RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeastyeast

Gene VMA9, Length 222 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA9YCL005W-A VAN1P23642 535 aa3.48□□□□□ -1.85
VMA9YCL005W-A CDC3P32457 520 aaKnown RBP3.48□□□□□ -1.85
VMA9YCL005W-A BOI1P38041 980 aaKnown RBP3.48□□□□□ -1.85
VMA9YCL005W-A BRE2P43132 505 aa3.48□□□□□ -1.85
VMA9YCL005W-A ALD4P46367 519 aaKnown RBP3.48□□□□□ -1.85
VMA9YCL005W-A SUM1P46676 1062 aa3.48□□□□□ -1.85
VMA9YCL005W-A YNL165WP53891 406 aa3.48□□□□□ -1.85
VMA9YCL005W-A YML020WQ03722 664 aa3.48□□□□□ -1.85
VMA9YCL005W-A HAT1Q12341 374 aa3.48□□□□□ -1.85
VMA9YCL005W-A TY1A-DR3Q12441 440 aa3.48□□□□□ -1.85
VMA9YCL005W-A ARG82P07250 355 aa3.47□□□□□ -1.85
VMA9YCL005W-A UBP1P25037 809 aa3.47□□□□□ -1.85
VMA9YCL005W-A SHM1P37292 490 aaPredicted RBP3.47□□□□□ -1.85
VMA9YCL005W-A SSN3P39073 555 aa3.47□□□□□ -1.85
VMA9YCL005W-A DLD3P39976 496 aaKnown RBP3.47□□□□□ -1.85
VMA9YCL005W-A FOX2Q02207 900 aaKnown RBP3.47□□□□□ -1.85
VMA9YCL005W-A PNP1Q05788 311 aa3.47□□□□□ -1.85
VMA9YCL005W-A YJR098CP47139 656 aa3.46□□□□□ -1.86
VMA9YCL005W-A CAB1Q04430 367 aa3.46□□□□□ -1.86
VMA9YCL005W-A SRF1Q12516 437 aa3.46□□□□□ -1.86
VMA9YCL005W-A RPS31P05759 152 aaKnown RBP3.45□□□□□ -1.86
VMA9YCL005W-A ISC10P32645 267 aa3.45□□□□□ -1.86
VMA9YCL005W-A NGR1P32831 672 aaKnown RBP3.45□□□□□ -1.86
VMA9YCL005W-A YBR197CP38306 217 aa3.45□□□□□ -1.86
VMA9YCL005W-A HXT5P38695 592 aa3.45□□□□□ -1.86
VMA9YCL005W-A SSF1P38789 453 aaPredicted RBP3.45□□□□□ -1.86
VMA9YCL005W-A ERP5P38819 212 aa3.45□□□□□ -1.86
VMA9YCL005W-A NUP85P46673 744 aa3.45□□□□□ -1.86
VMA9YCL005W-A PUF6Q04373 656 aaKnown RBP3.45□□□□□ -1.86
VMA9YCL005W-A KAR5Q04746 504 aa3.45□□□□□ -1.86
VMA9YCL005W-A TCB1Q12466 1186 aa3.45□□□□□ -1.86
VMA9YCL005W-A YBL113CQ7M4S9 792 aa3.45□□□□□ -1.86
VMA9YCL005W-A TRS33Q99394 268 aa3.45□□□□□ -1.86
VMA9YCL005W-A SRS2P12954 1174 aa3.44□□□□□ -1.86
VMA9YCL005W-A RPB10P22139 70 aa3.44□□□□□ -1.86
VMA9YCL005W-A MLF3P32047 452 aa3.44□□□□□ -1.86
VMA9YCL005W-A SLA1P32790 1244 aa3.44□□□□□ -1.86
VMA9YCL005W-A ALA1P40825 983 aaKnown RBP3.44□□□□□ -1.86
VMA9YCL005W-A Q0182Q9ZZW1 134 aa3.44□□□□□ -1.86
VMA9YCL005W-A MCM1P11746 286 aa3.43□□□□□ -1.86
VMA9YCL005W-A KTR2P33550 425 aa3.43□□□□□ -1.86
VMA9YCL005W-A GRS1P38088 690 aaKnown RBP3.43□□□□□ -1.86
VMA9YCL005W-A RTT106P40161 455 aa3.43□□□□□ -1.86
VMA9YCL005W-A JJJ2P46997 583 aa3.43□□□□□ -1.86
VMA9YCL005W-A OPT2Q06593 877 aa3.43□□□□□ -1.86
VMA9YCL005W-A NOP8Q08287 484 aaPredicted RBP3.43□□□□□ -1.86
VMA9YCL005W-A CDC19P00549 500 aaKnown RBP3.42□□□□□ -1.86
VMA9YCL005W-A TRL1P09880 827 aaKnown RBP3.42□□□□□ -1.86
VMA9YCL005W-A MET22P32179 357 aa3.42□□□□□ -1.86
VMA9YCL005W-A LSC2P53312 427 aa3.42□□□□□ -1.86
VMA9YCL005W-A PSH1Q12161 406 aa3.42□□□□□ -1.86
VMA9YCL005W-A RPP2BP02400 110 aaKnown RBP3.41□□□□□ -1.86
VMA9YCL005W-A NAB2P32505 525 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
VMA9YCL005W-A GLO3P38682 493 aaKnown RBP3.41□□□□□ -1.86
VMA9YCL005W-A QDR1P40475 563 aa3.41□□□□□ -1.86
VMA9YCL005W-A MDJ2P42834 146 aa3.41□□□□□ -1.86
VMA9YCL005W-A MSN5P52918 1224 aa3.41□□□□□ -1.86
VMA9YCL005W-A CWH41P53008 833 aa3.41□□□□□ -1.86
VMA9YCL005W-A NAM8Q00539 523 aaKnown RBP3.41□□□□□ -1.86
VMA9YCL005W-A SEN54Q02825 467 aaPredicted RBP3.41□□□□□ -1.86
VMA9YCL005W-A FRT1Q99332 602 aa3.41□□□□□ -1.86
VMA9YCL005W-A FUR4P05316 633 aaKnown RBP3.4□□□□□ -1.87
VMA9YCL005W-A MRPL33P20084 86 aa3.4□□□□□ -1.87
VMA9YCL005W-A VMA3P25515 160 aa3.4□□□□□ -1.87
VMA9YCL005W-A PDC6P26263 563 aaKnown RBP3.4□□□□□ -1.87
VMA9YCL005W-A IRE1P32361 1115 aa3.4□□□□□ -1.87
VMA9YCL005W-A DAL1P32375 460 aa3.4□□□□□ -1.87
VMA9YCL005W-A ALD2P47771 506 aa3.4□□□□□ -1.87
VMA9YCL005W-A SUT1P53032 299 aaKnown RBP3.4□□□□□ -1.87
VMA9YCL005W-A LSO1Q3E827 93 aa3.4□□□□□ -1.87
VMA9YCL005W-A AHP1P38013 176 aaKnown RBP3.39□□□□□ -1.87
VMA9YCL005W-A IPL1P38991 367 aa3.39□□□□□ -1.87
VMA9YCL005W-A QDR2P40474 542 aa3.39□□□□□ -1.87
VMA9YCL005W-A ATG1P53104 897 aa3.39□□□□□ -1.87
VMA9YCL005W-A GCR2Q01722 534 aa3.39□□□□□ -1.87
VMA9YCL005W-A TY1A-BLQ12266 440 aa3.39□□□□□ -1.87
VMA9YCL005W-A RRN6P32786 894 aa3.38□□□□□ -1.87
VMA9YCL005W-A SCD5P34758 872 aa3.38□□□□□ -1.87
VMA9YCL005W-A GLY1P37303 387 aaKnown RBP3.38□□□□□ -1.87
VMA9YCL005W-A BSD2P38356 321 aa3.38□□□□□ -1.87
VMA9YCL005W-A OSH7P38755 437 aa3.38□□□□□ -1.87
VMA9YCL005W-A VTC4P47075 721 aa3.38□□□□□ -1.87
VMA9YCL005W-A MTO1P53070 669 aa3.38□□□□□ -1.87
VMA9YCL005W-A YDR444WQ04093 687 aa3.38□□□□□ -1.87
VMA9YCL005W-A LCB5Q06147 687 aaKnown RBP3.38□□□□□ -1.87
VMA9YCL005W-A NUT2Q06213 157 aa3.38□□□□□ -1.87
VMA9YCL005W-A CCP1P00431 361 aa3.37□□□□□ -1.87
VMA9YCL005W-A LEU1P07264 779 aaKnown RBP3.37□□□□□ -1.87
VMA9YCL005W-A YHL050CP38721 697 aa3.37□□□□□ -1.87
VMA9YCL005W-A YHR219WP38900 624 aa3.37□□□□□ -1.87
VMA9YCL005W-A SCW11P53189 542 aa3.37□□□□□ -1.87
VMA9YCL005W-A GPI13Q07830 1017 aa3.37□□□□□ -1.87
VMA9YCL005W-A APC11Q12157 165 aa3.37□□□□□ -1.87
VMA9YCL005W-A WHI5Q12416 295 aa3.37□□□□□ -1.87
VMA9YCL005W-A GAR1P28007 205 aaKnown RBP3.36□□□□□ -1.87
VMA9YCL005W-A RGA1P39083 1007 aa3.36□□□□□ -1.87
VMA9YCL005W-A YIR007WP40566 764 aa3.36□□□□□ -1.87
VMA9YCL005W-A ROG3P43602 733 aa3.36□□□□□ -1.87
VMA9YCL005W-A YNR040WP53736 256 aa3.36□□□□□ -1.87
VMA9YCL005W-A CAF120P53836 1060 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms