RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Bicd2Q921C5 820 aa11.43□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Nutm1Q8BHP2 1126 aa11.42□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Mink1Q9JM52 1308 aa11.42□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Arid4aF8VPQ2 1261 aaKnown RBP11.42□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Ankrd36D3Z4K0 1415 aa11.42□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 PogkQ80TC5 607 aa11.42□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Ap3b2Q9JME5 1082 aa11.42□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Atl3Q91YH5 541 aa11.42□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Dixdc1Q80Y83 711 aa11.41□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Q9D2X8 372 aa11.41□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Crybg2B7ZCC2 1516 aa11.41□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 WrnO09053 1401 aa11.41□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Ric3Q8BPM6 367 aa11.41□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Gm21969J3QJZ1 289 aa11.41□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Usp16Q99LG0 825 aa11.4□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Smc3Q9CW03 1217 aaKnown RBP11.4□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Slc4a2P13808 1237 aaKnown RBP11.4□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Tpm1P58771 284 aa11.4□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Shq1Q7TMX5 569 aa11.4□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Nol12Q8BG17 217 aa11.4□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 LrpprcQ6PB66 1392 aaKnown RBP11.4□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 AampJ3QN89 436 aa11.4□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Rnf214Q8BFU3 668 aaKnown RBP11.4□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Ftsj3Q9DBE9 838 aaKnown RBP11.4□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 FosbP13346 338 aa11.39□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Nek4Q9Z1J2 792 aa11.39□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Mad1l1Q9WTX8 717 aaKnown RBP11.39□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Ddx11Q6AXC6 880 aa11.39□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 PnisrA2AJT4 805 aaKnown RBP11.39□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Hmox1P14901 289 aa11.39□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Q7TT23 1179 aa11.39□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Cttnbp2B9EJA2 1648 aa11.39□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Isy1Q69ZQ2 285 aaKnown RBP11.38□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Tnpo1Q8BFY9 898 aaKnown RBP11.38□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Srek1Q8BZX4 494 aaKnown RBP11.38□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Plekhh1Q80TI1 1356 aa11.38□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 HdgfP51859 237 aaKnown RBP11.38□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Ipo4Q8VI75 1082 aa11.38□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Krt82Q99M74 516 aa11.38□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Stk11ipQ3TAA7 1072 aa11.37□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Dhx29Q6PGC1 1365 aaKnown RBP11.37□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Fam193aQ8CGI1 1231 aaKnown RBP11.37□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Rbm25B2RY56 838 aaKnown RBP11.37□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Kcnh8P59111 1102 aa11.37□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Vps53Q8CCB4 832 aa11.37□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Cc2d2aQ8CFW7 1633 aa11.37□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Cc2d2bA0A286YDU8 1405 aa11.37□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Ppp2r3aB2RXC8 1150 aa11.37□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Pnmal2G3X9N3 661 aa11.37□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Rec8Q8C5S7 591 aa11.36□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Atad2bE9Q166 1460 aaKnown RBP11.36□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Cux1P53564 1515 aa11.36□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Tpm4Q6IRU2 248 aa11.36□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Tpm2P58774 284 aa11.36□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Rnf20Q5DTM8 973 aa11.36□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Hnrnpul1Q8VDM6 859 aaKnown RBP11.36□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Usp48Q3V0C5 1052 aa11.36□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Smarca4Q3TKT4 1613 aaKnown RBP11.36□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Cplx1P63040 134 aa11.35□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Zfp444Q3TDV8 331 aaKnown RBP11.35□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Ccdc34Q3UI66 367 aa11.35□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Tdrd9Q14BI7 1383 aa11.35□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Cplx2P84086 134 aa11.35□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Kri1Q8VDQ9 704 aaKnown RBP11.35□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Hmgn5Q9JL35 406 aa11.35□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Neurod6P48986 337 aa11.35□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Cetn4Q8K4K1 168 aa11.35□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Zfp644E9QA22 1323 aa11.35□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Wdr78E9PYY5 807 aa11.35□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Ccdc173A0JLY1 547 aa11.34□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 A0A0U1RNP2 1173 aa11.34□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Fam13bQ8K2H3 851 aa11.34□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Swt1Q9DBQ9 907 aa11.34□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Gnai1B2RSH2 354 aa11.34□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 SkilQ60665 675 aa11.34□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Rbm10Q99KG3 930 aaKnown RBP11.34□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Gnai3Q9DC51 354 aa11.34□□□□□ -0.59
Prpf40a-201ENSMUST00000076313 Smc4Q8CG47 1286 aa11.33□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Hook1Q8BIL5 728 aa11.33□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 ScribQ80U72 1612 aa11.33□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Vps8Q0P5W1 1427 aa11.33□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 EzrP26040 586 aaKnown RBP11.33□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Gpatch3Q8BIY1 525 aa11.33□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Cyp46a1Q9WVK8 500 aa11.33□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Evc2Q8K1G2 1220 aa11.33□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Gm21190A0A0G2JGJ6 266 aa11.32□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 ErbinQ80TH2 1402 aa11.32□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Rab11fip3Q8CHD8 1047 aa11.32□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Ciz1Q8VEH2 845 aa11.32□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Gprasp1Q5U4C1 1347 aa11.32□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Ipo7Q9EPL8 1038 aaKnown RBP11.32□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Stk3Q9JI10 497 aa11.32□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Znhit6Q3UFB2 460 aaKnown RBP11.31□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 PhaxQ9JJT9 385 aaKnown RBP11.31□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Anp32eP97822 260 aaKnown RBP11.31□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Rsph4aQ8BYM7 716 aa11.31□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 A0A1L1SQF0 893 aa11.31□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Ppp2r1aQ76MZ3 589 aa11.31□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Sv2bQ8BG39 683 aa11.31□□□□□ -0.6
Prpf40a-201ENSMUST00000076313 Erc2Q6PH08 957 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 39.6 ms