RNA–Protein interactions for RNA: YDR064W

RPS13, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS13, Length 456 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS13	YDR064W	SSK2	P53599	1579 aa		4.65	□□□□□ -1.66
RPS13	YDR064W	GEA2	P39993	1459 aa	Known RBP	4.65	□□□□□ -1.66
RPS13	YDR064W	VAC17	P25591	423 aa		4.65	□□□□□ -1.67
RPS13	YDR064W	TPO2	P53283	614 aa		4.65	□□□□□ -1.67
RPS13	YDR064W	RGA2	Q06407	1009 aa		4.65	□□□□□ -1.67
RPS13	YDR064W	RAD59	Q12223	238 aa		4.65	□□□□□ -1.67
RPS13	YDR064W	SEC20	P28791	383 aa		4.64	□□□□□ -1.67
RPS13	YDR064W	LTV1	P34078	463 aa		4.64	□□□□□ -1.67
RPS13	YDR064W	PEA2	P40091	420 aa		4.64	□□□□□ -1.67
RPS13	YDR064W	MSB3	P48566	633 aa	Predicted RBP	4.64	□□□□□ -1.67
RPS13	YDR064W	DMA2	P53924	522 aa		4.64	□□□□□ -1.67
RPS13	YDR064W	APP1	P53933	587 aa		4.64	□□□□□ -1.67
RPS13	YDR064W	DOS2	P54858	310 aa		4.64	□□□□□ -1.67
RPS13	YDR064W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
RPS13	YDR064W	UGA3	P26370	528 aa		4.63	□□□□□ -1.67
RPS13	YDR064W	MRT4	P33201	236 aa	Known RBP	4.63	□□□□□ -1.67
RPS13	YDR064W	YMR124W	P39523	943 aa	Known RBP	4.63	□□□□□ -1.67
RPS13	YDR064W	LCB5	Q06147	687 aa	Known RBP	4.63	□□□□□ -1.67
RPS13	YDR064W	ETT1	Q08421	412 aa	Known RBP	4.63	□□□□□ -1.67
RPS13	YDR064W	ESC1	Q03661	1658 aa	Known RBP	4.62	□□□□□ -1.67
RPS13	YDR064W	TAF13	P11747	167 aa		4.62	□□□□□ -1.67
RPS13	YDR064W	RPT2	P40327	437 aa	Known RBP	4.62	□□□□□ -1.67
RPS13	YDR064W	FIG4	P42837	879 aa		4.62	□□□□□ -1.67
RPS13	YDR064W	PTK2	P47116	818 aa	Known RBP	4.62	□□□□□ -1.67
RPS13	YDR064W	KIP3	P53086	805 aa	Known RBP	4.62	□□□□□ -1.67
RPS13	YDR064W	APL5	Q08951	932 aa	Known RBP	4.62	□□□□□ -1.67
RPS13	YDR064W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
RPS13	YDR064W	RPO31	P04051	1460 aa		4.62	□□□□□ -1.67
RPS13	YDR064W	XRN1	P22147	1528 aa	Known RBP	4.62	□□□□□ -1.67
RPS13	YDR064W	GUA1	P38625	525 aa	Known RBP	4.61	□□□□□ -1.67
RPS13	YDR064W	TY4A-J	P47023	414 aa		4.61	□□□□□ -1.67
RPS13	YDR064W	NOP7	P53261	605 aa	Known RBP	4.61	□□□□□ -1.67
RPS13	YDR064W	EAF7	P53911	425 aa	Known RBP	4.61	□□□□□ -1.67
RPS13	YDR064W	RPN7	Q06103	429 aa	Known RBP	4.61	□□□□□ -1.67
RPS13	YDR064W	YDL176W	Q12027	708 aa		4.61	□□□□□ -1.67
RPS13	YDR064W	RRP14	P36080	434 aa	Known RBP	4.6	□□□□□ -1.67
RPS13	YDR064W	GEF1	P37020	779 aa		4.6	□□□□□ -1.67
RPS13	YDR064W	ISW1	P38144	1129 aa		4.6	□□□□□ -1.67
RPS13	YDR064W	ATG36	P46983	293 aa		4.6	□□□□□ -1.67
RPS13	YDR064W	PRP3	Q03338	469 aa	Predicted RBP	4.6	□□□□□ -1.67
RPS13	YDR064W	RCF1	Q03713	159 aa		4.6	□□□□□ -1.67
RPS13	YDR064W	SEC9	P40357	651 aa		4.59	□□□□□ -1.67
RPS13	YDR064W	SMC3	P47037	1230 aa		4.59	□□□□□ -1.67
RPS13	YDR064W	YBL086C	P38177	466 aa		4.58	□□□□□ -1.68
RPS13	YDR064W	DJP1	P40564	432 aa		4.58	□□□□□ -1.68
RPS13	YDR064W	SEC27	P41811	889 aa	Known RBP	4.58	□□□□□ -1.68
RPS13	YDR064W	OPT2	Q06593	877 aa		4.58	□□□□□ -1.68
RPS13	YDR064W	YPR084W	Q06821	456 aa		4.58	□□□□□ -1.68
RPS13	YDR064W	CFT2	Q12102	859 aa	Predicted RBP	4.58	□□□□□ -1.68
RPS13	YDR064W	YLL054C	Q12244	843 aa		4.58	□□□□□ -1.68
RPS13	YDR064W	DAL5	P15365	543 aa		4.57	□□□□□ -1.68
RPS13	YDR064W	EMW1	P42842	904 aa	Known RBP	4.57	□□□□□ -1.68
RPS13	YDR064W	YGL081W	P53156	320 aa		4.57	□□□□□ -1.68
RPS13	YDR064W	FAR11	P53917	953 aa		4.57	□□□□□ -1.68
RPS13	YDR064W	IMH1	Q06704	911 aa	Known RBP	4.57	□□□□□ -1.68
RPS13	YDR064W	BRE1	Q07457	700 aa	Known RBP	4.57	□□□□□ -1.68
RPS13	YDR064W	NOP8	Q08287	484 aa	Predicted RBP	4.57	□□□□□ -1.68
RPS13	YDR064W	BUD21	Q08492	214 aa	Predicted RBP	4.57	□□□□□ -1.68
RPS13	YDR064W	YVC1	Q12324	675 aa		4.57	□□□□□ -1.68
RPS13	YDR064W	SRF1	Q12516	437 aa		4.57	□□□□□ -1.68
RPS13	YDR064W	TY4B-P	A0A0B7P3V8	1104 aa		4.56	□□□□□ -1.68
RPS13	YDR064W	RAD2	P07276	1031 aa		4.56	□□□□□ -1.68
RPS13	YDR064W	TEC1	P18412	486 aa		4.56	□□□□□ -1.68
RPS13	YDR064W	BYE1	P36106	594 aa		4.56	□□□□□ -1.68
RPS13	YDR064W	NPR3	P38742	1146 aa		4.56	□□□□□ -1.68
RPS13	YDR064W	VID30	P53076	958 aa		4.56	□□□□□ -1.68
RPS13	YDR064W	CAF120	P53836	1060 aa		4.56	□□□□□ -1.68
RPS13	YDR064W	NOP58	Q12499	511 aa	Known RBP	4.56	□□□□□ -1.68
RPS13	YDR064W	RKR1	Q04781	1562 aa		4.56	□□□□□ -1.68
RPS13	YDR064W	DNF2	Q12675	1612 aa		4.55	□□□□□ -1.68
RPS13	YDR064W	MAK16	P10962	306 aa	Predicted RBP	4.55	□□□□□ -1.68
RPS13	YDR064W	MSH3	P25336	1018 aa		4.55	□□□□□ -1.68
RPS13	YDR064W	DEP1	P31385	405 aa		4.55	□□□□□ -1.68
RPS13	YDR064W	DLD1	P32891	587 aa		4.55	□□□□□ -1.68
RPS13	YDR064W	SAP190	P36123	1033 aa		4.55	□□□□□ -1.68
RPS13	YDR064W	PAF1	P38351	445 aa		4.55	□□□□□ -1.68
RPS13	YDR064W	AAD14	P42884	376 aa		4.55	□□□□□ -1.68
RPS13	YDR064W	PKH1	Q03407	766 aa		4.55	□□□□□ -1.68
RPS13	YDR064W	YML020W	Q03722	664 aa		4.55	□□□□□ -1.68
RPS13	YDR064W	ECM16	Q04217	1267 aa	Known RBP	4.55	□□□□□ -1.68
RPS13	YDR064W	YDR341C	Q05506	607 aa	Known RBP	4.55	□□□□□ -1.68
RPS13	YDR064W	RRP15	Q06511	250 aa	Predicted RBP	4.55	□□□□□ -1.68
RPS13	YDR064W	DRS2	P39524	1355 aa		4.54	□□□□□ -1.68
RPS13	YDR064W	MCM1	P11746	286 aa		4.54	□□□□□ -1.68
RPS13	YDR064W	IME2	P32581	645 aa		4.54	□□□□□ -1.68
RPS13	YDR064W	SSF1	P38789	453 aa	Predicted RBP	4.54	□□□□□ -1.68
RPS13	YDR064W	NUP85	P46673	744 aa		4.54	□□□□□ -1.68
RPS13	YDR064W	MTR4	P47047	1073 aa	Known RBP	4.54	□□□□□ -1.68
RPS13	YDR064W	ZDS1	P50111	915 aa	Known RBP	4.54	□□□□□ -1.68
RPS13	YDR064W	ALD3	P54114	506 aa		4.54	□□□□□ -1.68
RPS13	YDR064W	GIR2	Q03768	265 aa	Predicted RBP	4.54	□□□□□ -1.68
RPS13	YDR064W	COG8	Q04632	607 aa		4.54	□□□□□ -1.68
RPS13	YDR064W	DFG5	Q05031	458 aa		4.54	□□□□□ -1.68
RPS13	YDR064W	YLR257W	Q06146	321 aa	Known RBP	4.54	□□□□□ -1.68
RPS13	YDR064W	YOR093C	Q12275	1648 aa		4.54	□□□□□ -1.68
RPS13	YDR064W	MFT1	P33441	392 aa	Known RBP	4.53	□□□□□ -1.68
RPS13	YDR064W	MKS1	P34072	584 aa		4.53	□□□□□ -1.68
RPS13	YDR064W	LEM3	P42838	414 aa		4.53	□□□□□ -1.68
RPS13	YDR064W	YJR008W	P47085	338 aa		4.53	□□□□□ -1.68
RPS13	YDR064W	MEH1	Q02205	184 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms