RNA–Protein interactions for RNA: ENST00000641719.1

CASC19-254, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-254ENST00000641719 PRSS12P56730 875 aa14.17□□□□□ -0.14
CASC19-254ENST00000641719 LRCH3Q96II8 777 aa14.17□□□□□ -0.14
CASC19-254ENST00000641719 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.17□□□□□ -0.14
CASC19-254ENST00000641719 TSR3Q9UJK0 312 aaKnown RBP14.17□□□□□ -0.14
CASC19-254ENST00000641719 TSKSQ9UJT2 592 aa14.17□□□□□ -0.14
CASC19-254ENST00000641719 CDCA7LQ96GN5 454 aa14.15□□□□□ -0.14
CASC19-254ENST00000641719 TOPBP1Q92547 1522 aa14.15□□□□□ -0.14
CASC19-254ENST00000641719 CUX2O14529 1486 aa14.15□□□□□ -0.14
CASC19-254ENST00000641719 CLIP1P30622 1438 aa14.13□□□□□ -0.15
CASC19-254ENST00000641719 GRXCR2A6NFK2 248 aa14.13□□□□□ -0.15
CASC19-254ENST00000641719 OSBPP22059 807 aa14.13□□□□□ -0.15
CASC19-254ENST00000641719 WBP1LQ9NX94 342 aa14.13□□□□□ -0.15
CASC19-254ENST00000641719 IGF1RP08069 1367 aa14.11□□□□□ -0.15
CASC19-254ENST00000641719 ABCA10Q8WWZ4 1543 aa14.11□□□□□ -0.15
CASC19-254ENST00000641719 NBPF26B4DH59 902 aa14.1□□□□□ -0.15
CASC19-254ENST00000641719 POLA1P09884 1462 aaPredicted RBP14.1□□□□□ -0.15
CASC19-254ENST00000641719 PRIM1P49642 420 aaKnown RBP14.08□□□□□ -0.15
CASC19-254ENST00000641719 ARHGEF1Q92888 912 aaKnown RBP14.08□□□□□ -0.15
CASC19-254ENST00000641719 HPS5Q9UPZ3 1129 aa14.08□□□□□ -0.15
CASC19-254ENST00000641719 URB2Q14146 1524 aaKnown RBP14.08□□□□□ -0.16
CASC19-254ENST00000641719 HRCP23327 699 aa14.07□□□□□ -0.16
CASC19-254ENST00000641719 KCNC4Q03721 635 aa14.07□□□□□ -0.16
CASC19-254ENST00000641719 TATDN2Q93075 761 aa14.06□□□□□ -0.16
CASC19-254ENST00000641719 CARMIL1Q5VZK9 1371 aa14.05□□□□□ -0.16
CASC19-254ENST00000641719 VPS8Q8N3P4 1428 aa14.05□□□□□ -0.16
CASC19-254ENST00000641719 PPP4CP60510 307 aa14.04□□□□□ -0.16
CASC19-254ENST00000641719 FAM198AQ9UFP1 575 aa14.04□□□□□ -0.16
CASC19-254ENST00000641719 RAD54L2Q9Y4B4 1467 aa14.03□□□□□ -0.16
CASC19-254ENST00000641719 TTC13Q8NBP0 860 aa14.02□□□□□ -0.16
CASC19-254ENST00000641719 NECTIN2Q92692 538 aa14.02□□□□□ -0.16
CASC19-254ENST00000641719 PNMA3Q9UL41 463 aa14.02□□□□□ -0.16
CASC19-254ENST00000641719 HDGFP51858 240 aaKnown RBP14□□□□□ -0.17
CASC19-254ENST00000641719 SAMD7Q7Z3H4 446 aa13.99□□□□□ -0.17
CASC19-254ENST00000641719 CDHR5Q9HBB8 845 aa13.99□□□□□ -0.17
CASC19-254ENST00000641719 MRC2Q9UBG0 1479 aa13.98□□□□□ -0.17
CASC19-254ENST00000641719 IRX2Q9BZI1 471 aaPredicted RBP13.98□□□□□ -0.17
CASC19-254ENST00000641719 NPDC1Q9NQX5 325 aaPredicted RBP13.98□□□□□ -0.17
CASC19-254ENST00000641719 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
CASC19-254ENST00000641719 SMAPO00193 183 aa13.96□□□□□ -0.18
CASC19-254ENST00000641719 WDR97A6NE52 1622 aa13.95□□□□□ -0.18
CASC19-254ENST00000641719 NUDT18Q6ZVK8 323 aa13.95□□□□□ -0.18
CASC19-254ENST00000641719 TSHZ2Q9NRE2 1034 aa13.95□□□□□ -0.18
CASC19-254ENST00000641719 CUL7Q14999 1698 aa13.95□□□□□ -0.18
CASC19-254ENST00000641719 PPARGC1BQ86YN6 1023 aaKnown RBP13.94□□□□□ -0.18
CASC19-254ENST00000641719 ARAP1Q96P48 1450 aa13.94□□□□□ -0.18
CASC19-254ENST00000641719 C3orf80F5H4A9 247 aa13.92□□□□□ -0.18
CASC19-254ENST00000641719 P3H3Q8IVL6 736 aa13.92□□□□□ -0.18
CASC19-254ENST00000641719 GAPVD1Q14C86 1478 aa13.92□□□□□ -0.18
CASC19-254ENST00000641719 ABCA5Q8WWZ7 1642 aa13.92□□□□□ -0.18
CASC19-254ENST00000641719 TJAP1Q5JTD0 557 aa13.9□□□□□ -0.18
CASC19-254ENST00000641719 PADI6Q6TGC4 694 aa13.9□□□□□ -0.18
CASC19-254ENST00000641719 KCNV2Q8TDN2 545 aa13.9□□□□□ -0.18
CASC19-254ENST00000641719 TARBP1Q13395 1621 aaKnown RBP13.9□□□□□ -0.18
CASC19-254ENST00000641719 ARHGAP35Q9NRY4 1499 aa13.9□□□□□ -0.18
CASC19-254ENST00000641719 TDRD9Q8NDG6 1382 aaKnown RBP13.9□□□□□ -0.18
CASC19-254ENST00000641719 SLC4A3P48751 1232 aa13.9□□□□□ -0.19
CASC19-254ENST00000641719 SLF2Q8IX21 1173 aa13.9□□□□□ -0.19
CASC19-254ENST00000641719 RANGAP1P46060 587 aaPredicted RBP13.89□□□□□ -0.19
CASC19-254ENST00000641719 IL21Q9HBE4 155 aa13.89□□□□□ -0.19
CASC19-254ENST00000641719 WDR62O43379 1518 aa13.88□□□□□ -0.19
CASC19-254ENST00000641719 ZEB1P37275 1124 aaPredicted RBP13.88□□□□□ -0.19
CASC19-254ENST00000641719 EYA1Q99502 592 aa13.87□□□□□ -0.19
CASC19-254ENST00000641719 IFT140Q96RY7 1462 aa13.87□□□□□ -0.19
CASC19-254ENST00000641719 MLLT3P42568 568 aaPredicted RBP13.84□□□□□ -0.19
CASC19-254ENST00000641719 PTGDRQ13258 359 aa13.84□□□□□ -0.19
CASC19-254ENST00000641719 PRR14Q9BWN1 585 aa13.84□□□□□ -0.19
CASC19-254ENST00000641719 MTRQ99707 1265 aa13.83□□□□□ -0.2
CASC19-254ENST00000641719 ERCC6Q03468 1493 aa13.83□□□□□ -0.2
CASC19-254ENST00000641719 EFCAB5A4FU69 1503 aa13.82□□□□□ -0.2
CASC19-254ENST00000641719 FHAD1B1AJZ9 1412 aa13.81□□□□□ -0.2
CASC19-254ENST00000641719 LAPTM4AQ15012 233 aa13.81□□□□□ -0.2
CASC19-254ENST00000641719 SWT1Q5T5J6 900 aaKnown RBP13.81□□□□□ -0.2
CASC19-254ENST00000641719 GRIN2BQ13224 1484 aa13.8□□□□□ -0.2
CASC19-254ENST00000641719 APLP1P51693 650 aa13.8□□□□□ -0.2
CASC19-254ENST00000641719 MAP3K1Q13233 1512 aa13.79□□□□□ -0.2
CASC19-254ENST00000641719 TTBK1Q5TCY1 1321 aaPredicted RBP13.78□□□□□ -0.2
CASC19-254ENST00000641719 RNF40O75150 1001 aa13.78□□□□□ -0.2
CASC19-254ENST00000641719 RBM46Q8TBY0 533 aaKnown RBP13.78□□□□□ -0.2
CASC19-254ENST00000641719 DNAJB2P25686 324 aa13.76□□□□□ -0.21
CASC19-254ENST00000641719 AQRO60306 1485 aaKnown RBP eCLIP13.76□□□□□ -0.213e-6■■■■□ 24.7
CASC19-254ENST00000641719 CTTNBP2Q8WZ74 1663 aa13.76□□□□□ -0.21
CASC19-254ENST00000641719 THOC2Q8NI27 1593 aaKnown RBP13.75□□□□□ -0.21
CASC19-254ENST00000641719 V9GY48 417 aaPredicted RBP13.74□□□□□ -0.21
CASC19-254ENST00000641719 ADAMTS12P58397 1594 aa13.73□□□□□ -0.21
CASC19-254ENST00000641719 PBRM1Q86U86 1689 aa13.73□□□□□ -0.21
CASC19-254ENST00000641719 ADGRG1Q9Y653 693 aa13.73□□□□□ -0.21
CASC19-254ENST00000641719 FCHSD2O94868 740 aa13.72□□□□□ -0.21
CASC19-254ENST00000641719 PPP1R18Q6NYC8 613 aa13.72□□□□□ -0.21
CASC19-254ENST00000641719 TMUB1Q9BVT8 246 aa13.72□□□□□ -0.21
CASC19-254ENST00000641719 TMEM134Q9H6X4 195 aa13.72□□□□□ -0.21
CASC19-254ENST00000641719 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.72□□□□□ -0.21
CASC19-254ENST00000641719 FMN1Q68DA7 1419 aa13.71□□□□□ -0.21
CASC19-254ENST00000641719 GGCXP38435 758 aa13.71□□□□□ -0.22
CASC19-254ENST00000641719 KANK4Q5T7N3 995 aaPredicted RBP13.71□□□□□ -0.22
CASC19-254ENST00000641719 CASKIN1Q8WXD9 1431 aa13.71□□□□□ -0.22
CASC19-254ENST00000641719 FYCO1Q9BQS8 1478 aa13.7□□□□□ -0.22
CASC19-254ENST00000641719 ZNF608Q9ULD9 1512 aaPredicted RBP13.7□□□□□ -0.22
CASC19-254ENST00000641719 NUTM2FA1L443 756 aa13.69□□□□□ -0.22
CASC19-254ENST00000641719 TIAM1Q13009 1591 aa13.69□□□□□ -0.22
CASC19-254ENST00000641719 FHOD3Q2V2M9 1422 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms