ -1.91
SWI5YDR146C DAT1P13483 248 aaKnown RBP3.1□□□□□ -1.91
SWI5YDR146C HXT5P38695 592 aa3.1□□□□□ -1.91
SWI5YDR146C MSN5P52918 1224 aa3.1□□□□□ -1.91
SWI5YDR146C VAN1P23642 535 aa3.1□□□□□ -1.91
SWI5YDR146C CDC3P32457 520 aaKnown RBP3.1□□□□□ -1.91
SWI5YDR146C SLA1P32790 1244 aa3.1□□□□□ -1.91
SWI5YDR146C DLD3P39976 496 aaKnown RBP3.1□□□□□ -1.91
SWI5YDR146C UTP7P40055 554 aaKnown RBP3.1□□□□□ -1.91
SWI5YDR146C RPL34AP87262 121 aaPredicted RBP3.1□□□□□ -1.91
SWI5YDR146C CAB1Q04430 367 aa3.1□□□□□ -1.91
SWI5YDR146C TY1A-DR3Q12441 440 aa3.1□□□□□ -1.91
SWI5YDR146C TRS33Q99394 268 aa3.1□□□□□ -1.91
SWI5YDR146C SRS2P12954 1174 aa3.09□□□□□ -1.91
SWI5YDR146C DAL1P32375 460 aa3.09□□□□□ -1.91
SWI5YDR146C DLD1P32891 587 aa3.09□□□□□ -1.91
SWI5YDR146C SHM1P37292 490 aaPredicted RBP3.09□□□□□ -1.91
SWI5YDR146C ALD4P46367 519 aaKnown RBP3.09□□□□□ -1.91
SWI5YDR146C RPS31P05759 152 aaKnown RBP3.08□□□□□ -1.92
SWI5YDR146C YNL165WP53891 406 aa3.08□□□□□ -1.92
SWI5YDR146C PNP1Q05788 311 aa3.08□□□□□ -1.92
SWI5YDR146C NOP8Q08287 484 aaPredicted RBP3.08□□□□□ -1.92
SWI5YDR146C GAR1P28007 205 aaKnown RBP3.08□□□□□ -1.92
SWI5YDR146C BOL3P39724 118 aa3.08□□□□□ -1.92
SWI5YDR146C JJJ2P46997 583 aa3.08□□□□□ -1.92
SWI5YDR146C KTR2P33550 425 aa3.07□□□□□ -1.92
SWI5YDR146C GLY1P37303 387 aaKnown RBP3.07□□□□□ -1.92
SWI5YDR146C SSF1P38789 453 aaPredicted RBP3.07□□□□□ -1.92
SWI5YDR146C LSC2P53312 427 aa3.07□□□□□ -1.92
SWI5YDR146C GCR2Q01722 534 aa3.07□□□□□ -1.92
SWI5YDR146C OPT2Q06593 877 aa3.07□□□□□ -1.92
SWI5YDR146C UTP4Q06679 776 aaKnown RBP3.07□□□□□ -1.92
SWI5YDR146C SRF1Q12516 437 aa3.07□□□□□ -1.92
SWI5YDR146C BOI1P38041 980 aaKnown RBP3.07□□□□□ -1.92
SWI5YDR146C YBR197CP38306 217 aa3.07□□□□□ -1.92
SWI5YDR146C PUN1Q06991 263 aa3.07□□□□□ -1.92
SWI5YDR146C TCB1Q12466 1186 aa3.07□□□□□ -1.92
SWI5YDR146C CDC19P00549 500 aaKnown RBP3.06□□□□□ -1.92
SWI5YDR146C TRL1P09880 827 aaKnown RBP3.06□□□□□ -1.92
SWI5YDR146C MET22P32179 357 aa3.06□□□□□ -1.92
SWI5YDR146C SCD5P34758 872 aa3.06□□□□□ -1.92
SWI5YDR146C LCB5Q06147 687 aaKnown RBP3.06□□□□□ -1.92
SWI5YDR146C APC11Q12157 165 aa3.06□□□□□ -1.92
SWI5YDR146C TY1A-BLQ12266 440 aa3.06□□□□□ -1.92
SWI5YDR146C LSO1Q3E827 93 aa3.06□□□□□ -1.92
SWI5YDR146C ATG1P53104 897 aa3.05□□□□□ -1.92
SWI5YDR146C YML020WQ03722 664 aa3.05□□□□□ -1.92
SWI5YDR146C PSH1Q12161 406 aa3.05□□□□□ -1.92
SWI5YDR146C MRPL33P20084 86 aa3.05□□□□□ -1.92
SWI5YDR146C PDC6P26263 563 aaKnown RBP3.05□□□□□ -1.92
SWI5YDR146C MLF3P32047 452 aa3.05□□□□□ -1.92
SWI5YDR146C ALD2P47771 506 aa3.05□□□□□ -1.92
SWI5YDR146C CWH41P53008 833 aa3.05□□□□□ -1.92
SWI5YDR146C HAT1Q12341 374 aa3.05□□□□□ -1.92
SWI5YDR146C LEU1P07264 779 aaKnown RBP3.04□□□□□ -1.92
SWI5YDR146C IRE1P32361 1115 aa3.04□□□□□ -1.92
SWI5YDR146C ISC10P32645 267 aa3.04□□□□□ -1.92
SWI5YDR146C UBP15P50101 1230 aa3.04□□□□□ -1.92
SWI5YDR146C UBP2Q01476 1272 aa3.04□□□□□ -1.92
SWI5YDR146C KAR5Q04746 504 aa3.04□□□□□ -1.92
SWI5YDR146C AHP1P38013 176 aaKnown RBP3.04□□□□□ -1.92
SWI5YDR146C OSH7P38755 437 aa3.04□□□□□ -1.92
SWI5YDR146C ERP5P38819 212 aa3.04□□□□□ -1.92
SWI5YDR146C NAM8Q00539 523 aaKnown RBP3.04□□□□□ -1.92
SWI5YDR146C FOX2Q02207 900 aaKnown RBP3.04□□□□□ -1.92
SWI5YDR146C SEN54Q02825 467 aaPredicted RBP3.04□□□□□ -1.92
SWI5YDR146C YDR444WQ04093 687 aa3.04□□□□□ -1.92
SWI5YDR146C YBL113CQ7M4S9 792 aa3.04□□□□□ -1.92
SWI5YDR146C Q0182Q9ZZW1 134 aa3.04□□□□□ -1.92
SWI5YDR146C CCP1P00431 361 aa3.03□□□□□ -1.92
SWI5YDR146C RPC31P17890 251 aa3.03□□□□□ -1.92
SWI5YDR146C ACO2P39533 789 aa3.03□□□□□ -1.92
SWI5YDR146C ALA1P40825 983 aaKnown RBP3.03□□□□□ -1.92
SWI5YDR146C MDJ2P42834 146 aa3.03□□□□□ -1.92
SWI5YDR146C YLR346CQ06139 101 aa3.03□□□□□ -1.92
SWI5YDR146C FUR4P05316 633 aaKnown RBP3.02□□□□□ -1.93
SWI5YDR146C RPB10P22139 70 aa3.02□□□□□ -1.93
SWI5YDR146C VMA3P25515 160 aa3.02□□□□□ -1.93
SWI5YDR146C SCW11P53189 542 aa3.02□□□□□ -1.93
SWI5YDR146C YDL176WQ12027 708 aa3.02□□□□□ -1.93
SWI5YDR146C RRN6P32786 894 aa3.02□□□□□ -1.93
SWI5YDR146C ACF4P47129 309 aa3.02□□□□□ -1.93
SWI5YDR146C SKP1P52286 194 aa3.02□□□□□ -1.93
SWI5YDR146C TY1A-MR1Q04215 440 aa3.02□□□□□ -1.93
SWI5YDR146C QDR1P40475 563 aa3.01□□□□□ -1.93
SWI5YDR146C ROG3P43602 733 aa3.01□□□□□ -1.93
SWI5YDR146C GLO3P38682 493 aaKnown RBP3.01□□□□□ -1.93
SWI5YDR146C QDR2P40474 542 aa3.01□□□□□ -1.93
SWI5YDR146C FRT1Q99332 602 aa3.01□□□□□ -1.93
SWI5YDR146C RGP1P16664 663 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms