RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W GRE2Q12068 342 aaKnown RBP11.53□□□□□ -0.56
SED1YDR077W ARG8P18544 423 aa11.52□□□□□ -0.57
SED1YDR077W LPD1P09624 499 aaKnown RBP11.51□□□□□ -0.57
SED1YDR077W SER1P33330 395 aaKnown RBP11.51□□□□□ -0.57
SED1YDR077W SET1P38827 1080 aaKnown RBP11.51□□□□□ -0.57
SED1YDR077W UBP12P39538 1254 aa11.5□□□□□ -0.57
SED1YDR077W YGL082WP53155 381 aa11.5□□□□□ -0.57
SED1YDR077W BUG1Q12191 341 aa11.5□□□□□ -0.57
SED1YDR077W RFC1P38630 861 aaKnown RBP11.48□□□□□ -0.57
SED1YDR077W SSF1P38789 453 aaPredicted RBP11.48□□□□□ -0.57
SED1YDR077W NKP2Q06162 153 aa11.48□□□□□ -0.57
SED1YDR077W NYV1Q12255 253 aa11.48□□□□□ -0.57
SED1YDR077W NCB2Q92317 146 aa11.48□□□□□ -0.57
SED1YDR077W RAD50P12753 1312 aa11.48□□□□□ -0.57
SED1YDR077W BDP1P46678 594 aa11.47□□□□□ -0.57
SED1YDR077W SUP35P05453 685 aaKnown RBP11.46□□□□□ -0.57
SED1YDR077W RPL17AP05740 184 aaKnown RBP11.46□□□□□ -0.57
SED1YDR077W DCD1P06773 312 aa11.46□□□□□ -0.57
SED1YDR077W BDF1P35817 686 aa11.46□□□□□ -0.57
SED1YDR077W RPL17BP46990 184 aaKnown RBP11.46□□□□□ -0.57
SED1YDR077W PSH1Q12161 406 aa11.46□□□□□ -0.57
SED1YDR077W ITC1P53125 1264 aa11.45□□□□□ -0.58
SED1YDR077W MTC5Q03897 1148 aa11.45□□□□□ -0.58
SED1YDR077W SSK22P25390 1331 aaPredicted RBP11.44□□□□□ -0.58
SED1YDR077W UTP22P53254 1237 aaPredicted RBP11.44□□□□□ -0.58
SED1YDR077W FCP1Q03254 732 aa11.44□□□□□ -0.58
SED1YDR077W CDC16P09798 840 aa11.43□□□□□ -0.58
SED1YDR077W LYS4P49367 693 aaPredicted RBP11.43□□□□□ -0.58
SED1YDR077W SAC3P46674 1301 aa11.42□□□□□ -0.58
SED1YDR077W RAT1Q02792 1006 aaKnown RBP11.42□□□□□ -0.58
SED1YDR077W PDR18P53756 1333 aa11.4□□□□□ -0.58
SED1YDR077W YIR014WP40570 242 aa11.4□□□□□ -0.58
SED1YDR077W ALD2P47771 506 aa11.4□□□□□ -0.58
SED1YDR077W HAT1Q12341 374 aa11.4□□□□□ -0.58
SED1YDR077W ALD3P54114 506 aa11.39□□□□□ -0.59
SED1YDR077W MLC1P53141 149 aa11.38□□□□□ -0.59
SED1YDR077W DIB1Q06819 143 aaPredicted RBP11.38□□□□□ -0.59
SED1YDR077W SNU66Q12420 587 aaPredicted RBP11.38□□□□□ -0.59
SED1YDR077W NOT3P06102 836 aaKnown RBP11.37□□□□□ -0.59
SED1YDR077W ECM21P38167 1117 aaKnown RBP11.37□□□□□ -0.59
SED1YDR077W GTT3P39996 337 aa11.37□□□□□ -0.59
SED1YDR077W CTH1P47976 325 aa11.37□□□□□ -0.59
SED1YDR077W HXT10P43581 546 aa11.36□□□□□ -0.59
SED1YDR077W HPC2Q01448 625 aa11.36□□□□□ -0.59
SED1YDR077W VAS1P07806 1104 aaKnown RBP11.35□□□□□ -0.59
SED1YDR077W SSA2P10592 639 aaKnown RBP11.35□□□□□ -0.59
SED1YDR077W YBL086CP38177 466 aa11.35□□□□□ -0.59
SED1YDR077W YGL242CP53066 181 aa11.35□□□□□ -0.59
SED1YDR077W GCR2Q01722 534 aa11.35□□□□□ -0.59
SED1YDR077W CTI6Q08923 506 aa11.35□□□□□ -0.59
SED1YDR077W GYP5Q12344 894 aa11.35□□□□□ -0.59
SED1YDR077W SLA1P32790 1244 aa11.34□□□□□ -0.59
SED1YDR077W DLD1P32891 587 aa11.34□□□□□ -0.59
SED1YDR077W BRN1P38170 754 aa11.34□□□□□ -0.59
SED1YDR077W BRE1Q07457 700 aaKnown RBP11.34□□□□□ -0.59
SED1YDR077W UGA2P38067 497 aa11.33□□□□□ -0.6
SED1YDR077W RIX7Q07844 837 aaKnown RBP11.33□□□□□ -0.6
SED1YDR077W YGL015CP33199 130 aa11.32□□□□□ -0.6
SED1YDR077W TOS1P38288 455 aa11.32□□□□□ -0.6
SED1YDR077W BDF2Q07442 638 aa11.32□□□□□ -0.6
SED1YDR077W UBP16Q02863 499 aa11.31□□□□□ -0.6
SED1YDR077W OPY1P38271 328 aa11.3□□□□□ -0.6
SED1YDR077W RMD1Q03441 430 aa11.3□□□□□ -0.6
SED1YDR077W ADR1P07248 1323 aa11.3□□□□□ -0.6
SED1YDR077W ALO1P54783 526 aaKnown RBP11.29□□□□□ -0.6
SED1YDR077W SEC18P18759 758 aaKnown RBP11.28□□□□□ -0.6
SED1YDR077W KTR3P38130 404 aaPredicted RBP11.28□□□□□ -0.6
SED1YDR077W MRPS35P53292 345 aa11.28□□□□□ -0.6
SED1YDR077W FPR4Q06205 392 aaPredicted RBP11.28□□□□□ -0.6
SED1YDR077W IRC3Q06683 689 aa11.28□□□□□ -0.6
SED1YDR077W POM152P39685 1337 aa11.28□□□□□ -0.6
SED1YDR077W SYF1Q04048 859 aaPredicted RBP11.27□□□□□ -0.61
SED1YDR077W RIM20Q12033 661 aa11.27□□□□□ -0.61
SED1YDR077W DPH6Q12429 685 aa11.27□□□□□ -0.61
SED1YDR077W AI2P03876 854 aa11.26□□□□□ -0.61
SED1YDR077W PCT1P13259 424 aa11.26□□□□□ -0.61
SED1YDR077W NGR1P32831 672 aaKnown RBP11.26□□□□□ -0.61
SED1YDR077W HXT13P39924 564 aa11.26□□□□□ -0.61
SED1YDR077W YNL193WP53870 558 aa11.26□□□□□ -0.61
SED1YDR077W RRI2Q12348 645 aa11.26□□□□□ -0.61
SED1YDR077W DUR1,2P32528 1835 aaKnown RBP11.25□□□□□ -0.61
SED1YDR077W PIF1P07271 859 aa11.25□□□□□ -0.61
SED1YDR077W KTR1P27810 393 aaKnown RBP11.25□□□□□ -0.61
SED1YDR077W OSH3P38713 996 aaKnown RBP11.25□□□□□ -0.61
SED1YDR077W STM1P39015 273 aaKnown RBP11.25□□□□□ -0.61
SED1YDR077W HXT17P53631 564 aa11.25□□□□□ -0.61
SED1YDR077W SRC1Q03707 834 aa11.25□□□□□ -0.61
SED1YDR077W RPN7Q06103 429 aaKnown RBP11.25□□□□□ -0.61
SED1YDR077W THI3Q07471 609 aa11.25□□□□□ -0.61
SED1YDR077W RLF2Q12495 606 aa11.25□□□□□ -0.61
SED1YDR077W PMD1P32634 1753 aa11.25□□□□□ -0.61
SED1YDR077W TPM1P17536 199 aaKnown RBP11.24□□□□□ -0.61
SED1YDR077W AAP1P37898 856 aaKnown RBP11.24□□□□□ -0.61
SED1YDR077W PBY1P38254 753 aa11.24□□□□□ -0.61
SED1YDR077W EPS1P40557 701 aa11.24□□□□□ -0.61
SED1YDR077W SAS4Q04003 481 aa11.24□□□□□ -0.61
SED1YDR077W RNR2P09938 399 aaKnown RBP11.23□□□□□ -0.61
SED1YDR077W IME2P32581 645 aa11.23□□□□□ -0.61
SED1YDR077W PFF1P38244 976 aa11.23□□□□□ -0.61
SED1YDR077W RPN1P38764 993 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms