RNA–Protein interactions for RNA: ENST00000625668.2

LINC02028-223, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 646 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-223	ENST00000625668	C3orf80	F5H4A9	247 aa		11.89	□□□□□ -0.51
LINC02028-223	ENST00000625668	CUX1	P39880	1505 aa		11.88	□□□□□ -0.51
LINC02028-223	ENST00000625668	PPP4C	P60510	307 aa		11.88	□□□□□ -0.51
LINC02028-223	ENST00000625668	SAMD7	Q7Z3H4	446 aa		11.88	□□□□□ -0.51
LINC02028-223	ENST00000625668	TATDN2	Q93075	761 aa		11.88	□□□□□ -0.51
LINC02028-223	ENST00000625668	NBPF26	B4DH59	902 aa		11.86	□□□□□ -0.51
LINC02028-223	ENST00000625668	CDHR5	Q9HBB8	845 aa		11.86	□□□□□ -0.51
LINC02028-223	ENST00000625668	RBM27	Q9P2N5	1060 aa	Known RBP	11.86	□□□□□ -0.51
LINC02028-223	ENST00000625668	POLA1	P09884	1462 aa	Predicted RBP	11.85	□□□□□ -0.51
LINC02028-223	ENST00000625668	IFT140	Q96RY7	1462 aa		11.85	□□□□□ -0.51
LINC02028-223	ENST00000625668	PNMA3	Q9UL41	463 aa		11.85	□□□□□ -0.51
LINC02028-223	ENST00000625668	FGD5	Q6ZNL6	1462 aa		11.83	□□□□□ -0.52
LINC02028-223	ENST00000625668	TJAP1	Q5JTD0	557 aa		11.83	□□□□□ -0.52
LINC02028-223	ENST00000625668	TTC13	Q8NBP0	860 aa		11.82	□□□□□ -0.52
LINC02028-223	ENST00000625668	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.82	□□□□□ -0.52
LINC02028-223	ENST00000625668	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.81	□□□□□ -0.52
LINC02028-223	ENST00000625668	NUDT18	Q6ZVK8	323 aa		11.81	□□□□□ -0.52
LINC02028-223	ENST00000625668	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.81	□□□□□ -0.52
LINC02028-223	ENST00000625668	TARBP1	Q13395	1621 aa	Known RBP	11.8	□□□□□ -0.52
LINC02028-223	ENST00000625668	SYNJ1	O43426	1573 aa		11.79	□□□□□ -0.52
LINC02028-223	ENST00000625668	RAD54L2	Q9Y4B4	1467 aa		11.79	□□□□□ -0.52
LINC02028-223	ENST00000625668	SOGA1	O94964	1423 aa		11.77	□□□□□ -0.52
LINC02028-223	ENST00000625668	TOP2B	Q02880	1626 aa		11.77	□□□□□ -0.53
LINC02028-223	ENST00000625668	BIVM-ERCC5	R4GMW8	1640 aa		11.77	□□□□□ -0.53
LINC02028-223	ENST00000625668	EIF4G3	O43432	1585 aa	Known RBP	11.76	□□□□□ -0.53
LINC02028-223	ENST00000625668	MTR	Q99707	1265 aa		11.76	□□□□□ -0.53
LINC02028-223	ENST00000625668	IL21	Q9HBE4	155 aa		11.76	□□□□□ -0.53
LINC02028-223	ENST00000625668	PADI6	Q6TGC4	694 aa		11.75	□□□□□ -0.53
LINC02028-223	ENST00000625668	HDGF	P51858	240 aa	Known RBP	11.74	□□□□□ -0.53
LINC02028-223	ENST00000625668	AQR	O60306	1485 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
LINC02028-223	ENST00000625668	TDRD9	Q8NDG6	1382 aa	Known RBP	11.72	□□□□□ -0.53
LINC02028-223	ENST00000625668	APLP1	P51693	650 aa		11.72	□□□□□ -0.53
LINC02028-223	ENST00000625668	ARHGEF1	Q92888	912 aa	Known RBP	11.72	□□□□□ -0.53
LINC02028-223	ENST00000625668	WDR97	A6NE52	1622 aa		11.71	□□□□□ -0.53
LINC02028-223	ENST00000625668	ABCA10	Q8WWZ4	1543 aa		11.7	□□□□□ -0.54
LINC02028-223	ENST00000625668	RNF40	O75150	1001 aa		11.7	□□□□□ -0.54
LINC02028-223	ENST00000625668	SWT1	Q5T5J6	900 aa	Known RBP	11.7	□□□□□ -0.54
LINC02028-223	ENST00000625668	ZNF516	Q92618	1163 aa		11.7	□□□□□ -0.54
LINC02028-223	ENST00000625668	EYA1	Q99502	592 aa		11.7	□□□□□ -0.54
LINC02028-223	ENST00000625668	MLLT3	P42568	568 aa	Predicted RBP	11.69	□□□□□ -0.54
LINC02028-223	ENST00000625668		Q6ZNB5	142 aa		11.69	□□□□□ -0.54
LINC02028-223	ENST00000625668	NECTIN2	Q92692	538 aa		11.69	□□□□□ -0.54
LINC02028-223	ENST00000625668	TSHZ2	Q9NRE2	1034 aa		11.69	□□□□□ -0.54
LINC02028-223	ENST00000625668	PPP1R18	Q6NYC8	613 aa		11.68	□□□□□ -0.54
LINC02028-223	ENST00000625668	SLF2	Q8IX21	1173 aa		11.68	□□□□□ -0.54
LINC02028-223	ENST00000625668	LAPTM4A	Q15012	233 aa		11.67	□□□□□ -0.54
LINC02028-223	ENST00000625668	RIMBP3C	A6NJZ7	1639 aa		11.67	□□□□□ -0.54
LINC02028-223	ENST00000625668	RIMBP3B	A6NNM3	1639 aa		11.67	□□□□□ -0.54
LINC02028-223	ENST00000625668	ABCA5	Q8WWZ7	1642 aa		11.67	□□□□□ -0.54
LINC02028-223	ENST00000625668	RIMBP3	Q9UFD9	1639 aa		11.67	□□□□□ -0.54
LINC02028-223	ENST00000625668	KCNV2	Q8TDN2	545 aa		11.66	□□□□□ -0.54
LINC02028-223	ENST00000625668	GAPVD1	Q14C86	1478 aa		11.65	□□□□□ -0.54
LINC02028-223	ENST00000625668	PRKD2	Q9BZL6	878 aa		11.65	□□□□□ -0.54
LINC02028-223	ENST00000625668	GRIN2B	Q13224	1484 aa		11.64	□□□□□ -0.55
LINC02028-223	ENST00000625668	SNAPC4	Q5SXM2	1469 aa		11.64	□□□□□ -0.55
LINC02028-223	ENST00000625668	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.63	□□□□□ -0.55
LINC02028-223	ENST00000625668		V9GY48	417 aa	Predicted RBP	11.63	□□□□□ -0.55
LINC02028-223	ENST00000625668	GFRA3	O60609	400 aa		11.62	□□□□□ -0.55
LINC02028-223	ENST00000625668	PTGDR	Q13258	359 aa		11.62	□□□□□ -0.55
LINC02028-223	ENST00000625668	NKX2-3	Q8TAU0	364 aa		11.62	□□□□□ -0.55
LINC02028-223	ENST00000625668	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.61	□□□□□ -0.55
LINC02028-223	ENST00000625668	PBRM1	Q86U86	1689 aa		11.6	□□□□□ -0.55
LINC02028-223	ENST00000625668	LCE2B	O14633	110 aa		11.6	□□□□□ -0.55
LINC02028-223	ENST00000625668	SLC4A3	P48751	1232 aa		11.59	□□□□□ -0.55
LINC02028-223	ENST00000625668	COPS2	P61201	443 aa		11.59	□□□□□ -0.55
LINC02028-223	ENST00000625668	SYNJ2	O15056	1496 aa		11.57	□□□□□ -0.56
LINC02028-223	ENST00000625668	DNAJB2	P25686	324 aa		11.57	□□□□□ -0.56
LINC02028-223	ENST00000625668	PRR14	Q9BWN1	585 aa		11.57	□□□□□ -0.56
LINC02028-223	ENST00000625668	ERICH3	Q5RHP9	1530 aa		11.56	□□□□□ -0.56
LINC02028-223	ENST00000625668	ZPR1	O75312	459 aa		11.56	□□□□□ -0.56
LINC02028-223	ENST00000625668	ADAMTS12	P58397	1594 aa		11.56	□□□□□ -0.56
LINC02028-223	ENST00000625668	ADGRG1	Q9Y653	693 aa		11.56	□□□□□ -0.56
LINC02028-223	ENST00000625668	ARHGEF11	O15085	1522 aa		11.55	□□□□□ -0.56
LINC02028-223	ENST00000625668	KIF27	Q86VH2	1401 aa		11.55	□□□□□ -0.56
LINC02028-223	ENST00000625668	RBM46	Q8TBY0	533 aa	Known RBP	11.55	□□□□□ -0.56
LINC02028-223	ENST00000625668	TMUB1	Q9BVT8	246 aa		11.55	□□□□□ -0.56
LINC02028-223	ENST00000625668	TMEM134	Q9H6X4	195 aa		11.55	□□□□□ -0.56
LINC02028-223	ENST00000625668	CHD1	O14646	1710 aa		11.55	□□□□□ -0.56
LINC02028-223	ENST00000625668	NRG2	O14511	850 aa	Predicted RBP	11.54	□□□□□ -0.56
LINC02028-223	ENST00000625668	GGCX	P38435	758 aa		11.54	□□□□□ -0.56
LINC02028-223	ENST00000625668	TRAF7	Q6Q0C0	670 aa		11.54	□□□□□ -0.56
LINC02028-223	ENST00000625668	PCDHB3	Q9Y5E6	796 aa		11.54	□□□□□ -0.56
LINC02028-223	ENST00000625668	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.53	□□□□□ -0.56
LINC02028-223	ENST00000625668	FHAD1	B1AJZ9	1412 aa		11.52	□□□□□ -0.57
LINC02028-223	ENST00000625668	GRIN2A	Q12879	1464 aa		11.51	□□□□□ -0.57
LINC02028-223	ENST00000625668	NUTM2F	A1L443	756 aa		11.5	□□□□□ -0.57
LINC02028-223	ENST00000625668	RCCD1	A6NED2	376 aa		11.5	□□□□□ -0.57
LINC02028-223	ENST00000625668	BLOC1S3	Q6QNY0	202 aa		11.5	□□□□□ -0.57
LINC02028-223	ENST00000625668	P3H3	Q8IVL6	736 aa		11.5	□□□□□ -0.57
LINC02028-223	ENST00000625668	IGF1R	P08069	1367 aa		11.49	□□□□□ -0.57
LINC02028-223	ENST00000625668	ACTN4	O43707	911 aa	Known RBP	11.48	□□□□□ -0.57
LINC02028-223	ENST00000625668	FAM161A	Q3B820	660 aa		11.48	□□□□□ -0.57
LINC02028-223	ENST00000625668	CLASP1	Q7Z460	1538 aa		11.48	□□□□□ -0.57
LINC02028-223	ENST00000625668	RUSC2	Q8N2Y8	1516 aa		11.48	□□□□□ -0.57
LINC02028-223	ENST00000625668	SEMA3E	O15041	775 aa		11.47	□□□□□ -0.57
LINC02028-223	ENST00000625668	FCHSD2	O94868	740 aa		11.47	□□□□□ -0.57
LINC02028-223	ENST00000625668	PDZRN3	Q9UPQ7	1066 aa		11.46	□□□□□ -0.57
LINC02028-223	ENST00000625668	CUL7	Q14999	1698 aa		11.46	□□□□□ -0.58
LINC02028-223	ENST00000625668	RNF223	E7ERA6	249 aa		11.45	□□□□□ -0.58
LINC02028-223	ENST00000625668	KMT5B	Q4FZB7	885 aa		11.45	□□□□□ -0.58

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