RNA–Protein interactions for RNA: YCL034W

LSB5, Transcript of Protein of unknown function, yeast

Gene LSB5, Length 1,065 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSB5	YCL034W	MRP7	P12687	371 aa		11.31	□□□□□ -0.6
LSB5	YCL034W	SER1	P33330	395 aa	Known RBP	11.31	□□□□□ -0.6
LSB5	YCL034W	MAP2	P38174	421 aa	Known RBP	11.31	□□□□□ -0.6
LSB5	YCL034W	YIL092W	P40497	633 aa		11.31	□□□□□ -0.6
LSB5	YCL034W	CST6	P40535	587 aa		11.31	□□□□□ -0.6
LSB5	YCL034W	YPP1	P46951	817 aa		11.31	□□□□□ -0.6
LSB5	YCL034W	YDR306C	Q06640	478 aa		11.31	□□□□□ -0.6
LSB5	YCL034W	NOP8	Q08287	484 aa	Predicted RBP	11.3	□□□□□ -0.6
LSB5	YCL034W	TOS1	P38288	455 aa		11.29	□□□□□ -0.6
LSB5	YCL034W	YJR008W	P47085	338 aa		11.29	□□□□□ -0.6
LSB5	YCL034W	ZDS2	P54786	942 aa		11.29	□□□□□ -0.6
LSB5	YCL034W	VPS64	Q03944	604 aa		11.29	□□□□□ -0.6
LSB5	YCL034W	YPR204W	Q08995	1032 aa		11.29	□□□□□ -0.6
LSB5	YCL034W	DAL5	P15365	543 aa		11.28	□□□□□ -0.6
LSB5	YCL034W	ARG8	P18544	423 aa		11.28	□□□□□ -0.6
LSB5	YCL034W	YGL015C	P33199	130 aa		11.27	□□□□□ -0.61
LSB5	YCL034W	YGL082W	P53155	381 aa		11.27	□□□□□ -0.61
LSB5	YCL034W	HPC2	Q01448	625 aa		11.27	□□□□□ -0.61
LSB5	YCL034W	RAT1	Q02792	1006 aa	Known RBP	11.27	□□□□□ -0.61
LSB5	YCL034W	LPD1	P09624	499 aa	Known RBP	11.26	□□□□□ -0.61
LSB5	YCL034W	APL2	P36000	726 aa	Predicted RBP	11.26	□□□□□ -0.61
LSB5	YCL034W	DIB1	Q06819	143 aa	Predicted RBP	11.26	□□□□□ -0.61
LSB5	YCL034W	SWI1	P09547	1314 aa		11.26	□□□□□ -0.61
LSB5	YCL034W	RPS19A	P07280	144 aa	Known RBP	11.25	□□□□□ -0.61
LSB5	YCL034W	RPS19B	P07281	144 aa	Predicted RBP	11.25	□□□□□ -0.61
LSB5	YCL034W	NUP133	P36161	1157 aa		11.25	□□□□□ -0.61
LSB5	YCL034W	SSK22	P25390	1331 aa	Predicted RBP	11.25	□□□□□ -0.61
LSB5	YCL034W	MRM1	P25270	412 aa		11.24	□□□□□ -0.61
LSB5	YCL034W	PKH1	Q03407	766 aa		11.23	□□□□□ -0.61
LSB5	YCL034W	CSI1	Q04368	295 aa		11.23	□□□□□ -0.61
LSB5	YCL034W	FPR3	P38911	411 aa	Known RBP	11.22	□□□□□ -0.61
LSB5	YCL034W	HAT1	Q12341	374 aa		11.22	□□□□□ -0.61
LSB5	YCL034W	RAD24	P32641	659 aa		11.21	□□□□□ -0.61
LSB5	YCL034W	SET1	P38827	1080 aa	Known RBP	11.21	□□□□□ -0.61
LSB5	YCL034W	FUN12	P39730	1002 aa	Known RBP	11.21	□□□□□ -0.61
LSB5	YCL034W	EBP2	P36049	427 aa	Known RBP	11.2	□□□□□ -0.62
LSB5	YCL034W	CAB3	P36076	571 aa		11.2	□□□□□ -0.62
LSB5	YCL034W	TRP5	P00931	707 aa	Known RBP	11.19	□□□□□ -0.62
LSB5	YCL034W	SUP35	P05453	685 aa	Known RBP	11.19	□□□□□ -0.62
LSB5	YCL034W	BOI2	P39969	1040 aa		11.19	□□□□□ -0.62
LSB5	YCL034W	HGH1	P48362	394 aa	Known RBP	11.19	□□□□□ -0.62
LSB5	YCL034W	RIX7	Q07844	837 aa	Known RBP	11.19	□□□□□ -0.62
LSB5	YCL034W	CTI6	Q08923	506 aa		11.19	□□□□□ -0.62
LSB5	YCL034W	RAM2	P29703	316 aa		11.18	□□□□□ -0.62
LSB5	YCL034W	YGR122W	P53272	402 aa		11.18	□□□□□ -0.62
LSB5	YCL034W	YNG2	P38806	282 aa	Known RBP	11.17	□□□□□ -0.62
LSB5	YCL034W	POL32	P47110	350 aa		11.17	□□□□□ -0.62
LSB5	YCL034W	MTC5	Q03897	1148 aa		11.17	□□□□□ -0.62
LSB5	YCL034W	SAC3	P46674	1301 aa		11.16	□□□□□ -0.62
LSB5	YCL034W	PFF1	P38244	976 aa		11.16	□□□□□ -0.62
LSB5	YCL034W	UBP12	P39538	1254 aa		11.16	□□□□□ -0.62
LSB5	YCL034W	BDF2	Q07442	638 aa		11.16	□□□□□ -0.62
LSB5	YCL034W	SWC3	P31376	625 aa		11.15	□□□□□ -0.62
LSB5	YCL034W	YKL222C	P35995	705 aa		11.15	□□□□□ -0.62
LSB5	YCL034W	ITC1	P53125	1264 aa		11.15	□□□□□ -0.62
LSB5	YCL034W	PUF6	Q04373	656 aa	Known RBP	11.15	□□□□□ -0.62
LSB5	YCL034W	MSN5	P52918	1224 aa		11.14	□□□□□ -0.63
LSB5	YCL034W	IRC3	Q06683	689 aa		11.14	□□□□□ -0.63
LSB5	YCL034W	PSH1	Q12161	406 aa		11.14	□□□□□ -0.63
LSB5	YCL034W	ERT1	P38140	529 aa		11.13	□□□□□ -0.63
LSB5	YCL034W	SPO1	P53541	631 aa		11.13	□□□□□ -0.63
LSB5	YCL034W	PMD1	P32634	1753 aa		11.13	□□□□□ -0.63
LSB5	YCL034W	CTT1	P06115	562 aa		11.12	□□□□□ -0.63
LSB5	YCL034W	GCD7	P32502	381 aa	Predicted RBP	11.12	□□□□□ -0.63
LSB5	YCL034W	SSF1	P38789	453 aa	Predicted RBP	11.12	□□□□□ -0.63
LSB5	YCL034W	FCP1	Q03254	732 aa		11.12	□□□□□ -0.63
LSB5	YCL034W	SYF1	Q04048	859 aa	Predicted RBP	11.12	□□□□□ -0.63
LSB5	YCL034W	SIT4	P20604	311 aa		11.11	□□□□□ -0.63
LSB5	YCL034W	SLX5	P32828	619 aa	Known RBP	11.11	□□□□□ -0.63
LSB5	YCL034W	ERO1	Q03103	563 aa		11.09	□□□□□ -0.63
LSB5	YCL034W	EAF6	P47128	113 aa		11.08	□□□□□ -0.64
LSB5	YCL034W	SNU66	Q12420	587 aa	Predicted RBP	11.08	□□□□□ -0.64
LSB5	YCL034W	UBP16	Q02863	499 aa		11.07	□□□□□ -0.64
LSB5	YCL034W	SAS4	Q04003	481 aa		11.07	□□□□□ -0.64
LSB5	YCL034W	ECM16	Q04217	1267 aa	Known RBP	11.07	□□□□□ -0.64
LSB5	YCL034W	NCB2	Q92317	146 aa		11.07	□□□□□ -0.64
LSB5	YCL034W	SMY1	P32364	656 aa	Known RBP	11.06	□□□□□ -0.64
LSB5	YCL034W	DPH6	Q12429	685 aa		11.06	□□□□□ -0.64
LSB5	YCL034W	RPS9B	P05755	195 aa	Known RBP	11.05	□□□□□ -0.64
LSB5	YCL034W	RPN1	P38764	993 aa	Known RBP	11.05	□□□□□ -0.64
LSB5	YCL034W	NMD2	P38798	1089 aa	Known RBP	11.05	□□□□□ -0.64
LSB5	YCL034W	ILV3	P39522	585 aa	Known RBP	11.05	□□□□□ -0.64
LSB5	YCL034W	YER156C	P40093	338 aa	Known RBP	11.05	□□□□□ -0.64
LSB5	YCL034W	CWH41	P53008	833 aa		11.05	□□□□□ -0.64
LSB5	YCL034W	DUR1,2	P32528	1835 aa	Known RBP	11.05	□□□□□ -0.64
LSB5	YCL034W	HKR1	P41809	1802 aa		11.05	□□□□□ -0.64
LSB5	YCL034W	FRD1	P32614	470 aa	Known RBP	11.04	□□□□□ -0.64
LSB5	YCL034W	GRX6	Q12438	231 aa		11.04	□□□□□ -0.64
LSB5	YCL034W	UBX2	Q04228	584 aa		11.03	□□□□□ -0.64
LSB5	YCL034W	GYP5	Q12344	894 aa		11.02	□□□□□ -0.65
LSB5	YCL034W	NUG1	P40010	520 aa	Known RBP	11.01	□□□□□ -0.65
LSB5	YCL034W	ICP55	P40051	511 aa		11.01	□□□□□ -0.65
LSB5	YCL034W	KIN4	Q01919	800 aa		11.01	□□□□□ -0.65
LSB5	YCL034W	ADR1	P07248	1323 aa		11.01	□□□□□ -0.65
LSB5	YCL034W	SSA1	P10591	642 aa	Known RBP	11	□□□□□ -0.65
LSB5	YCL034W	HXT10	P43581	546 aa		11	□□□□□ -0.65
LSB5	YCL034W	SRC1	Q03707	834 aa		11	□□□□□ -0.65
LSB5	YCL034W	CAF20	P12962	161 aa	Known RBP	10.99	□□□□□ -0.65
LSB5	YCL034W	NGR1	P32831	672 aa	Known RBP	10.99	□□□□□ -0.65
LSB5	YCL034W	VPS29	P38759	282 aa		10.99	□□□□□ -0.65

Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms