RNA–Protein interactions for RNA: ENST00000561131.2

LRRC49-228, Transcript of leucine rich repeat containing 49, humanhuman

TSL 3

Gene LRRC49, Length 738 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-228ENST00000561131 AEBP2Q6ZN18 517 aaPredicted RBP24■■□□□ 1.43
LRRC49-228ENST00000561131 CHIC1Q5VXU3 224 aa22.6■■□□□ 1.21
LRRC49-228ENST00000561131 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
LRRC49-228ENST00000561131 PHF23Q9BUL5 403 aaPredicted RBP20.33■□□□□ 0.85
LRRC49-228ENST00000561131 POTEDQ86YR6 584 aa19.78■□□□□ 0.76
LRRC49-228ENST00000561131 FOXD1Q16676 465 aa19.4■□□□□ 0.7
LRRC49-228ENST00000561131 MSH5O43196 834 aa18.65■□□□□ 0.58
LRRC49-228ENST00000561131 PIAS4Q8N2W9 510 aaPredicted RBP17.97■□□□□ 0.47
LRRC49-228ENST00000561131 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
LRRC49-228ENST00000561131 ADRA2BP18089 450 aa17.27■□□□□ 0.36
LRRC49-228ENST00000561131 PLPPR3Q6T4P5 718 aa17.14■□□□□ 0.33
LRRC49-228ENST00000561131 CACNB1Q02641 598 aaPredicted RBP16.62■□□□□ 0.25
LRRC49-228ENST00000561131 DMRT2Q9Y5R5 561 aa16.27■□□□□ 0.2
LRRC49-228ENST00000561131 MAPK8IP2Q13387 824 aaPredicted RBP16.15■□□□□ 0.18
LRRC49-228ENST00000561131 SCAF1Q9H7N4 1312 aaKnown RBP15.97■□□□□ 0.15
LRRC49-228ENST00000561131 DCAF8L1A6NGE4 600 aa15.79■□□□□ 0.12
LRRC49-228ENST00000561131 RNF39Q9H2S5 420 aa15.73■□□□□ 0.11
LRRC49-228ENST00000561131 C1QBPQ07021 282 aaKnown RBP15.52■□□□□ 0.08
LRRC49-228ENST00000561131 POTEHQ6S545 545 aa15.35■□□□□ 0.05
LRRC49-228ENST00000561131 HOXD11P31277 338 aaPredicted RBP15.27■□□□□ 0.04
LRRC49-228ENST00000561131 DNAJC5BQ9UF47 199 aa14.97□□□□□ -0.01
LRRC49-228ENST00000561131 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
LRRC49-228ENST00000561131 PPP4R3CPQ6ZMV5 832 aa14.86□□□□□ -0.03
LRRC49-228ENST00000561131 CNKSR2Q8WXI2 1034 aa14.84□□□□□ -0.03
LRRC49-228ENST00000561131 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.67□□□□□ -0.06
LRRC49-228ENST00000561131 DSG3P32926 999 aa14.41□□□□□ -0.1
LRRC49-228ENST00000561131 CAPN15O75808 1086 aa14.36□□□□□ -0.11
LRRC49-228ENST00000561131 SPINK5Q9NQ38 1064 aaPredicted RBP14.22□□□□□ -0.13
LRRC49-228ENST00000561131 U3KPZ7 1027 aaPredicted RBP14.13□□□□□ -0.15
LRRC49-228ENST00000561131 NCBP3Q53F19 620 aaKnown RBP14.1□□□□□ -0.15
LRRC49-228ENST00000561131 SP7Q8TDD2 431 aaPredicted RBP13.93□□□□□ -0.18
LRRC49-228ENST00000561131 CHRDL2Q6WN34 429 aa13.91□□□□□ -0.18
LRRC49-228ENST00000561131 RBM42Q9BTD8 480 aaKnown RBP13.89□□□□□ -0.19
LRRC49-228ENST00000561131 ABCB7O75027 752 aa13.88□□□□□ -0.19
LRRC49-228ENST00000561131 TRHP20396 242 aaPredicted RBP13.88□□□□□ -0.19
LRRC49-228ENST00000561131 APLP2Q06481 763 aa13.83□□□□□ -0.2
LRRC49-228ENST00000561131 ZNF219Q9P2Y4 722 aaPredicted RBP13.83□□□□□ -0.2
LRRC49-228ENST00000561131 NPM3O75607 178 aaKnown RBP13.76□□□□□ -0.21
LRRC49-228ENST00000561131 KCNA4P22459 653 aa13.58□□□□□ -0.24
LRRC49-228ENST00000561131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.54□□□□□ -0.24
LRRC49-228ENST00000561131 HNRNPUL2Q1KMD3 747 aaKnown RBP13.54□□□□□ -0.24
LRRC49-228ENST00000561131 HAX1O00165 279 aa13.46□□□□□ -0.25
LRRC49-228ENST00000561131 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
LRRC49-228ENST00000561131 SLC4A2P04920 1241 aa13.34□□□□□ -0.27
LRRC49-228ENST00000561131 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
LRRC49-228ENST00000561131 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
LRRC49-228ENST00000561131 POLA2Q14181 598 aa13.25□□□□□ -0.29
LRRC49-228ENST00000561131 REM2Q8IYK8 340 aaPredicted RBP13.16□□□□□ -0.3
LRRC49-228ENST00000561131 PLSCR2Q9NRY7 297 aa13.13□□□□□ -0.31
LRRC49-228ENST00000561131 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
LRRC49-228ENST00000561131 LHX8Q68G74 356 aa13.07□□□□□ -0.32
LRRC49-228ENST00000561131 EVX2Q03828 476 aa13.05□□□□□ -0.32
LRRC49-228ENST00000561131 PITPNM1O00562 1244 aa13.01□□□□□ -0.33
LRRC49-228ENST00000561131 ZBTB12Q9Y330 459 aaPredicted RBP12.98□□□□□ -0.33
LRRC49-228ENST00000561131 SLC4A1APQ9BWU0 796 aaKnown RBP12.96□□□□□ -0.33
LRRC49-228ENST00000561131 OSCARQ8IYS5 282 aa12.84□□□□□ -0.35
LRRC49-228ENST00000561131 MYCNP04198 464 aaPredicted RBP12.81□□□□□ -0.36
LRRC49-228ENST00000561131 GABBR2O75899 941 aa12.78□□□□□ -0.36
LRRC49-228ENST00000561131 PRKAR2AP13861 404 aaKnown RBP12.72□□□□□ -0.37
LRRC49-228ENST00000561131 C19orf67A6NJJ6 358 aa12.71□□□□□ -0.37
LRRC49-228ENST00000561131 FOXD4L1Q9NU39 408 aa12.58□□□□□ -0.4
LRRC49-228ENST00000561131 CLEC11AQ9Y240 323 aa12.55□□□□□ -0.4
LRRC49-228ENST00000561131 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
LRRC49-228ENST00000561131 ATF5Q9Y2D1 282 aaPredicted RBP12.48□□□□□ -0.41
LRRC49-228ENST00000561131 ZBTB22O15209 634 aa12.46□□□□□ -0.41
LRRC49-228ENST00000561131 SPDYE2BA6NHP3 402 aa12.44□□□□□ -0.42
LRRC49-228ENST00000561131 SPDYE6P0CI01 402 aa12.44□□□□□ -0.42
LRRC49-228ENST00000561131 SPDYE2Q495Y8 402 aa12.44□□□□□ -0.42
LRRC49-228ENST00000561131 POTEIP0CG38 1075 aa12.42□□□□□ -0.42
LRRC49-228ENST00000561131 EHMT2Q96KQ7 1210 aa12.42□□□□□ -0.42
LRRC49-228ENST00000561131 POTEMA6NI47 508 aa12.37□□□□□ -0.43
LRRC49-228ENST00000561131 CLCN6P51797 869 aa12.35□□□□□ -0.43
LRRC49-228ENST00000561131 DCBLD2Q96PD2 775 aa12.34□□□□□ -0.43
LRRC49-228ENST00000561131 CHADLQ6NUI6 762 aa12.32□□□□□ -0.44
LRRC49-228ENST00000561131 CSRNP3Q8WYN3 585 aa12.32□□□□□ -0.44
LRRC49-228ENST00000561131 POTEGQ6S5H5 508 aa12.29□□□□□ -0.44
LRRC49-228ENST00000561131 PCDH10Q9P2E7 1040 aa12.28□□□□□ -0.44
LRRC49-228ENST00000561131 CD44P16070 742 aaKnown RBP12.26□□□□□ -0.45
LRRC49-228ENST00000561131 FBLN2P98095 1184 aa12.25□□□□□ -0.45
LRRC49-228ENST00000561131 PRR29P0C7W0 189 aa12.2□□□□□ -0.46
LRRC49-228ENST00000561131 ATXN8OSP0DMR3 200 aa12.2□□□□□ -0.46
LRRC49-228ENST00000561131 OTUD5Q96G74 571 aa12.2□□□□□ -0.46
LRRC49-228ENST00000561131 ZNF692Q9BU19 519 aaPredicted RBP12.16□□□□□ -0.46
LRRC49-228ENST00000561131 NISCHQ9Y2I1 1504 aa12.13□□□□□ -0.47
LRRC49-228ENST00000561131 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
LRRC49-228ENST00000561131 FARP1Q9Y4F1 1045 aaPredicted RBP12.06□□□□□ -0.48
LRRC49-228ENST00000561131 POTEB2H3BUK9 544 aa11.99□□□□□ -0.49
LRRC49-228ENST00000561131 ZNF579Q8NAF0 562 aaKnown RBP11.98□□□□□ -0.49
LRRC49-228ENST00000561131 ZRANB1Q9UGI0 708 aa11.95□□□□□ -0.5
LRRC49-228ENST00000561131 PABPN1Q86U42 306 aaKnown RBP eCLIP11.92□□□□□ -0.5
LRRC49-228ENST00000561131 GALR2O43603 387 aaPredicted RBP11.89□□□□□ -0.51
LRRC49-228ENST00000561131 MKRN4PQ13434 485 aaPredicted RBP11.85□□□□□ -0.51
LRRC49-228ENST00000561131 FAM163AQ96GL9 167 aaPredicted RBP11.85□□□□□ -0.51
LRRC49-228ENST00000561131 MAMSTRQ6ZN01 415 aa11.83□□□□□ -0.52
LRRC49-228ENST00000561131 PAK3O75914 559 aaPredicted RBP11.73□□□□□ -0.53
LRRC49-228ENST00000561131 LCE2DQ5TA82 110 aaPredicted RBP11.72□□□□□ -0.53
LRRC49-228ENST00000561131 METRNQ9UJH8 293 aa11.72□□□□□ -0.53
LRRC49-228ENST00000561131 PELP1Q8IZL8 1130 aaKnown RBP11.71□□□□□ -0.53
LRRC49-228ENST00000561131 SCUBE2Q9NQ36 999 aa11.7□□□□□ -0.54
LRRC49-228ENST00000561131 C7P10643 843 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms