RNA–Protein interactions for RNA: ENST00000561131.2

LRRC49-228, Transcript of leucine rich repeat containing 49, humanhuman

TSL 3

Gene LRRC49, Length 738 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-228ENST00000561131 TOPBP1Q92547 1522 aa8.88□□□□□ -0.99
LRRC49-228ENST00000561131 PPP1R3GB7ZBB8 358 aa8.87□□□□□ -0.99
LRRC49-228ENST00000561131 PROX2Q3B8N5 592 aa8.87□□□□□ -0.99
LRRC49-228ENST00000561131 HPS5Q9UPZ3 1129 aa8.87□□□□□ -0.99
LRRC49-228ENST00000561131 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.86□□□□□ -0.99
LRRC49-228ENST00000561131 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.86□□□□□ -0.99
LRRC49-228ENST00000561131 GRXCR2A6NFK2 248 aa8.85□□□□□ -0.99
LRRC49-228ENST00000561131 MYT1Q01538 1121 aa8.85□□□□□ -0.99
LRRC49-228ENST00000561131 WDR97A6NE52 1622 aa8.84□□□□□ -0.99
LRRC49-228ENST00000561131 DGAT1O75907 488 aa8.84□□□□□ -0.99
LRRC49-228ENST00000561131 NBR1Q14596 966 aa8.84□□□□□ -0.99
LRRC49-228ENST00000561131 LRCH3Q96II8 777 aa8.84□□□□□ -0.99
LRRC49-228ENST00000561131 WFS1O76024 890 aa8.83□□□□□ -1
LRRC49-228ENST00000561131 KIAA1468Q9P260 1216 aa8.82□□□□□ -1
LRRC49-228ENST00000561131 EIF4G3O43432 1585 aaKnown RBP8.82□□□□□ -1
LRRC49-228ENST00000561131 EN1Q05925 392 aaPredicted RBP8.81□□□□□ -1
LRRC49-228ENST00000561131 RBM33Q96EV2 1170 aaKnown RBP8.81□□□□□ -1
LRRC49-228ENST00000561131 TARBP1Q13395 1621 aaKnown RBP8.8□□□□□ -1
LRRC49-228ENST00000561131 MAP3K7O43318 606 aa8.8□□□□□ -1
LRRC49-228ENST00000561131 SLC24A1O60721 1099 aa8.8□□□□□ -1
LRRC49-228ENST00000561131 TJAP1Q5JTD0 557 aa8.8□□□□□ -1
LRRC49-228ENST00000561131 C6orf132Q5T0Z8 1188 aa8.8□□□□□ -1
LRRC49-228ENST00000561131 SMYD5Q6GMV2 418 aa8.8□□□□□ -1
LRRC49-228ENST00000561131 POLA1P09884 1462 aaPredicted RBP8.79□□□□□ -1
LRRC49-228ENST00000561131 SEMA3EO15041 775 aa8.79□□□□□ -1
LRRC49-228ENST00000561131 OSBPP22059 807 aa8.79□□□□□ -1
LRRC49-228ENST00000561131 IL21Q9HBE4 155 aa8.79□□□□□ -1
LRRC49-228ENST00000561131 GGCXP38435 758 aa8.78□□□□□ -1
LRRC49-228ENST00000561131 MLLT3P42568 568 aaPredicted RBP8.78□□□□□ -1
LRRC49-228ENST00000561131 PPP4CP60510 307 aa8.78□□□□□ -1
LRRC49-228ENST00000561131 SEPT9Q9UHD8 586 aaPredicted RBP8.78□□□□□ -1
LRRC49-228ENST00000561131 SUPT5HO00267 1087 aaKnown RBP8.77□□□□□ -1.01
LRRC49-228ENST00000561131 FAM98CQ17RN3 349 aaKnown RBP8.77□□□□□ -1.01
LRRC49-228ENST00000561131 ZNF608Q9ULD9 1512 aaPredicted RBP8.76□□□□□ -1.01
LRRC49-228ENST00000561131 TESPA1A2RU30 521 aaPredicted RBP8.76□□□□□ -1.01
LRRC49-228ENST00000561131 ONECUT3O60422 494 aaPredicted RBP8.76□□□□□ -1.01
LRRC49-228ENST00000561131 CERKQ8TCT0 537 aa8.76□□□□□ -1.01
LRRC49-228ENST00000561131 FGD5Q6ZNL6 1462 aa8.76□□□□□ -1.01
LRRC49-228ENST00000561131 SOGA1O94964 1423 aa8.75□□□□□ -1.01
LRRC49-228ENST00000561131 WIPF1O43516 503 aa8.75□□□□□ -1.01
LRRC49-228ENST00000561131 CUX1P39880 1505 aa8.75□□□□□ -1.01
LRRC49-228ENST00000561131 TULP1O00294 542 aaPredicted RBP8.74□□□□□ -1.01
LRRC49-228ENST00000561131 COL9A1P20849 921 aa8.74□□□□□ -1.01
LRRC49-228ENST00000561131 MTRQ99707 1265 aa8.74□□□□□ -1.01
LRRC49-228ENST00000561131 PRIM1P49642 420 aaKnown RBP8.73□□□□□ -1.01
LRRC49-228ENST00000561131 TSR1Q2NL82 804 aaKnown RBP8.73□□□□□ -1.01
LRRC49-228ENST00000561131 MAGI1Q96QZ7 1491 aaPredicted RBP8.72□□□□□ -1.01
LRRC49-228ENST00000561131 FAM181BA6NEQ2 426 aa8.72□□□□□ -1.01
LRRC49-228ENST00000561131 SUZ12Q15022 739 aaKnown RBP8.72□□□□□ -1.01
LRRC49-228ENST00000561131 CHD1O14646 1710 aa8.71□□□□□ -1.02
LRRC49-228ENST00000561131 AQRO60306 1485 aaKnown RBP eCLIP8.7□□□□□ -1.02
LRRC49-228ENST00000561131 GRIN2BQ13224 1484 aa8.7□□□□□ -1.02
LRRC49-228ENST00000561131 BIVM-ERCC5R4GMW8 1640 aa8.7□□□□□ -1.02
LRRC49-228ENST00000561131 FAM187AA6NFU0 413 aa8.7□□□□□ -1.02
LRRC49-228ENST00000561131 WRNQ14191 1432 aaPredicted RBP eCLIP8.7□□□□□ -1.02
LRRC49-228ENST00000561131 TOP2BQ02880 1626 aa8.69□□□□□ -1.02
LRRC49-228ENST00000561131 TRIM67Q6ZTA4 783 aa8.69□□□□□ -1.02
LRRC49-228ENST00000561131 RAD54L2Q9Y4B4 1467 aa8.69□□□□□ -1.02
LRRC49-228ENST00000561131 ABCA10Q8WWZ4 1543 aa8.69□□□□□ -1.02
LRRC49-228ENST00000561131 NUTM2FA1L443 756 aa8.68□□□□□ -1.02
LRRC49-228ENST00000561131 PRSS12P56730 875 aa8.68□□□□□ -1.02
LRRC49-228ENST00000561131 ABCA5Q8WWZ7 1642 aa8.68□□□□□ -1.02
LRRC49-228ENST00000561131 PBRM1Q86U86 1689 aa8.68□□□□□ -1.02
LRRC49-228ENST00000561131 TRIM6-TRIM34B2RNG4 842 aa8.67□□□□□ -1.02
LRRC49-228ENST00000561131 SYNJ2O15056 1496 aa8.67□□□□□ -1.02
LRRC49-228ENST00000561131 SYNJ1O43426 1573 aa8.67□□□□□ -1.02
LRRC49-228ENST00000561131 GAPVD1Q14C86 1478 aa8.67□□□□□ -1.02
LRRC49-228ENST00000561131 SNAPC4Q5SXM2 1469 aa8.67□□□□□ -1.02
LRRC49-228ENST00000561131 PACS2Q86VP3 889 aa8.67□□□□□ -1.02
LRRC49-228ENST00000561131 TDRD9Q8NDG6 1382 aaKnown RBP8.67□□□□□ -1.02
LRRC49-228ENST00000561131 TMUB1Q9BVT8 246 aa8.67□□□□□ -1.02
LRRC49-228ENST00000561131 CDHR5Q9HBB8 845 aa8.67□□□□□ -1.02
LRRC49-228ENST00000561131 RBM27Q9P2N5 1060 aaKnown RBP8.67□□□□□ -1.02
LRRC49-228ENST00000561131 ZNF516Q92618 1163 aa8.66□□□□□ -1.02
LRRC49-228ENST00000561131 CDCA7LQ96GN5 454 aa8.66□□□□□ -1.02
LRRC49-228ENST00000561131 RIMBP3CA6NJZ7 1639 aa8.65□□□□□ -1.02
LRRC49-228ENST00000561131 RIMBP3BA6NNM3 1639 aa8.65□□□□□ -1.02
LRRC49-228ENST00000561131 RIMBP3Q9UFD9 1639 aa8.65□□□□□ -1.02
LRRC49-228ENST00000561131 ARHGEF11O15085 1522 aa8.65□□□□□ -1.02
LRRC49-228ENST00000561131 FCHSD2O94868 740 aa8.65□□□□□ -1.02
LRRC49-228ENST00000561131 SLC19A1P41440 591 aa8.65□□□□□ -1.02
LRRC49-228ENST00000561131 PRR20EP86478 221 aa8.65□□□□□ -1.02
LRRC49-228ENST00000561131 PRR20CP86479 221 aa8.65□□□□□ -1.02
LRRC49-228ENST00000561131 PRR20DP86480 221 aa8.65□□□□□ -1.02
LRRC49-228ENST00000561131 PRR20BP86481 221 aa8.65□□□□□ -1.02
LRRC49-228ENST00000561131 PRR20AP86496 221 aa8.65□□□□□ -1.02
LRRC49-228ENST00000561131 RBM26Q5T8P6 1007 aaKnown RBP8.65□□□□□ -1.02
LRRC49-228ENST00000561131 NPDC1Q9NQX5 325 aaPredicted RBP8.65□□□□□ -1.02
LRRC49-228ENST00000561131 ST8SIA5O15466 376 aa8.64□□□□□ -1.03
LRRC49-228ENST00000561131 NFX1Q12986 1120 aaKnown RBP8.64□□□□□ -1.03
LRRC49-228ENST00000561131 PTGDRQ13258 359 aa8.64□□□□□ -1.03
LRRC49-228ENST00000561131 AAASQ9NRG9 546 aa8.64□□□□□ -1.03
LRRC49-228ENST00000561131 CHMP7Q8WUX9 453 aaPredicted RBP8.63□□□□□ -1.03
LRRC49-228ENST00000561131 TSKSQ9UJT2 592 aa8.62□□□□□ -1.03
LRRC49-228ENST00000561131 ERICH3Q5RHP9 1530 aa8.62□□□□□ -1.03
LRRC49-228ENST00000561131 CLASP1Q7Z460 1538 aa8.62□□□□□ -1.03
LRRC49-228ENST00000561131 NBPF26B4DH59 902 aa8.61□□□□□ -1.03
LRRC49-228ENST00000561131 C11orf95C9JLR9 678 aaPredicted RBP8.61□□□□□ -1.03
LRRC49-228ENST00000561131 NKX2-3Q8TAU0 364 aa8.61□□□□□ -1.03
LRRC49-228ENST00000561131 ADAMTS12P58397 1594 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms