RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Caskin1Q6P9K8 1431 aa15.66■□□□□ 0.1
Herc4-208ENSMUST00000219577 Atxn3Q9CVD2 355 aa15.66■□□□□ 0.1
Herc4-208ENSMUST00000219577 Mapkbp1Q6NS57 1503 aa15.66■□□□□ 0.1
Herc4-208ENSMUST00000219577 Spryd3E9Q9B3 442 aa15.65■□□□□ 0.1
Herc4-208ENSMUST00000219577 Ksr2Q3UVC0 959 aa15.65■□□□□ 0.1
Herc4-208ENSMUST00000219577 Gas2l2Q5SSG4 860 aa15.65■□□□□ 0.1
Herc4-208ENSMUST00000219577 Cdc42bpaQ3UU96 1719 aa15.65■□□□□ 0.1
Herc4-208ENSMUST00000219577 Prdm16A2A935 1275 aa15.65■□□□□ 0.1
Herc4-208ENSMUST00000219577 Puf60Q3UEB3 564 aaKnown RBP15.65■□□□□ 0.1
Herc4-208ENSMUST00000219577 EspnQ9ET47 871 aa15.65■□□□□ 0.1
Herc4-208ENSMUST00000219577 Sart3Q9JLI8 962 aaKnown RBP15.64■□□□□ 0.09
Herc4-208ENSMUST00000219577 Map3k4O08648 1597 aa15.63■□□□□ 0.09
Herc4-208ENSMUST00000219577 Gm6268A2A3U9 297 aa15.63■□□□□ 0.09
Herc4-208ENSMUST00000219577 Kank1E9Q238 1360 aa15.63■□□□□ 0.09
Herc4-208ENSMUST00000219577 ErbinQ80TH2 1402 aa15.62■□□□□ 0.09
Herc4-208ENSMUST00000219577 Rab3gap2Q8BMG7 1366 aa15.61■□□□□ 0.09
Herc4-208ENSMUST00000219577 Eif2s2Q99L45 331 aaKnown RBP15.61■□□□□ 0.09
Herc4-208ENSMUST00000219577 Mink1Q9JM52 1308 aa15.61■□□□□ 0.09
Herc4-208ENSMUST00000219577 Atp10dQ8K2X1 1416 aa15.6■□□□□ 0.09
Herc4-208ENSMUST00000219577 PtprgQ05909 1442 aa15.59■□□□□ 0.09
Herc4-208ENSMUST00000219577 Cpsf1Q9EPU4 1441 aaKnown RBP15.59■□□□□ 0.09
Herc4-208ENSMUST00000219577 Nsd2Q8BVE8 1365 aa15.59■□□□□ 0.09
Herc4-208ENSMUST00000219577 Lrriq1Q0P5X1 1673 aa15.59■□□□□ 0.09
Herc4-208ENSMUST00000219577 Mbd5B1AYB6 1498 aa15.59■□□□□ 0.09
Herc4-208ENSMUST00000219577 Tsen2Q6P7W5 460 aa15.59■□□□□ 0.09
Herc4-208ENSMUST00000219577 Dnai1Q8C0M8 701 aa15.59■□□□□ 0.09
Herc4-208ENSMUST00000219577 Lrrc9Q8CDN9 1456 aa15.58■□□□□ 0.08
Herc4-208ENSMUST00000219577 Ttc21bQ0HA38 1315 aa15.57■□□□□ 0.08
Herc4-208ENSMUST00000219577 Tarbp1E9Q368 1579 aa15.57■□□□□ 0.08
Herc4-208ENSMUST00000219577 GsdmaQ9EST1 446 aa15.56■□□□□ 0.08
Herc4-208ENSMUST00000219577 Tmco5bQ80X59 307 aa15.56■□□□□ 0.08
Herc4-208ENSMUST00000219577 Birc3O08863 600 aa15.55■□□□□ 0.08
Herc4-208ENSMUST00000219577 Ak7Q9D2H2 614 aa15.55■□□□□ 0.08
Herc4-208ENSMUST00000219577 AI481877A2ALV5 1481 aa15.55■□□□□ 0.08
Herc4-208ENSMUST00000219577 Dot1lQ6XZL8 1540 aa15.55■□□□□ 0.08
Herc4-208ENSMUST00000219577 NudcO35685 332 aaKnown RBP15.55■□□□□ 0.08
Herc4-208ENSMUST00000219577 Shq1Q7TMX5 569 aa15.55■□□□□ 0.08
Herc4-208ENSMUST00000219577 Nutm1Q8BHP2 1126 aa15.55■□□□□ 0.08
Herc4-208ENSMUST00000219577 Iqcf3Q9D498 203 aa15.55■□□□□ 0.08
Herc4-208ENSMUST00000219577 1700019A02RikA0A087WPV9 146 aa15.54■□□□□ 0.08
Herc4-208ENSMUST00000219577 NgefQ8CHT1 710 aa15.54■□□□□ 0.08
Herc4-208ENSMUST00000219577 Znf608Q56A10 1511 aa15.54■□□□□ 0.08
Herc4-208ENSMUST00000219577 Mbd3Q9Z2D8 285 aaKnown RBP15.53■□□□□ 0.08
Herc4-208ENSMUST00000219577 Mapk8ip3Q9ESN9 1337 aa15.53■□□□□ 0.08
Herc4-208ENSMUST00000219577 KarsQ99MN1 595 aaKnown RBP15.52■□□□□ 0.08
Herc4-208ENSMUST00000219577 Lamc1P02468 1607 aaKnown RBP15.52■□□□□ 0.07
Herc4-208ENSMUST00000219577 Plekhh1Q80TI1 1356 aa15.52■□□□□ 0.07
Herc4-208ENSMUST00000219577 Vsig10D3YX43 558 aa15.51■□□□□ 0.07
Herc4-208ENSMUST00000219577 Utp14aQ640M1 767 aaKnown RBP15.51■□□□□ 0.07
Herc4-208ENSMUST00000219577 Zmym4A2A791 1549 aaKnown RBP15.51■□□□□ 0.07
Herc4-208ENSMUST00000219577 Nectin2P32507 530 aa15.5■□□□□ 0.07
Herc4-208ENSMUST00000219577 Edc4Q3UJB9 1406 aaKnown RBP15.5■□□□□ 0.07
Herc4-208ENSMUST00000219577 Q9D9H8 365 aa15.49■□□□□ 0.07
Herc4-208ENSMUST00000219577 Ppm1gQ61074 542 aa15.49■□□□□ 0.07
Herc4-208ENSMUST00000219577 DroshaQ5HZJ0 1373 aaKnown RBP15.49■□□□□ 0.07
Herc4-208ENSMUST00000219577 Irx6Q9ER75 438 aa15.49■□□□□ 0.07
Herc4-208ENSMUST00000219577 Ipo8Q7TMY7 1010 aa15.48■□□□□ 0.07
Herc4-208ENSMUST00000219577 Adgrl2Q8JZZ7 1487 aa15.47■□□□□ 0.07
Herc4-208ENSMUST00000219577 Fmn2Q9JL04 1578 aa15.47■□□□□ 0.07
Herc4-208ENSMUST00000219577 Rusc2Q80U22 1514 aa15.47■□□□□ 0.07
Herc4-208ENSMUST00000219577 U2surpQ6NV83 1029 aaKnown RBP15.47■□□□□ 0.07
Herc4-208ENSMUST00000219577 Fam208aQ69ZR9 1610 aaKnown RBP15.46■□□□□ 0.07
Herc4-208ENSMUST00000219577 Mfap1aC0HKD8 439 aaKnown RBP15.46■□□□□ 0.07
Herc4-208ENSMUST00000219577 Mfap1bC0HKD9 439 aaKnown RBP15.46■□□□□ 0.07
Herc4-208ENSMUST00000219577 Ralbp1Q62172 648 aa15.46■□□□□ 0.07
Herc4-208ENSMUST00000219577 Ppp1r18Q8BQ30 594 aa15.46■□□□□ 0.07
Herc4-208ENSMUST00000219577 Pibf1E9Q6K3 756 aa15.46■□□□□ 0.06
Herc4-208ENSMUST00000219577 Ccdc60Q8C4J0 545 aa15.45■□□□□ 0.06
Herc4-208ENSMUST00000219577 Ythdc2B2RR83 1445 aaKnown RBP15.45■□□□□ 0.06
Herc4-208ENSMUST00000219577 Trpm2Q91YD4 1506 aa15.44■□□□□ 0.06
Herc4-208ENSMUST00000219577 Abcc1O35379 1528 aa15.43■□□□□ 0.06
Herc4-208ENSMUST00000219577 Dusp27Q148W8 1138 aa15.42■□□□□ 0.06
Herc4-208ENSMUST00000219577 Ppp1r3fQ9JIG4 799 aa15.42■□□□□ 0.06
Herc4-208ENSMUST00000219577 Trim58Q5NCC9 485 aa15.42■□□□□ 0.06
Herc4-208ENSMUST00000219577 Abcc6Q9R1S7 1498 aa15.42■□□□□ 0.06
Herc4-208ENSMUST00000219577 Pbrm1Q8BSQ9 1634 aaKnown RBP15.41■□□□□ 0.06
Herc4-208ENSMUST00000219577 Stard8Q8K031 1019 aa15.41■□□□□ 0.06
Herc4-208ENSMUST00000219577 CenpjQ569L8 1344 aa15.41■□□□□ 0.06
Herc4-208ENSMUST00000219577 Kdm5cP41230 1554 aa15.41■□□□□ 0.06
Herc4-208ENSMUST00000219577 Ccdc183A2AJB1 534 aa15.41■□□□□ 0.06
Herc4-208ENSMUST00000219577 Dnmt1P13864 1620 aaKnown RBP15.41■□□□□ 0.06
Herc4-208ENSMUST00000219577 Cald1E9QA15 768 aaKnown RBP15.4■□□□□ 0.06
Herc4-208ENSMUST00000219577 Uspl1Q3ULM6 1089 aa15.4■□□□□ 0.06
Herc4-208ENSMUST00000219577 Atp2b2Q9R0K7 1198 aa15.4■□□□□ 0.06
Herc4-208ENSMUST00000219577 Smc5Q8CG46 1101 aaKnown RBP15.39■□□□□ 0.05
Herc4-208ENSMUST00000219577 Ccar1Q8CH18 1146 aaKnown RBP15.39■□□□□ 0.05
Herc4-208ENSMUST00000219577 Gm16486A0A1D5RMD1 1434 aa15.39■□□□□ 0.05
Herc4-208ENSMUST00000219577 Ylpm1Q9R0I7 1386 aaKnown RBP15.39■□□□□ 0.05
Herc4-208ENSMUST00000219577 GorabQ8BRM2 368 aa15.39■□□□□ 0.05
Herc4-208ENSMUST00000219577 Ak9G3UYQ4 1894 aa15.39■□□□□ 0.05
Herc4-208ENSMUST00000219577 Kif21bQ9QXL1 1668 aa15.38■□□□□ 0.05
Herc4-208ENSMUST00000219577 Irx3P81067 507 aa15.37■□□□□ 0.05
Herc4-208ENSMUST00000219577 Afap1Q80YS6 731 aa15.37■□□□□ 0.05
Herc4-208ENSMUST00000219577 Pnmal2G3X9N3 661 aa15.37■□□□□ 0.05
Herc4-208ENSMUST00000219577 DekQ7TNV0 380 aaKnown RBP15.37■□□□□ 0.05
Herc4-208ENSMUST00000219577 Sox12Q04890 314 aa15.36■□□□□ 0.05
Herc4-208ENSMUST00000219577 Rlbp1Q9Z275 317 aa15.36■□□□□ 0.05
Herc4-208ENSMUST00000219577 AatkQ80YE4 1365 aa15.36■□□□□ 0.05
Herc4-208ENSMUST00000219577 Tulp4Q9JIL5 1547 aa15.36■□□□□ 0.05
Herc4-208ENSMUST00000219577 Duxf3A0A0N4SV92 674 aa15.35■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms