RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A UBX7P38349 436 aa6.02□□□□□ -1.45
RIM1YCR028C-A UTP7P40055 554 aaKnown RBP6.02□□□□□ -1.45
RIM1YCR028C-A LSC2P53312 427 aa6.02□□□□□ -1.45
RIM1YCR028C-A YML083CQ04526 418 aa6.02□□□□□ -1.45
RIM1YCR028C-A SWI5P08153 709 aa6.01□□□□□ -1.45
RIM1YCR028C-A MTC5Q03897 1148 aa6.01□□□□□ -1.45
RIM1YCR028C-A YLR346CQ06139 101 aa6.01□□□□□ -1.45
RIM1YCR028C-A RPS6AP0CX37 236 aaKnown RBP6□□□□□ -1.45
RIM1YCR028C-A RPS6BP0CX38 236 aaPredicted RBP6□□□□□ -1.45
RIM1YCR028C-A YJR098CP47139 656 aa5.99□□□□□ -1.45
RIM1YCR028C-A ROM1P53046 1155 aa5.99□□□□□ -1.45
RIM1YCR028C-A OPT2Q06593 877 aa5.99□□□□□ -1.45
RIM1YCR028C-A GAS4Q08271 471 aa5.99□□□□□ -1.45
RIM1YCR028C-A ALA1P40825 983 aaKnown RBP5.98□□□□□ -1.45
RIM1YCR028C-A SUM1P46676 1062 aa5.98□□□□□ -1.45
RIM1YCR028C-A CYT1P07143 309 aa5.97□□□□□ -1.45
RIM1YCR028C-A UBP2Q01476 1272 aa5.97□□□□□ -1.45
RIM1YCR028C-A TCB1Q12466 1186 aa5.97□□□□□ -1.45
RIM1YCR028C-A VAN1P23642 535 aa5.96□□□□□ -1.46
RIM1YCR028C-A SSN3P39073 555 aa5.96□□□□□ -1.46
RIM1YCR028C-A SSA1P10591 642 aaKnown RBP5.94□□□□□ -1.46
RIM1YCR028C-A DAL1P32375 460 aa5.94□□□□□ -1.46
RIM1YCR028C-A RPL34AP87262 121 aaPredicted RBP5.94□□□□□ -1.46
RIM1YCR028C-A GLY1P37303 387 aaKnown RBP5.93□□□□□ -1.46
RIM1YCR028C-A MSN5P52918 1224 aa5.93□□□□□ -1.46
RIM1YCR028C-A YPQ2Q06328 317 aa5.93□□□□□ -1.46
RIM1YCR028C-A SCW11P53189 542 aa5.92□□□□□ -1.46
RIM1YCR028C-A PUF6Q04373 656 aaKnown RBP5.92□□□□□ -1.46
RIM1YCR028C-A TRK2P28584 889 aa5.91□□□□□ -1.46
RIM1YCR028C-A NGR1P32831 672 aaKnown RBP5.91□□□□□ -1.46
RIM1YCR028C-A OSH7P38755 437 aa5.91□□□□□ -1.46
RIM1YCR028C-A CWH41P53008 833 aa5.91□□□□□ -1.46
RIM1YCR028C-A PUN1Q06991 263 aa5.91□□□□□ -1.46
RIM1YCR028C-A TY1A-BLQ12266 440 aa5.91□□□□□ -1.46
RIM1YCR028C-A TRS33Q99394 268 aa5.91□□□□□ -1.46
RIM1YCR028C-A UBP1P25037 809 aa5.9□□□□□ -1.46
RIM1YCR028C-A ACO2P39533 789 aa5.9□□□□□ -1.46
RIM1YCR028C-A VTC4P47075 721 aa5.9□□□□□ -1.46
RIM1YCR028C-A CWC15Q03772 175 aaKnown RBP5.9□□□□□ -1.46
RIM1YCR028C-A MCM1P11746 286 aa5.89□□□□□ -1.47
RIM1YCR028C-A IRE1P32361 1115 aa5.89□□□□□ -1.47
RIM1YCR028C-A SLA1P32790 1244 aa5.89□□□□□ -1.47
RIM1YCR028C-A GEF1P37020 779 aa5.89□□□□□ -1.47
RIM1YCR028C-A AHP1P38013 176 aaKnown RBP5.89□□□□□ -1.47
RIM1YCR028C-A YGR035CP53222 116 aa5.89□□□□□ -1.47
RIM1YCR028C-A SUV3P32580 737 aa5.88□□□□□ -1.47
RIM1YCR028C-A JJJ2P46997 583 aa5.88□□□□□ -1.47
RIM1YCR028C-A Q0182Q9ZZW1 134 aa5.88□□□□□ -1.47
RIM1YCR028C-A SHM1P37292 490 aaPredicted RBP5.87□□□□□ -1.47
RIM1YCR028C-A TY1A-DR3Q12441 440 aa5.87□□□□□ -1.47
RIM1YCR028C-A CDC19P00549 500 aaKnown RBP5.86□□□□□ -1.47
RIM1YCR028C-A RPS31P05759 152 aaKnown RBP5.86□□□□□ -1.47
RIM1YCR028C-A SRS2P12954 1174 aa5.86□□□□□ -1.47
RIM1YCR028C-A YIR007WP40566 764 aa5.86□□□□□ -1.47
RIM1YCR028C-A YNL165WP53891 406 aa5.86□□□□□ -1.47
RIM1YCR028C-A HPF1Q05164 967 aa5.86□□□□□ -1.47
RIM1YCR028C-A ALD4P46367 519 aaKnown RBP5.85□□□□□ -1.47
RIM1YCR028C-A UBP15P50101 1230 aa5.85□□□□□ -1.47
RIM1YCR028C-A PNP1Q05788 311 aa5.85□□□□□ -1.47
RIM1YCR028C-A YBR197CP38306 217 aa5.84□□□□□ -1.47
RIM1YCR028C-A TPS3P38426 1054 aaKnown RBP5.84□□□□□ -1.47
RIM1YCR028C-A NAM8Q00539 523 aaKnown RBP5.84□□□□□ -1.47
RIM1YCR028C-A HXT5P38695 592 aa5.83□□□□□ -1.48
RIM1YCR028C-A YTA6P40328 754 aa5.83□□□□□ -1.48
RIM1YCR028C-A TY1A-MR1Q04215 440 aa5.83□□□□□ -1.48
RIM1YCR028C-A PDC6P26263 563 aaKnown RBP5.82□□□□□ -1.48
RIM1YCR028C-A MLF3P32047 452 aa5.82□□□□□ -1.48
RIM1YCR028C-A CDC3P32457 520 aaKnown RBP5.82□□□□□ -1.48
RIM1YCR028C-A SCD5P34758 872 aa5.82□□□□□ -1.48
RIM1YCR028C-A ROG3P43602 733 aa5.82□□□□□ -1.48
RIM1YCR028C-A FOX2Q02207 900 aaKnown RBP5.82□□□□□ -1.48
RIM1YCR028C-A PSH1Q12161 406 aa5.82□□□□□ -1.48
RIM1YCR028C-A RRN6P32786 894 aa5.81□□□□□ -1.48
RIM1YCR028C-A CAB1Q04430 367 aa5.81□□□□□ -1.48
RIM1YCR028C-A FUR4P05316 633 aaKnown RBP5.8□□□□□ -1.48
RIM1YCR028C-A ISC10P32645 267 aa5.8□□□□□ -1.48
RIM1YCR028C-A KAR5Q04746 504 aa5.79□□□□□ -1.48
RIM1YCR028C-A UTP4Q06679 776 aaKnown RBP5.79□□□□□ -1.48
RIM1YCR028C-A LEU1P07264 779 aaKnown RBP5.78□□□□□ -1.48
RIM1YCR028C-A MRPL33P20084 86 aa5.78□□□□□ -1.48
RIM1YCR028C-A KAP122P32767 1081 aa5.78□□□□□ -1.48
RIM1YCR028C-A MRPL16P38064 232 aa5.78□□□□□ -1.48
RIM1YCR028C-A MTO1P53070 669 aa5.78□□□□□ -1.48
RIM1YCR028C-A YMR265CQ03508 461 aaKnown RBP5.78□□□□□ -1.48
RIM1YCR028C-A CCP1P00431 361 aa5.77□□□□□ -1.49
RIM1YCR028C-A VMA3P25515 160 aa5.77□□□□□ -1.49
RIM1YCR028C-A CUZ1P53899 274 aa5.77□□□□□ -1.49
RIM1YCR028C-A HAT1Q12341 374 aa5.77□□□□□ -1.49
RIM1YCR028C-A DIT1P21623 536 aa5.76□□□□□ -1.49
RIM1YCR028C-A BOL3P39724 118 aa5.76□□□□□ -1.49
RIM1YCR028C-A QDR2P40474 542 aa5.76□□□□□ -1.49
RIM1YCR028C-A ALD2P47771 506 aa5.76□□□□□ -1.49
RIM1YCR028C-A BOI1P38041 980 aaKnown RBP5.75□□□□□ -1.49
RIM1YCR028C-A KRE33P53914 1056 aaKnown RBP5.75□□□□□ -1.49
RIM1YCR028C-A STB3Q12427 513 aa5.75□□□□□ -1.49
RIM1YCR028C-A LSO1Q3E827 93 aa5.75□□□□□ -1.49
RIM1YCR028C-A RGP1P16664 663 aa5.74□□□□□ -1.49
RIM1YCR028C-A LDH1P38139 375 aa5.74□□□□□ -1.49
RIM1YCR028C-A SPR3P41901 512 aa5.74□□□□□ -1.49
RIM1YCR028C-A LSB3P43603 459 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 63.7 ms