RNA–Protein interactions for RNA: ENST00000625668.2

LINC02028-223, Transcript of long intergenic non-protein coding RNA 2028, humanhuman

TSL 5

Gene LINC02028, Length 646 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02028-223ENST00000625668 AEBP2Q6ZN18 517 aaPredicted RBP30.3■■■□□ 2.44
LINC02028-223ENST00000625668 CHIC1Q5VXU3 224 aa28.76■■■□□ 2.19
LINC02028-223ENST00000625668 SENP3Q9H4L4 574 aaPredicted RBP25.83■■□□□ 1.73
LINC02028-223ENST00000625668 PHF23Q9BUL5 403 aaPredicted RBP25.5■■□□□ 1.67
LINC02028-223ENST00000625668 FOXD1Q16676 465 aa24.09■■□□□ 1.45
LINC02028-223ENST00000625668 PLPPR3Q6T4P5 718 aa22.96■■□□□ 1.27
LINC02028-223ENST00000625668 MSH5O43196 834 aa22.54■■□□□ 1.2
LINC02028-223ENST00000625668 PPP6R1Q9UPN7 881 aa22.52■■□□□ 1.2
LINC02028-223ENST00000625668 PIAS4Q8N2W9 510 aaPredicted RBP22.47■■□□□ 1.19
LINC02028-223ENST00000625668 ADRA2BP18089 450 aa22.42■■□□□ 1.18
LINC02028-223ENST00000625668 POTEDQ86YR6 584 aa22.02■■□□□ 1.12
LINC02028-223ENST00000625668 MAPK8IP2Q13387 824 aaPredicted RBP20.6■□□□□ 0.89
LINC02028-223ENST00000625668 SCAF1Q9H7N4 1312 aaKnown RBP20.52■□□□□ 0.87
LINC02028-223ENST00000625668 DMRT2Q9Y5R5 561 aa20.5■□□□□ 0.87
LINC02028-223ENST00000625668 PPP4R3CPQ6ZMV5 832 aa20.12■□□□□ 0.81
LINC02028-223ENST00000625668 HOXD11P31277 338 aaPredicted RBP19.76■□□□□ 0.75
LINC02028-223ENST00000625668 CNKSR2Q8WXI2 1034 aa19.75■□□□□ 0.75
LINC02028-223ENST00000625668 RNF216Q9NWF9 866 aaPredicted RBP19.59■□□□□ 0.73
LINC02028-223ENST00000625668 DCAF8L1A6NGE4 600 aa19.57■□□□□ 0.72
LINC02028-223ENST00000625668 NCBP3Q53F19 620 aaKnown RBP19.33■□□□□ 0.68
LINC02028-223ENST00000625668 CACNB1Q02641 598 aaPredicted RBP19.32■□□□□ 0.68
LINC02028-223ENST00000625668 RNF39Q9H2S5 420 aa19.25■□□□□ 0.67
LINC02028-223ENST00000625668 DNAJC5BQ9UF47 199 aa19.11■□□□□ 0.65
LINC02028-223ENST00000625668 NPM3O75607 178 aaKnown RBP19.07■□□□□ 0.64
LINC02028-223ENST00000625668 C1QBPQ07021 282 aaKnown RBP18.96■□□□□ 0.63
LINC02028-223ENST00000625668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.75■□□□□ 0.59
LINC02028-223ENST00000625668 KCNA4P22459 653 aa18.69■□□□□ 0.58
LINC02028-223ENST00000625668 U3KPZ7 1027 aaPredicted RBP18.4■□□□□ 0.54
LINC02028-223ENST00000625668 SLC4A2P04920 1241 aa18.24■□□□□ 0.51
LINC02028-223ENST00000625668 SPINK5Q9NQ38 1064 aaPredicted RBP18.12■□□□□ 0.49
LINC02028-223ENST00000625668 CAPN15O75808 1086 aa18.06■□□□□ 0.48
LINC02028-223ENST00000625668 DSG3P32926 999 aa18.01■□□□□ 0.47
LINC02028-223ENST00000625668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.86■□□□□ 0.45
LINC02028-223ENST00000625668 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
LINC02028-223ENST00000625668 APLP2Q06481 763 aa17.85■□□□□ 0.45
LINC02028-223ENST00000625668 TRHP20396 242 aaPredicted RBP17.77■□□□□ 0.44
LINC02028-223ENST00000625668 ZNF219Q9P2Y4 722 aaPredicted RBP17.77■□□□□ 0.44
LINC02028-223ENST00000625668 SAMD1Q6SPF0 538 aaPredicted RBP17.76■□□□□ 0.43
LINC02028-223ENST00000625668 ABCB7O75027 752 aa17.65■□□□□ 0.42
LINC02028-223ENST00000625668 MYCNP04198 464 aaPredicted RBP17.63■□□□□ 0.41
LINC02028-223ENST00000625668 SLC4A1APQ9BWU0 796 aaKnown RBP17.62■□□□□ 0.41
LINC02028-223ENST00000625668 FOXD4L1Q9NU39 408 aa17.44■□□□□ 0.38
LINC02028-223ENST00000625668 POLA2Q14181 598 aa17.32■□□□□ 0.36
LINC02028-223ENST00000625668 POTEHQ6S545 545 aa17.25■□□□□ 0.35
LINC02028-223ENST00000625668 ATF5Q9Y2D1 282 aaPredicted RBP17.24■□□□□ 0.35
LINC02028-223ENST00000625668 ZBTB22O15209 634 aa17.2■□□□□ 0.34
LINC02028-223ENST00000625668 RBM42Q9BTD8 480 aaKnown RBP17.16■□□□□ 0.34
LINC02028-223ENST00000625668 ZBTB12Q9Y330 459 aaPredicted RBP16.97■□□□□ 0.31
LINC02028-223ENST00000625668 ATXN8OSP0DMR3 200 aa16.93■□□□□ 0.3
LINC02028-223ENST00000625668 CHRDL2Q6WN34 429 aa16.8■□□□□ 0.28
LINC02028-223ENST00000625668 AKT1S1Q96B36 256 aa16.78■□□□□ 0.28
LINC02028-223ENST00000625668 OSCARQ8IYS5 282 aa16.75■□□□□ 0.27
LINC02028-223ENST00000625668 REM2Q8IYK8 340 aaPredicted RBP16.62■□□□□ 0.25
LINC02028-223ENST00000625668 FBLN2P98095 1184 aa16.52■□□□□ 0.24
LINC02028-223ENST00000625668 SPDYE2BA6NHP3 402 aa16.46■□□□□ 0.23
LINC02028-223ENST00000625668 SPDYE6P0CI01 402 aa16.46■□□□□ 0.23
LINC02028-223ENST00000625668 SPDYE2Q495Y8 402 aa16.46■□□□□ 0.23
LINC02028-223ENST00000625668 MKRN4PQ13434 485 aaPredicted RBP16.45■□□□□ 0.22
LINC02028-223ENST00000625668 PITPNM1O00562 1244 aa16.44■□□□□ 0.22
LINC02028-223ENST00000625668 NISCHQ9Y2I1 1504 aa16.41■□□□□ 0.22
LINC02028-223ENST00000625668 PIP4P2Q8N4L2 257 aa16.41■□□□□ 0.22
LINC02028-223ENST00000625668 CSRNP3Q8WYN3 585 aa16.39■□□□□ 0.21
LINC02028-223ENST00000625668 FXR2P51116 673 aaKnown RBP eCLIP16.32■□□□□ 0.2
LINC02028-223ENST00000625668 SSUH2Q9Y2M2 353 aa16.25■□□□□ 0.19
LINC02028-223ENST00000625668 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
LINC02028-223ENST00000625668 SPDYE1Q8NFV5 336 aaPredicted RBP16.16■□□□□ 0.18
LINC02028-223ENST00000625668 SP7Q8TDD2 431 aaPredicted RBP16.16■□□□□ 0.18
LINC02028-223ENST00000625668 EHMT2Q96KQ7 1210 aa16.09■□□□□ 0.17
LINC02028-223ENST00000625668 CLEC11AQ9Y240 323 aa16.09■□□□□ 0.17
LINC02028-223ENST00000625668 HAX1O00165 279 aa16.08■□□□□ 0.16
LINC02028-223ENST00000625668 PRKAR2AP13861 404 aaKnown RBP16■□□□□ 0.15
LINC02028-223ENST00000625668 PABPN1Q86U42 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
LINC02028-223ENST00000625668 EVX2Q03828 476 aa15.92■□□□□ 0.14
LINC02028-223ENST00000625668 PRR29P0C7W0 189 aa15.85■□□□□ 0.13
LINC02028-223ENST00000625668 CHADLQ6NUI6 762 aa15.81■□□□□ 0.12
LINC02028-223ENST00000625668 C19orf67A6NJJ6 358 aa15.8■□□□□ 0.12
LINC02028-223ENST00000625668 SPDYE4A6NLX3 237 aa15.63■□□□□ 0.09
LINC02028-223ENST00000625668 FARP1Q9Y4F1 1045 aaPredicted RBP15.6■□□□□ 0.09
LINC02028-223ENST00000625668 STAG3Q9UJ98 1225 aa15.56■□□□□ 0.08
LINC02028-223ENST00000625668 GABBR2O75899 941 aa15.55■□□□□ 0.08
LINC02028-223ENST00000625668 CD44P16070 742 aaKnown RBP15.49■□□□□ 0.07
LINC02028-223ENST00000625668 CREBZFQ9NS37 354 aa15.48■□□□□ 0.07
LINC02028-223ENST00000625668 CLCN6P51797 869 aa15.33■□□□□ 0.04
LINC02028-223ENST00000625668 PROM2Q8N271 834 aa15.33■□□□□ 0.04
LINC02028-223ENST00000625668 ZNF579Q8NAF0 562 aaKnown RBP15.28■□□□□ 0.04
LINC02028-223ENST00000625668 ZRANB1Q9UGI0 708 aa15.26■□□□□ 0.03
LINC02028-223ENST00000625668 MNX1P50219 401 aaPredicted RBP15.25■□□□□ 0.03
LINC02028-223ENST00000625668 POTEIP0CG38 1075 aa15.24■□□□□ 0.03
LINC02028-223ENST00000625668 NPM1P06748 294 aaKnown RBP eCLIP15.17■□□□□ 0.02
LINC02028-223ENST00000625668 LHX8Q68G74 356 aa15.15■□□□□ 0.02
LINC02028-223ENST00000625668 PAK3O75914 559 aaPredicted RBP15.12■□□□□ 0.01
LINC02028-223ENST00000625668 DCBLD2Q96PD2 775 aa15.1■□□□□ 0.01
LINC02028-223ENST00000625668 GALR2O43603 387 aaPredicted RBP15.08■□□□□ 0
LINC02028-223ENST00000625668 PHF12Q96QT6 1004 aa15.05■□□□□ -0
LINC02028-223ENST00000625668 MIER1Q8N108 512 aa14.9□□□□□ -0.02
LINC02028-223ENST00000625668 TSPYL2Q9H2G4 693 aaPredicted RBP14.88□□□□□ -0.03
LINC02028-223ENST00000625668 PLEKHG5O94827 1062 aa14.87□□□□□ -0.03
LINC02028-223ENST00000625668 MS4A3Q96HJ5 214 aa14.86□□□□□ -0.03
LINC02028-223ENST00000625668 CCDC61Q9Y6R9 512 aa14.86□□□□□ -0.03
LINC02028-223ENST00000625668 FKBP8Q14318 412 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms